KEGG   Gracilinanus agilis (agile gracile opossum): 123245039
Entry
123245039         CDS       T07702                                 
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
  KO
K08131  collagen type IX alpha
Organism
gas  Gracilinanus agilis (agile gracile opossum)
Pathway
gas04151  PI3K-Akt signaling pathway
gas04510  Focal adhesion
gas04512  ECM-receptor interaction
gas04820  Cytoskeleton in muscle cells
gas04974  Protein digestion and absorption
gas05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:gas00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    123245039 (COL9A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    123245039 (COL9A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    123245039 (COL9A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    123245039 (COL9A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    123245039 (COL9A1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    123245039 (COL9A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:gas00535]
    123245039 (COL9A1)
Proteoglycans [BR:gas00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   123245039 (COL9A1)
SSDB
Motif
Pfam: Collagen Laminin_G_2 Laminin_G_1
Other DBs
NCBI-GeneID: 123245039
NCBI-ProteinID: XP_044529678
LinkDB
Position
4:complement(308965976..309087015)
AA seq 921 aa
MESSWKIPFFFFICCLGSWASATVQRNRRFPISLTPNPENDLCPAVRIGQDDLPGFDLIS
QFQVDKAAARAAIQRVTGSTALQVAYKLGNNVDFRIPTRHLYPNGLPEEYSFLTTFRMTG
STLKKNWSIWQIQDSLGKEQVGMKINGQMQSIAFSYKGLDGSLQTAAFSNTPILFDSQWH
KVMIGVERRSVTLFIDCKRIESLPIKPRGKIDVDGFAVLGKLIDNPQVSVPFELQWLLIH
CDPLRPRRETCHELPVRVNLPSLSNGERGPPGPQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPNGDPGKPGAPGLPGTPGADGLTGPDGSPGPIGSRGQKGEPGIPGSRGFPGRGIP
GPPGPPGASGLPGELGRVGPSGDPGRRGPPGPPGPPGPSGTIGLHDGDPLCPNSCPPGRS
GYPGLPGLRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGPQGLRGITGIVGAK
GDKGARGLDGEPGPQGLPGAPGDQGQRGPLGETGPKGDRGVQGPRGINGLPGPKGENGLP
GVDGRDGIPGMPGSKGEPGKPGPPGDIGRQGLPGLPGTPGAKGVAGEKGNSGAPGIPGLM
GNSGKPGQQGPQGEVGPRGPRGLPGSRGELGPSGPPGSPGKLGPLGSPGLPGLPGPAGLP
GLKGDRGSVGEPGPKGEQGSVGEEGEAGGKGELGDVGLPGSKGSVGNPGEPGLRGPEGSR
GLPGVEGSRGPPGPRGMQGERGATGLPGIQGPAGRAPTDQHIKQVCLRVMQEHLALMAAS
LKRPDSGASGLPGKPGPPGPPGPPGENGFPGQMGPRGLPGLKGPPGELGLRGPKGDLGER
GERGPPGRGPKGLPGSIGLPGDPGPASYGKEGRDGERGPPGPAGIPGVPGPPGPAGPPGF
CEPASCTVQAGQRAFSKGPDQ
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggagagcagttggaaaattccatttttcttcttcatatgttgcctgggatcttgggca
tctgcaactgtccagcgtaaccgaaggtttcccatttccttgactcctaatcctgagaat
gacctttgtccagcagtcaggattggccaggatgatttaccaggatttgacttaatttca
cagttccaggtagataaagcagcagctagagcagctatccagagagttacaggctcaaca
gctttacaggtggcttataaattgggaaataatgtagacttcaggatcccaaccagacat
ttatatcccaatggactacctgaagaatactcctttttaacaacttttcggatgactgga
agcactttgaaaaagaactggagcatctggcagatccaggattccttggggaaagagcaa
gttggcatgaagattaatggccaaatgcaatccattgcattttcctataaaggcctggat
ggcagcctccaaactgcagctttctcaaatacccctattttgtttgattcccaatggcat
aaagttatgattggtgtggaaaggaggagtgtcaccctctttattgactgcaaaagaatt
gaatccttacccataaagccaaggggaaagattgatgtggatggttttgctgtgctagga
aagctcatagataatcctcaggtttctgttccgtttgaactccagtggttgctgattcac
tgtgaccctttgagacccaggagagaaacatgccatgaacttccagtgcgggtaaatcta
ccaagcctgagcaatggggagagaggtcccccgggtccccaagggcctcctggtcctccc
ggtcccccaggagttccgggcatcgatggtatcgacggagatcgaggtccaaagggtccc
cctggccccccgggtcccaatggagacccaggaaaaccaggagctccgggcttacccggc
acaccaggtgcagatggcttgacaggacctgatggatcgcctggcccaattggttcaaga
ggacaaaaaggagagcctgggattccaggatcacgtggatttccaggtcgtggtattcct
ggaccacctggaccacctggggcatcaggacttcctggagaactcggtcgtgtgggacca
tctggggatcctgggagaagaggaccacctggcccaccaggtccaccaggacctagtgga
acaattgggcttcatgatggagatccattgtgtcccaattcctgtccaccaggtcgttca
ggatatccaggtctaccaggcttgaggggtcacaaaggggcaaagggagaaattggggaa
ccaggaagacaaggtcacaagggagaagaaggtgaccagggagaacttggagaagttgga
gctcaaggacctccgggtcctcaaggcttgagaggaataactggcatagtcggtgccaag
ggggacaaaggtgctcgtggtctcgatggtgagcctggacctcagggtctccccggtgca
ccgggtgatcaagggcagagaggaccactaggagaaacaggtcccaagggtgacagaggt
gttcagggtcctagaggaataaatggtctcccgggtcccaaaggagagaatggtctgcca
ggggtagatggccgagatggaatccctggaatgcctggatcaaagggtgaacctggaaaa
cctggtcctcctggtgatattggaaggcaggggcttcctggtttacctggaactcctggt
gcaaaaggtgttgctggtgaaaagggtaattctggtgctcctgggatacctggtcttatg
ggaaattcaggaaaaccgggtcaacaaggacctcaaggtgaagttggaccacgaggaccc
cggggactaccagggagtagaggagaattaggaccaagtggtcctccaggttcaccaggt
aaactgggtcctttgggcagcccaggccttccaggactgcctggtcccgctggactccct
ggattgaaaggagacaggggttcagttggcgagcctggtccaaaaggagaacaaggtagt
gtcggtgaagaaggtgaagcaggaggaaaaggagaactaggagatgtaggactgccaggc
tcaaagggatctgtggggaatcctggagagcctggtctaagagggcctgagggatcacgg
gggttgcctggggtagaaggatccagagggccccctggaccacggggcatgcagggtgaa
cgaggtgctacaggtcttcctggtatccaaggtccagcaggtagagcgccaacagatcag
catattaagcaggtttgcctaagagttatgcaagagcatctcgccctgatggctgctagc
ttgaagcgacctgactcaggtgcttctgggctaccaggaaagcctggaccaccaggtcct
ccaggaccccctggagagaatggttttccgggccagatgggaccccgtggcctcccaggt
cttaaaggtcctcctggtgaactgggtttgagaggcccaaaaggtgacttgggtgaaagg
ggtgagagaggacctcctggaagaggacccaaaggcttgccaggatcaattggtctccca
ggtgatccaggtccagcaagctatgggaaagaaggacgagatggagaacgaggtcctccc
ggtcctgcaggaattcctggggtccctggccctccaggtcctgctggtccccctggtttc
tgtgagccagcctcctgtacagttcaggctggccagcgtgctttcagcaaagggccagat
cagtga

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