Gracilinanus agilis (agile gracile opossum): 123246908
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Entry
123246908 CDS
T07702
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain
KO
K06238
collagen type VI alpha
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04151
PI3K-Akt signaling pathway
gas04510
Focal adhesion
gas04512
ECM-receptor interaction
gas04820
Cytoskeleton in muscle cells
gas04974
Protein digestion and absorption
gas05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123246908 (COL6A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123246908 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123246908 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123246908 (COL6A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
123246908 (COL6A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
123246908 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gas04147
]
123246908 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
gas00536
]
123246908 (COL6A3)
Exosome [BR:
gas04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123246908 (COL6A3)
Glycosaminoglycan binding proteins [BR:
gas00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123246908 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
123246908 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
VWA_3
Kunitz_BPTI
fn3
HC2
Motif
Other DBs
NCBI-GeneID:
123246908
NCBI-ProteinID:
XP_044531619
LinkDB
All DBs
Position
4:514081636..514150343
Genome browser
AA seq
2931 aa
AA seq
DB search
MRKHRHLPFVAIFCLLVSGFGLTDAQEAVQTGAAADIIFLVDSSWSIGQEHFQLVREFLY
DVIESLAGGGSDFRFALVQFNGNPHTEFLLNTYRTSREVLSHISNMTYLGGDSKTGRGLR
YVIQNHLTPAAGSRARDGVPQVIVVLTDGRSQDDVAAPSAELKSAAAVDVFAIGVQDAEE
GELKEMASEPLDLHVFNLENFTALHDIVGNLVACVRSSMVADIAGAPEIPKDITAQESAD
LIFLIDGSDKTGSAHFAAIRDFLVNLLERLSIGARQIQVGVVQYSNGPRTAFSLNSYSTK
ADVLDAVKALRVIGGEETNVGAALDFVVENHFTQAGGSRAEEGVPQVLVLISGSQSTDDI
RDGVVALKQASIFSFGLGAQGADRAELQHIATDENFVFTTPEFRSLGDLREYLLPYIVGV
AQRTIVLQPPTIVTQVIEVNKRDIVFLIDGTSTRGSANFNAIRDFIYKVVQKLEIGQDLI
QVAVAQYAHAVKPQFHFQDFHSRREVLSAIRRLRPINGSVLYTGAALDYVRNNFFNSSVG
YRATEGVPKLLVLITGGKSLDDISYPAQELKRSGIMAFAIGSPMADRTELEEVAFDPSLV
FVPAEFRPGPMQAILPGFLSPLRTLSGTTQVPVNKRDIIFLLDGSFNVGNANFPYVRDFV
MNLVNSLDVGYDTIRVGLVQFSDTPETEFSLDTYQSKSDLLARLRQLQLKGGSALNIGSA
LDFVRSNHFTEAGGSRIHENIPQLLLLLAAGHSGDSYLQASNALARAGVLTFCVGASQAN
KAELEQIAFNPSLVYLMDDFSSLPALPQQLIQPLTTYVSGGVEEVPLAPTEGQRDILFLF
DGSANLVGQFPAVRDFLYKIIDELNVKPDGTRIAVAQYSDNVKIESRFSDHQNKAEILNV
