Gracilinanus agilis (agile gracile opossum): 123235395
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Entry
123235395 CDS
T07702
Symbol
TNC
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04151
PI3K-Akt signaling pathway
gas04510
Focal adhesion
gas04512
ECM-receptor interaction
gas05165
Human papillomavirus infection
gas05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123235395 (TNC)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123235395 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123235395 (TNC)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
123235395 (TNC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123235395 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gas00536
]
123235395 (TNC)
Glycosaminoglycan binding proteins [BR:
gas00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123235395 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Pur_ac_phosph_N
EGF
DUF7949
hEGF
NDNF
fn3_2
Ig_ENGASE1_C
DUF4998
Motif
Other DBs
NCBI-GeneID:
123235395
NCBI-ProteinID:
XP_044517448
LinkDB
All DBs
Position
2:331446003..331525833
Genome browser
AA seq
2195 aa
AA seq
DB search
MGPLTQVLAYTIVALLSHSTQAGVLKRVIRHKRQSGINVTLPEENQPVVFNHVYNIKMPM
GSHCSVDLESASGEKELNPATELGEHFQEHTLNEENQIVFTHRINIPRRACGCAPAPDIK
ELLSRLEELEGLVSSLREQCTSGAGCCLQPAEGRLDTAPFCSGRGNYSTDSCGCVCEPGW
KGPNCSEPECPGNCNNRGQCIDGQCVCDEGFTGEDCGQLACPSDCNDQGKCVHGSCVCFE
GYTGEDCSEELCPVPCSEHGKCMNGQCICDEGFAGEDCKEPLCLNNCYNRGRCVENECVC
DEGFTGEDCSELICPNDCYDRGRCVNGTCYCELGFTGEDCGQLTCPNGCNNQGQCEEGQC
VCDEGFAGDDCSEKRCPEDCHNHGRCIDGQCECDDGFTGEDCGELKCPRDCSRHGRCVNG
QCVCDEGYTGEDCANRRCLNDCNNRGRCVHGKCVCEQGFTGYDCGDMSCPNDCHHQGRCV
NGMCVCDDGFMGEDCRDLRCPKDCNHRGICVAGKCKCQEGFAGEACGELACLNNCNNRGR
CVNGQCVCNEGFMGRDCSDLRCPNDCNNQGRCVEGKCVCHEGFGGEDCSQLSCLNNCNDW
GQCVGGRCICNEGYTGEDCSEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLVTYTPTNS
DGLEMQFRVPGDQTSTIIRELEPGVEYFIRVFAILENKKSIPVSARVATYLPAPEGLKFK
AIKETSVEVEWDPLDIAFETWEIIFRNMNKDDGAEITQSLRRPETTFRQTGLAPGQEYEI
SLHIVKNNTRGPGLKKIATTRLDAPSQLDVKDVTDTTALISWSKPLAEIDGIELSYGIKD
VPGDRTTIDLTHDDNQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFVTGLDAPRNLKR
ISQTDNSITLEWKNGKANIDNYRIKFAPISGGDHAEIEVPKSKQATTKTTLTGLRPGTEY
GIGVSAVKDDKESNPATINAATDMDAPKDLQISEPTETTLPLLWRRPLAKFDRYRLIYSS
STGQQKEVQLPADTTSYILRGLDPGTEYAINLVVEKGRHKSKPARVKGSTKEAPELGNLT
VTDVSWDALKLNWTAADGAYDNFVIQVQEANKLEEVQNLTVSGSLRAVDITGLQAATPYR
ITIYGVIQAYRTSPLSAETSTEETPKLAELTVSEVSWDSLKLNWTTTDGDYENFVIQVQE
ANQTLTIPGGQRSVHVTGLTAATLYRITIHGVILGFSTHPLSIQATTEEVPELGNLTVAK
VSWDSLKLNWTAADGAYETFVIKVQEANNLEEAQNLTVSGKLHSADVLGLQAETPYTITL
YGVIGGYTTEPLSAEATTEELPKLGELTVTNISWDALKLNWTTAEEAYDSFVIQVQEANK
