Gracilinanus agilis (agile gracile opossum): 123237194
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Entry
123237194 CDS
T07702
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04010
MAPK signaling pathway
gas04064
NF-kappa B signaling pathway
gas04071
Sphingolipid signaling pathway
gas04137
Mitophagy - animal
gas04141
Protein processing in endoplasmic reticulum
gas04210
Apoptosis
gas04217
Necroptosis
gas04380
Osteoclast differentiation
gas04621
NOD-like receptor signaling pathway
gas04622
RIG-I-like receptor signaling pathway
gas04657
IL-17 signaling pathway
gas04668
TNF signaling pathway
gas04920
Adipocytokine signaling pathway
gas04932
Non-alcoholic fatty liver disease
gas05010
Alzheimer disease
gas05014
Amyotrophic lateral sclerosis
gas05016
Huntington disease
gas05017
Spinocerebellar ataxia
gas05022
Pathways of neurodegeneration - multiple diseases
gas05132
Salmonella infection
gas05135
Yersinia infection
gas05160
Hepatitis C
gas05163
Human cytomegalovirus infection
gas05167
Kaposi sarcoma-associated herpesvirus infection
gas05168
Herpes simplex virus 1 infection
gas05169
Epstein-Barr virus infection
gas05170
Human immunodeficiency virus 1 infection
gas05200
Pathways in cancer
gas05203
Viral carcinogenesis
gas05222
Small cell lung cancer
gas05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123237194 (TRAF2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
123237194 (TRAF2)
04064 NF-kappa B signaling pathway
123237194 (TRAF2)
04668 TNF signaling pathway
123237194 (TRAF2)
04071 Sphingolipid signaling pathway
123237194 (TRAF2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
123237194 (TRAF2)
09143 Cell growth and death
04210 Apoptosis
123237194 (TRAF2)
04217 Necroptosis
123237194 (TRAF2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
123237194 (TRAF2)
04622 RIG-I-like receptor signaling pathway
123237194 (TRAF2)
04657 IL-17 signaling pathway
123237194 (TRAF2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
123237194 (TRAF2)
09158 Development and regeneration
04380 Osteoclast differentiation
123237194 (TRAF2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123237194 (TRAF2)
05203 Viral carcinogenesis
123237194 (TRAF2)
09162 Cancer: specific types
05222 Small cell lung cancer
123237194 (TRAF2)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
123237194 (TRAF2)
05160 Hepatitis C
123237194 (TRAF2)
05168 Herpes simplex virus 1 infection
123237194 (TRAF2)
05163 Human cytomegalovirus infection
123237194 (TRAF2)
05167 Kaposi sarcoma-associated herpesvirus infection
123237194 (TRAF2)
05169 Epstein-Barr virus infection
123237194 (TRAF2)
09171 Infectious disease: bacterial
05132 Salmonella infection
123237194 (TRAF2)
05135 Yersinia infection
123237194 (TRAF2)
09164 Neurodegenerative disease
05010 Alzheimer disease
123237194 (TRAF2)
05014 Amyotrophic lateral sclerosis
123237194 (TRAF2)
05016 Huntington disease
123237194 (TRAF2)
05017 Spinocerebellar ataxia
123237194 (TRAF2)
05022 Pathways of neurodegeneration - multiple diseases
123237194 (TRAF2)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
123237194 (TRAF2)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
123237194 (TRAF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123237194 (TRAF2)
04121 Ubiquitin system [BR:
gas04121
]
123237194 (TRAF2)
Enzymes [BR:
gas01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123237194 (TRAF2)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123237194 (TRAF2)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
123237194 (TRAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-RING_6
zf-C3HC4_4
zf-C3HC4_2
Thioredoxin_3
Sina_ZnF
MATH
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
123237194
NCBI-ProteinID:
XP_044519865
LinkDB
All DBs
Position
2:complement(270331221..270369405)
Genome browser
AA seq
523 aa
AA seq
DB search
MATANSTPPGSLDLLQPGFSKDILGTKLEDKYLCSACKNILRRPFQAQCGHRYCSYCLTS
IISTGPQNCAACIQEGIYEEGISILESSSAFPDNAARREVESLPAVCVNDGCTWKGTIKE
YESGHEGHCPSMLIECPACKWMIKLGEKEHHSERECPKRSLNCRYCKVLFYYPDIKAHDE
ICPKFPLTCEGCGKKKILREKFQDHVKACGKCKGPCKFHVVGCTEMVENEKQQDHENQKV
AEHLCMLLNFVLEARHFHGDIGPLLGQGDMGGWGNNSLALGPEMSKSTELLERCETLERK
TVTFENIVCVLNREVERVSMTAEACSRQHRLDQEKIETLSSKVQQLERSIGLKDLAMADM
EQKILEMEASTYDGIFIWKITDFARKRQEAMAGRSPAIFSPAFYTSKYGYKMCLRIYLNG
DGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQR
PVSDMNIASGCPLFCPVSKMESKNSYVRDDAIFIKAIVDLTGL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcaaactctactcctccaggctctttagatttgcttcagcctggattttca
aaggatatcttaggaacaaaattagaagataaatatctttgttctgcatgcaaaaacatt
ttgagaagaccatttcaagctcagtgtggacatcggtactgctcttattgtctaaccagc
atcataagcactgggcctcagaattgtgctgcctgcattcaggagggcatatatgaagaa
ggcatttctattttagaaagcagttcggcttttccagataatgctgcccgaagagaggta
gaaagcctaccagctgtctgtgttaacgatggttgcacctggaaaggcactataaaagaa
tatgagagcggccatgaaggacactgcccatccatgctaatcgagtgcccagcatgtaag
tggatgatcaaactgggtgagaaggagcatcattctgagcgggaatgcccaaagagaagc
ctcaactgcagatactgcaaagttcttttctactatcctgatattaaggcccatgacgag
atctgtcccaagtttcccttgacttgtgaaggctgtggtaagaagaaaattctgcgagag
aaatttcaggaccatgtcaaggcctgtggcaaatgcaaaggtccatgcaaattccatgtt
gttggctgtactgaaatggtggaaaacgagaagcagcaagatcatgaaaatcagaaagta
gccgagcacctctgcatgttgttaaactttgtccttgaggccaggcatttccatggagac
attggtcccctccttggccaaggtgacatggggggctggggaaacaactcattggcctta
gggccagagatgtccaagtctacagagctgttggagagatgtgaaaccctggaaagaaaa
acagtcacttttgagaacattgtctgtgtcttgaaccgagaggtggagagagtgtccatg
acagctgaggcttgcagcaggcagcaccgcctggaccaggaaaaaattgaaactctcagt
agcaaggtccagcagctggaaaggagtataggattaaaagacctggcgatggctgacatg
gaacagaagatccttgagatggaagcttccacttatgatggaattttcatatggaagata
acagactttgctagaaaacgccaagaagccatggccggccgctctcctgccatcttctct
ccagccttctacacgagcaaatatggctataagatgtgtttgagaatttatctgaatggg
gatggcactggacgtgggacccacctttctcttttctttgtcgtgatgaaaggaccaaat
gatgcacttctacgttggccctttaatcaaaaggtgacattaatgctgctagatcagaac
aaccgggaacatgtgattgatgccttcaggcctgatgtgacatcttcctctttccaaagg
ccagtcagtgatatgaacattgccagtggctgtccccttttctgtcctgtctctaaaatg
gagtcaaagaattcttatgtgcgcgatgacgccattttcatcaaagccatcgtggatttg
acgggtctctaa
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