VKRMKIKTGKLLNMGQALDFAQRNLFVKSSGSRIEEGVPQFLVLLAAGRSSDRVDGPAQN
LRQVGIIPFIFQAKNADPAELERIVPSPAFILAAESLPKIGELQPQIVNLLKTVQNGGPL
QGMKDIVFLIDGSEGVRSGFSLLKDFVLKVVESLDVGPDRVRVAVVQFSERARPEFYLNS
YSDQQAVLNAIRQLSLLGGSSLNTGSALDFVMRNILVESAGSRIAEGVPQFLIVLSADRS
QDDIQGPSVVLKRSGAVPFGIGIGHSDNTEMRTISYTPDFATVIPTFQNLAYVQQLISEK
VILLTQEELQKIRPVLTPLASPAAGSKRDVVFLVDGSQNTVQEFSYVRALLESLIEELDV
GFDTTRVAVIQFSEDPRVEFLLNAHSSKDDVQAAVRRLRPKGGRQVNVGSALDYVSKNIF
RRPLGSRIEEGVPQFLVLVSSGRSTDDVEDSAAHIKEVGVAPLTVARNVDPEELVKISLS
PEYVFSVSTFRELPNLEQKLLTPITTLTAEQIKSIVRQTQHPRPDVESDAADIIFLVDTS
DSVRPEGLAHIRDFIGSIVRKLHIGPSRVRIGVAQFSNDVFPEFYLKTHKSQAAVLEAVR
RLRFRGGSPLNTGRALEFVAKNFFVKSAGSRIEDGVPQHLVLFLGGRSQDDVSRAARVLS
SSGIVSLGVGSRNVDRTELETIAGRDSRLVFTVREFRDLRNIENQVINSFGPSGVTPTPP
GPFSPSTPVAKKADIVFLLDGSINFKRDHFQEVLRFVSGIVDTIYEGGDSIQVGVVQYNS
DPTDEFFLKDFSTKEEIIDAINKVVYKGGREANTFVGLDHLRKNHFVPEAGSRIDQRIPQ
IAFVITGGSSVEDTEEATRALSQKGVKVFAVGVRNIDLREVSKIASNSAIAFRVSNVQEL
SELSEQVLETLHDAMHETLCPGVTDVSRACHLDVILGFDGSRDQNVFVSQRGLEAKVDAV
LNRITQLQRISCTGSQEPTVRVAAVAYTPSGPVEGFDFSDYQPDLFEKFQAMRNQHPYLL
TADTLKAYQNKFRSSPAGSVKVVIHFTDGIDGDLAALQRASAELQEEGVKALIFVGLERV
ANYDNVMQLEFGRGFTYNRPLAVSLMDLDYELAEQLGGGGTPGVPGDRGRPGPLGAKGEP
GDPGPKGGNGPRGPRGEMGDDGRDGIGLEGQKGKKGERGFPGYPGPKGAPGDRGGDGGPG
PKGSRGRRGNSGPPGAVGQKGDPGYPGPSGHKGNRGESVDQCSLIQSIKDKCPCCYGPLE
CPVFPTELAFALDTSQGVSQDSFSRMREVLLKIVGDLTIAESNCPRGARVAVVTYNNEVT
TEIRFPDSKRKSLLLDRIRNLQVPLTSKERSLETAMSFVARNTFKRARSGFLMRKVAVFF
SNGLVRASPQLNEAVLKLSDAGITPLFLTSREDRTLINALQINNTAVGHALVLPSGRNLN
DFLKNVLTCHVCLDICNPDQSCGFGSSRPAFRDRRAAGSDVDIDMAFILDSSETTTPFAF
NEMKKYIAYTVKQLDISPDPKMSQHLTRVAVLQHAPWEHEGNSSFPPARVELSLTDYGSK
DKLVDFLNNHMTLLPGTRALGNAIEYTIESIFESAPHPRDLKIVVLMVTGEVKKAELDDL
QRIIVQAKCKGYFFVVLGIGRNVNVKDVYSFASEPNDVFFKLAYKPTELNEEPLLRFARL
LPSFVNSENAFYLSPDVRKQCDWFQGDQPAKNPIKLGQRQMHIPNNATSVSTPKPVTTTK
PTTSATLPSVKQTPVKVHPQVPENPVAAHPFPVKQAPADPVPVKQAPAKPAPANPATVAR
PVASKPAAPKPVAAKPVATKPVTTKPLATKPQATKPLSSKPAVKTTREVHVSEITENSAR
LRWVNPDQPNPYIYDLTITSTHDRSVVLKQNLTVAERVIGGLVAGQTYHVAIVSYLKSQV
KGTYEGMFTTKKTQAPPPQPPKSASSATVNLMVNSEPWKGKEADVCKMPREIGTCRKFAL
RWFYDPKQQSCGRFWYSGCGSNGNNFETEADCEKTCMPAHVNPGVISTIGT
NT seq
8796 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcatcgacacttgccgttcgtggcaatattctgccttttagtctcaggtttc
gggctgaccgatgctcaagaggctgtccaaacgggtgccgctgcagatataatctttcta
gtggattcctcttggagcattggccaagaacacttccagctagtccgggagtttctctat
gatgttatagaatctttagctgggggaggaagcgatttccgctttgctctggtccagttc