LEEVQNLTVSGSLRAVDITGLQAATPYRITIYGVIQAYRTSPLSAEASTAKKLEIGDLKV
SSITPDSFNLSWTATDGAFEIFTIEIIDSNRLLEPLEYNISGTLRTAHISGLFPNTDFIV
YLSGIASGIGIQTISMATTTEALPLLENLTISDINPHGFTVSWMASENAFDSFLVIVVDS
GKLLDPQEFTLSGAQRKLELKGLITGIGYEVMLFGLAQGHQTKPLSAVVITEAEPEVDNL
LVSDATPDGFRLSWTADEGVFDSFVLKIRDTKKQSDPLEIIVPTHERTRDITGLKEGTEY
DIELYGLISGRRSQPVNAIATTAMGSPKEISFSDITENSATVSWTAPTSLVESFRITYVP
VEGGTPSVVTVDGSKTQTGLVRLMPGVEYLVSIISIKGFEESEPVTGTLTTALDGPSGLV
AANITDSEALAMWQPAIATVDSYVISYTGDRVPEVTQTVSGNTVEYALNDLEPATEYTLR
IFAEKGPQKSSIITTHFTTDLDSPRDLVATEVQSETALLKWRAPRAPVTGYLLIYESVDG
TIKEVILGPDTDTYSLTELSPSTHYTAKIQALKGALRSKLIQTIFTTIGLLYPYPKDCSQ
TMLNGETASGLYTIYINGDKTQALNVFCDMSSDGGGWIVFLRRSNGHQDFYQNWRTYAAG
FGKLGDEFWLGLDNIHKITNQGQYELRVDLRDHGETAYAIYDKFSVGDAKSRYKLKVDGY
SGTAGDSMAYHNGRFFSTYDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQG
VNWFHWKGHEHSIQFAEMKLRPSNFRNLEGRRKRA
NT seq
6588 nt
NT seq
+upstream
nt +downstream
nt
atggggcctctgacccaggtgttggcctacacgattgtagctctgttgtcccactctacc
caagcaggagttcttaagagagttatccgccacaagaggcagagcggcatcaatgtcacg
ttgccagaagagaaccagccagtcgtgtttaaccatgtctataacatcaagatgcccatg
ggttcccactgctcagtagacctagaatcagccagtggggagaaagaactgaaccctgca
actgagctaggcgaacatttccaagaacacactcttaacgaggagaatcaaatcgttttc
acacaccgaatcaatatcccccggcgggcatgtggctgtgcgccagctcccgacatcaag
gaactgctaagtcgactagaggagttggagggactggtgtcctcactacgggagcagtgt
accagtggggctggctgctgtctccagcctgcagaaggtcgcctggacactgcacccttc
tgcagtggtcgaggcaactacagtacagacagctgtggttgtgtgtgtgaaccaggctgg
aagggtcctaattgctctgagccagaatgtccgggaaattgcaacaacaggggtcagtgt
atcgatggacagtgtgtctgtgatgagggcttcactggtgaggactgtggccagctggcc
tgtcctagtgactgcaacgaccaaggcaagtgcgtccatggctcctgtgtctgtttcgag
gggtataccggggaggactgcagcgaggagctctgccctgtgccctgcagtgagcatggc
aaatgcatgaacgggcaatgcatttgtgatgagggcttcgctggtgaggactgcaaagag
cctctgtgccttaacaactgctacaaccgcgggcgctgtgtggagaacgagtgtgtgtgt
gacgagggtttcacgggtgaggactgtagcgagctcatctgccccaatgactgctatgac
cggggccgctgtgtcaatgggacctgctactgtgagttaggcttcaccggagaagactgt
gggcagctcacctgcccgaatggctgtaacaaccagggccagtgtgaggaagggcagtgt
gtttgtgatgaggggtttgctggcgatgactgtagtgaaaagcggtgtcccgaggactgc
cacaaccatggccgctgcattgacgggcagtgtgagtgtgatgatgggttcacaggggaa
gactgtggggaactcaagtgtccccgggactgcagcaggcacggccgctgtgtcaatggg
cagtgcgtttgcgatgagggctacactggggaggattgtgccaaccgccggtgcctcaat
gactgtaacaaccgcgggcgctgtgtccacgggaagtgtgtgtgtgagcaaggcttcaca
ggttatgactgtggagacatgagctgtcccaacgactgccaccatcaggggcgctgtgtg
aatgggatgtgcgtgtgtgatgatggcttcatgggggaagattgccgggatttgcggtgc
cccaaagactgtaaccaccgggggatttgcgtggctgggaaatgtaaatgccaggagggc
ttcgctggggaagcctgcggagagttagcttgcttaaataactgcaataaccggggccgt
