Gracilinanus agilis (agile gracile opossum): 123235384
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Entry
123235384 CDS
T07702
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04064
NF-kappa B signaling pathway
gas04210
Apoptosis
gas04668
TNF signaling pathway
gas05200
Pathways in cancer
gas05202
Transcriptional misregulation in cancer
gas05203
Viral carcinogenesis
gas05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
123235384 (TRAF1)
04668 TNF signaling pathway
123235384 (TRAF1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
123235384 (TRAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123235384 (TRAF1)
05202 Transcriptional misregulation in cancer
123235384 (TRAF1)
05203 Viral carcinogenesis
123235384 (TRAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
123235384 (TRAF1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
TRAF3_RING
zf-C3HC4
TRAF2_zf
zf-C3HC4_2
zf-RING_2
DpdA
Motif
Other DBs
NCBI-GeneID:
123235384
NCBI-ProteinID:
XP_044517439
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All DBs
Position
2:323831067..323854929
Genome browser
AA seq
519 aa
AA seq
DB search
MSEDLSSSVKSSQMAENLTDTAPVGPHFIPDENEFPFGYPASICQGTPEPKYLCCGCHNV
LKKAQQTLCGHRYCAACLSWILRISKNPICSRCQEENPQTVGDESFLSEEKAFIDAAINK
EISELSVHCVISGCGWTGLMKNFETHVCGGVSLKDHKQTMPKIDTEEKDSLVPAEVQDRC
PFADIGCSFKGGQERVKEHEASSLSDHLRLLLELAIRGKAQWGPSRGPGASGHRHAALPE
PKATERNLSDLQLQGAVEVNGDLEADYFHAASSDSEEELVLQRFMKEKLLAELEEKLRVF
ENIVTVLNKEVEASHLAIAASVYQSGLTQDLILSLEQRVVDLQQTLTQKDLALTKLEQTL
HLLEEASYDGVYLWKITNFTRRCHESACGRTVSLFSPAFYTARYGYKLCLRIYLNGDGMG
KGTHLSLFIVVMKGKYDALLEWPFRNKVTFMLLDQNNREHVTDSFHPDLTSGSFQKPQGE
SNIASGRPMFFPLNKLQSSKHAYVKDDTLFLKCVIETNS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagacctgtcttcatctgtcaagagctcccagatggcagagaaccttactgat
actgcccctgtgggaccccactttatccctgatgaaaatgaattcccctttggataccct
gccagcatctgccagggtactcctgaacccaagtatttgtgctgtggctgccacaatgtt
ctgaagaaggcccagcagaccctatgtggccaccgctactgtgctgcctgtctctcctgg
atactgaggatcagcaagaaccctatctgttcaagatgccaggaggagaatccacagact
gtgggtgatgaaagttttttatctgaagagaaggctttcattgatgctgccattaataag
gaaatctctgagctgagtgtgcattgcgtgatttctgggtgtggctggactggcctcatg
aagaattttgagacacatgtatgtggaggagtctccttgaaggaccacaagcagaccatg
cccaagatcgacacagaagaaaaggacagtttggtaccagctgaggtccaggataggtgt
ccctttgcagacattggctgttccttcaagggtggccaggagagggtgaaggagcacgag
gcttcctcgctgagtgaccacctgaggctgctgctggagcttgcgatccgtgggaaggcc
cagtgggggcccagcagagggccgggggcctcgggccacagacacgctgccctgccagag
cccaaggccacggagaggaacctgtccgacctccagctgcagggagctgtggaggtcaac
ggggacctggaggccgactacttccatgctgcctcctcagactcggaggaagagctggtc
ctgcagaggttcatgaaggagaagctgctcgccgagctggaggagaagctgcgcgtgttt
gagaatatcgtgacagtcctgaacaaggaggtggaagcctcccacctggccatcgctgcc
tcggtgtaccagagcggactgacccaggacctcatcctgagcctggagcagagggttgtg
gatttgcaacagaccctgacccaaaaagaccttgccctgaccaagttggagcagaccctc
catcttctggaggaggcttcctatgatggcgtatacctttggaaaatcaccaactttacc
aggagatgtcatgagtctgcatgtggaaggacagtcagtctattctcaccagctttctac
actgcccgctatggctacaaattatgccttcggatctacctgaatggagatgggatggga
aaagggacacacctttctctctttattgtagttatgaaagggaaatatgatgctctcctg
gagtggcctttccggaacaaggtcacatttatgttgctggaccagaacaacagagagcat
gttactgattcctttcatccagacctgacctcaggctccttccagaaacctcagggggaa
agcaatatagccagtggtcgccctatgttcttcccgctgaataaactacaatcctctaaa
catgcctatgtgaaagatgacacactcttcctcaagtgtgttatagaaacgaactcataa
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