aatggaaacccccacactgagttcctgctaaacacgtaccgtactagccgagaggtcctg
tcccatatttccaacatgacctacctggggggagacagcaagacgggcagaggcttacga
tacgtgatccagaaccatctgactccggctgccggaagccgggcgagggatggcgtcccc
caggtgatcgtagtgttaaccgacggacgatcccaggacgatgtggccgcgccttcggca
gaacttaagtccgccgctgccgtggacgtgtttgccattggcgtgcaggacgcggaggaa
ggagagctgaaggagatggccagtgaaccccttgatttgcatgttttcaacctagagaat
tttaccgccctccatgacatagtaggaaacttagtggcctgtgtccgttcctccatggtc
gcggacattgccggggctccagagatacccaaagacatcacagcgcaagaatctgctgac
cttattttccttattgatggatcagacaagactggaagtgcccattttgcagccattcga
gatttccttgtaaatctccttgagagactttccattggagctcggcagatccaagttggg
gtagtgcagtatagtaatgggcccagaaccgccttctctttgaacagctactccacaaag
gctgatgttctggatgcggtgaaggctcttagggtcattggtggtgaggagacgaatgtg
ggggccgccctggactttgtggtggagaaccacttcacccaggcgggaggcagcagagcg
gaggaaggggttccccaggtgttagtgctcataagcggctcccagtcgactgatgacatt
agagatggggtggtcgccttaaagcaagctagtatcttttcatttggccttggggcccag
ggtgccgacagggcagagctccagcacattgctaccgatgaaaatttcgtgtttaccacc
ccggaatttcgtagccttggcgacttacgagaatacttactgccctacattgttggagtg
gcccaaagaacaattgtgttgcagcccccaaccattgtcactcaagtcattgaagtcaac
aagcgagatatagtcttcctgatagatggcacttctacgcggggatcggccaacttcaat
gccatccgtgacttcatttacaaagtcgtccagaagctggaaatcggacaggatctgatt
caggtggccgtggcccagtacgcccacgccgttaagccgcagttccatttccaggacttc
cactccagaagggaggtcctcagcgccattcgcaggctgcggcccattaatggctcggtg
ctctacacgggggccgcccttgactacgtcaggaacaatttctttaatagttccgttgga
tatcgggccaccgaaggggttcccaaactcctcgtgttgatcacgggaggtaagtccctg
gacgacatcagctacccagcccaggaactgaagaggagcggcatcatggcctttgccatt
gggagcccaatggcagacagaacggagctagaagaggttgccttcgacccctccttggtg
ttcgtaccggcggaattccgacctgggcccatgcaagccatcctccctggctttctgtcg
cctttaagaactctttctggaaccacccaagttcctgtaaacaaaagggatatcatcttt
cttttggatggatcgttcaacgtgggaaacgccaacttcccttacgtgcgcgactttgta
atgaacttagtaaacagcctcgatgtgggctatgacactatccgggtcggtttagttcaa
tttagcgacactcccgaaaccgagttctccctagacacataccagtccaagtcagatttg
cttgctcgcctgcggcagctgcaactcaagggggggtccgctctgaacattggctcggcg
cttgattttgtgcgctccaatcatttcacggaagctggcgggagccggatccatgagaac
atccctcagctcctcctcctgctcgcggcggggcactcgggggattcttacttgcaagct
tccaatgctttagcccgagccggagtcctgaccttttgtgtgggtgctagccaggctaat
aaggcagaactcgagcagattgcgtttaatcccagcctggtctatcttatggatgatttc
agttccctaccagccctgccacagcagttgattcagcccctaaccacatatgttagtggc
ggtgtggaagaagttccacttgccccgacagaaggccagcgggacattcttttcctcttc
gatggctcagccaaccttgttggtcagttccctgcagtccgggacttcctctacaagatt
atcgatgagctcaacgtgaaacctgacggcactcggatagcggtagcccagtacagtgac