tgcgtgaatggacaatgcgtttgcaacgagggtttcatggggagagactgcagcgaccta
agatgtccaaacgactgtaacaaccaagggcgctgtgtggaaggcaaatgcgtctgccac
gagggatttggaggagaagactgcagtcagctttcctgcctgaacaactgtaatgactgg
ggtcagtgtgtcggcgggcgctgcatctgcaatgaaggctacactggcgaagattgttcg
gaggtgtccccaccaaaggacctcatagtgactgaagtgacagaagaaactgtaaacctg
gcatgggacaatgaaatgagggtcacagagtaccttgtcacctacactccgacaaactca
gatggtctggaaatgcagttccgtgtgcctggggaccagacatccaccatcatccgtgaa
ttagagccaggggtagaatactttatccgagtctttgctatccttgagaacaagaaaagc
atccctgtcagtgcaagggtggctacttacctgcctgccccagaaggcttgaaattcaaa
gctatcaaagagacatcagtggaagtggagtgggatcctctagacattgcttttgaaacc
tgggaaattatcttccgcaacatgaataaggatgatggagcagaaatcacccaaagcctg
aggaggccagaaacaactttcagacagactggcctggctccaggacaggagtatgagata
tctctgcatattgtgaaaaacaacacccgtggcccaggcctgaagaaaatagcaaccaca
cgtctggatgctcccagccagctagatgtaaaagatgtcacagacaccactgctctaatc
agctggtctaaacccttagctgaaattgatggcattgaactctcctatggtatcaaagat
gttccaggtgatagaacaactatcgatctcactcatgatgacaaccagtattccattgga
aatctgaaacctgatacagaatatgaagtgtccctcatctctcgaagaggagacatgtca
agcaacccagccaaagaaacctttgtaacaggtctggatgcccctcgaaatctaaaacgc
atctcccagactgacaacagcatcaccttagagtggaagaatggcaaggctaatattgac
aattatcggatcaagtttgctcccatttctggaggagaccatgcagagattgaagtgcca
aagagcaaacaggctacaaccaaaaccacactcacaggtctgagacctggcactgaatat
ggcattggagtgtcggccgtgaaagatgataaggaaagcaatcctgccaccatcaatgct
gccacagatatggatgcccccaaggaccttcagatttcagagcctacagaaaccactttg
cccctgctctggagaagacctctggccaaatttgaccgataccgcctgatctacagttct
tccacgggacagcaaaaggaagtccagttaccagcagacaccacctcttacattctgaga
ggtctggatcctggcactgaatatgccatcaaccttgtggttgaaaaaggacggcataag
agcaagccagcccgtgtgaaaggttcaacaaaggaggcaccagagctcggaaaccttacc
gtgacagatgttagctgggatgccctcaaactcaactggacagcagcagatggggcttat
gacaactttgtcattcaggtgcaggaggccaacaagttggaagaggttcagaatctcaca
gtgtctggcagcctgagagctgtggatatcacaggcctccaagctgccactccttataga
atcaccatctatggggtgattcaggcctacagaaccagccccctttctgctgaaacctcc
acagaagaaactcccaagctggcagagttaaccgtatcagaggttagctgggattctctc
aaactcaactggaccaccactgatggagactatgagaactttgttattcaggtgcaagag
gctaaccagactcttaccatcccaggaggacaaagatctgtgcatgtgactggcctcaca
gctgccaccctttatagaatcaccatccatggggtgattctaggctttagcacacaccct
ctttctattcaagccaccacagaagaggttccagagctggggaatctcacagtggccaag
gttagctgggattcccttaaactcaactggactgcggccgatggggcctatgagaccttt
gtcattaaggtgcaggaggctaacaatttggaggaagcccagaatctcacagtgtctggc
aaacttcattctgctgatgttcttggccttcaagctgaaaccccttacactattaccttg
tacggtgtgattgggggctacactactgaacctctttctgctgaagccaccacagaggaa
ctccctaagctgggagagttaactgtgacaaatattagctgggatgccctcaaactcaac
tggaccacagcagaggaagcctatgacagctttgtcattcaggtgcaggaggctaacaag