aatgtcaaaatcgagtcccgtttttctgaccaccagaacaaggcagagatcttgaacgtt
gtgaaacggatgaagatcaagacaggcaaacttctcaacatgggtcaggccctagacttt
gcccagaggaatcttttcgtgaagtcatctgggagtagaattgaggaaggagtgcctcag
ttccttgtccttctggcagctggaaggtcatctgaccgtgtggatggaccagcccagaac
ctgaggcaagttggcattatcccattcattttccaagcaaagaatgcagaccctgctgaa
ttagaaaggatcgtcccctcgcctgcctttatcctagctgccgagtctctgcccaagatc
ggagagcttcagccgcagattgtgaatctcttaaaaactgttcaaaatggcggaccatta
caaggtatgaaggacatcgtgtttctgattgacggctctgagggagtcagaagtggcttc
tctttactgaaggactttgttctgaaagtggtggagagcctggacgtgggccctgaccgg
gttagggtggccgtggtgcagttcagtgaacgagcccgacccgagttctacctgaactcc
tactcggaccaacaggctgtgctcaatgccatccgccagctctccttgctcggcggctcg
tccctcaacacgggctctgccctggacttcgtcatgaggaacatcctcgtggagtcggcg
gggagccgaattgccgagggcgtcccccagttcctgatcgtcctcagtgcagacaggtcc
caggacgacatccaagggccgtcggtggttctgaagaggagcggcgcagtgcccttcggc
atcggcatcggccattctgacaacaccgaaatgcgaaccatctcctacacccccgacttt
gccaccgtcatccccaccttccaaaatctcgcttacgtgcagcagctcatctcggaaaaa
gtgattctgctgacccaggaagagctgcagaagataaggccggtgctgacccccttggct
tccccagcggcgggcagcaagcgggacgtggtgttcctcgtggacgggtcccagaacacg
gtgcaggagttctcttacgtccgggccctgctcgagagtctcatcgaggagctggacgtg
ggcttcgacaccacgcgggtggcggtgatccagttcagcgaggaccccagggtcgagttt
ctgctgaacgcccacagcagcaaggacgacgtgcaggcggcggtgcggaggctgcgcccc
aagggcggccggcaggtcaacgtgggcagcgcgctggactacgtgtccaagaacatcttc
cggaggcccctgggcagccgcatcgaggagggggtgccgcagttcttggtgctcgtctcc
tcggggaggtccaccgacgacgtggaggactcggccgcgcacatcaaagaggtcggcgtg
gcccccctcaccgtggcccggaacgtggaccctgaagagctggtcaagatttctctgagt
cccgagtacgtgttctccgtgagcaccttcagggagctgccgaacctggagcagaagctc
ctgacccccatcaccacgctgaccgcggagcagataaagagcatcgtgaggcagacccag
cacccgagaccagacgtagaaagtgacgccgccgacatcatcttcctggtggacacctcg
gacagcgtccggccggaagggctggcccacatccgagacttcatcggcagcatcgtcagg
aagctccacatcgggcccagcagagtccggatcggtgtggcgcagttcagcaacgacgtc
ttcccagagttctacctgaagacccacaagtcccaggctgcggttctggaagccgtccgc
cgcctgaggttccgcgggggctccccgctcaacaccggccgagctctggagtttgtggcc
aagaacttctttgtgaagtcggcggggagcaggatagaagacggggtgccgcagcacctc
gtcctgttcctgggagggaggtcccaggatgacgtgtccagggccgcccgcgtgttgagc
tcgtccggcatcgtcagtttaggcgtgggatcccgcaacgtggacaggaccgagctggag
accatcgccggccgcgactccaggctcgtcttcaccgtcagagaattcagggatcttcgc
aacatcgagaaccaagtcattaattcatttgggccctcaggagtgactccgacgcctcct
ggcccgttttctccttcaaccccagtggcaaagaaagctgacattgtcttcctgttggat
ggctccatcaacttcaagagggaccacttccaggaagtcctccgatttgtctcggggata