ttggaagaggttcagaatctcacagtgtctggcagcctgagagctgtggatatcacaggc
ctccaagctgccactccttatagaatcaccatctatggggtgattcaggcctacagaacc
agccccctttctgctgaagcttctacagcaaagaaactagaaattggggacttaaaggtt
tccagcatcacccctgatagtttcaacctctcctggacagcaacagatggagcttttgag
atctttaccattgaaattattgattccaataggttgttggagcctctggaatacaatatc
tctggcactttaaggactgctcatatctcagggctcttccccaatactgactttattgtc
tacctctctgggatagcatctggtatcggtattcaaaccataagtatggcaactacaaca
gaggctctgcccctactggaaaacttaaccatttccgacattaatcctcatgggttcact
gtttcctggatggcatcggagaatgcctttgacagctttctagtaatcgtggtggattct
ggcaagctgctggacccccaggagttcacactttcaggagcccagaggaaactggagctt
aaaggcctcataactggcattggctatgaggttatgcttttcggcttggcccaagggcac
caaacaaagcctttgagtgctgtggttattacagaagcagaaccagaagtcgacaacctt
ctggtttcagatgccaccccagatggtttccgtctatcttggacggcagatgaaggggtc
ttcgatagttttgttcttaaaatcagggatactaaaaagcagtctgatccactggaaata
attgtaccaacccatgagcgtaccagggacataacaggtctcaaagagggcacagaatat
gacattgaactctatggattaatcagtggacgacgatcccagccagtcaatgccattgca
accacagccatgggttcaccaaaagaaatctctttctccgacatcactgaaaactctgcc
actgttagctggacagcacccacttcactggtggagagcttccggatcacatatgtccct
gtggaaggaggaacaccttcagtggtgacagtggatggaagcaagactcagactgggctg
gtgagactgatgcctggagtggagtatcttgtgagcatcatctcaatcaaaggctttgag
gaaagtgagcctgtaacagggactctcacaacagctcttgatggcccatcaggcttggta
gcagctaatatcactgactctgaagccctagccatgtggcagccagccattgctactgtg
gacagctatgtcatctcctacactggggacagagtgccagaagtgactcaaacagtatct
ggaaatacagtggaatatgctttgaatgaccttgagcctgcaacagagtacacgctaagg
atctttgcagagaaggggcctcagaaaagttccataatcaccactcatttcacaacagac
ctagattctccaagagatttggtggcaactgaggttcaatcagaaactgcactgttaaaa
tggagggctcctcgtgcacctgtcaccggttatctcctcatctatgagtctgtggatgga
accatcaaggaagtcatcctgggacctgacacagacacctacagcctcacagagctgagc
ccttccacgcactacacagccaagatccaggccttgaagggagccctgaggagcaagctc
attcagaccattttcactacaattggactcctctacccatatcccaaggactgttcacaa
acaatgctgaatggggaaacagcctctggcctctatactatctatattaatggggataag
acccaggcactaaatgtcttctgtgacatgagctctgatggaggtggatggattgtattt
ctgagacgtagtaatggacatcaagatttctaccagaattggaggacctatgctgctgga
tttgggaaacttggagatgaattttggcttgggctggataacattcacaaaatcactaac
cagggacagtatgaattaagggtggacctccgggatcatggtgagacagcttatgccatc
tatgataaattcagtgttggagatgccaagtcccgctataagctaaaagtggatggatac
agtggaacagcaggtgattccatggcctaccacaatggaaggttcttctctacatatgat
aaggacacagattcagccatcacaaattgtgctctctcctacaagggagctttctggtac
aagaattgccaccgagtcaaccttatgggccggtatggtgacaacaatcatagtcaggga
gttaactggttccactggaagggccatgagcactcaattcagtttgctgaaatgaagcta
agacccagcaacttccggaacctagaaggcagaagaaaacgggcataa
DBGET
integrated database retrieval system