gtggacaccatctacgaagggggagactccatccaggtgggcgtggtccagtacaactcc
gaccccaccgatgaattcttcctcaaggacttctccaccaaagaagagatcatcgacgcc
attaacaaagtggtctacaaaggtgggagggaagccaataccttcgtgggccttgaccac
ctgcggaagaaccactttgtgcccgaggccggcagtcggattgaccagcgaatccctcag
attgccttcgtgatcacgggagggagctccgtggaggacacggaggaagccacccgggcg
ctgtcccagaaaggggtcaaggtgtttgccgtgggagtgaggaacatcgacttgagggaa
gtatccaagatcgcttccaacagcgccatagctttccgcgtgagcaacgtccaggagctg
tccgagctgagcgagcaagtgctggaaaccctgcacgacgccatgcacgagaccttgtgt
cccggcgtgacggacgtctcccgagcgtgccacctggacgtgatcctcggcttcgacggc
tcccgagaccagaacgtgttcgtctcccagaggggcttggaggccaaggtggacgccgtc
ctgaatcgcatcacccagcttcagaggatcagctgcaccggcagccaggagcccaccgtg
cgggtggccgccgtggcctacacgccttcggggcctgtggagggcttcgacttctccgat
taccagcctgacctgttcgagaagttccaggccatgcgcaaccagcacccctacctcctg
acggcagacacgctgaaggcgtatcagaataagttcaggagttcccctgcgggcagcgtg
aaggtggtgattcacttcaccgacggcatcgatggagacctggctgcgctccaaagggca
tcggccgaattgcaagaggaaggtgtgaaggccctgatcttcgttggcctagaaagggtc
gccaactatgacaatgtgatgcagctcgaatttggtcgaggcttcacttacaatcggcct
ttggcagtgagcttgatggacctggactatgagttggcagaacagcttggaggtggtggg
acccctggagtccctggagatcgtggcagacctggtcccctgggagctaagggcgagcct
ggagatcctggtccaaagggaggaaatggaccacgtggacctcgaggagagatgggagat
gacgggcgagacggcataggccttgaaggacagaaaggcaaaaaaggagaacgtggattc
cctggatatccgggaccaaagggtgctcctggtgaccgaggtggggatggaggaccaggg
ccaaaaggaagcagaggccgccggggaaattcaggaccacctggagcagttggacagaag
ggagacccaggatacccaggaccatccggccataaaggcaacagaggagaatcagtcgat
caatgcagcctgattcagagcatcaaagacaaatgcccttgctgctacgggcccctggaa
tgcccagttttcccaacagaactcgccttcgctttagacacctcccaaggcgtcagtcaa
gattcttttagccggatgagggaggtccttctgaaaattgtgggcgatttgaccatcgcg
gagagcaattgtcctcgaggtgcccgggtggccgtagtgacctacaacaatgaggtgacc
acggagatccgcttccctgactccaagaggaagtccctgctcctggaccgcatccggaac
cttcaggtgcccttaacgtccaaggaacgcagcttggagaccgccatgtccttcgtggcc
aggaacaccttcaagagggctcgcagtggcttcctcatgaggaaggtggctgtcttcttc
agcaacggcctcgtccgggcctcccctcagctcaacgaggctgtgctcaagctgtccgat
gcaggaatcacacccttgttcctgaccagcagagaggatcggaccctcatcaatgcccta
cagatcaataacacagctgtgggccatgctctggttctcccctctggaaggaacctcaat
gacttcttgaagaacgtgctgacttgccatgtctgcttggatatatgtaatcctgaccag
tcgtgtggattcggcagctctcgaccggccttcagggacaggcgagctgcaggcagtgat
gtcgacattgacatggccttcatcttggacagctcagagaccacgaccccatttgcgttc
aatgagatgaagaaatacatcgcctacacagtcaagcagttggacatcagtcccgacccc
aagatgtcccagcacctcaccagagtggcagtcctccagcatgccccctgggagcatgaa
ggcaattccagcttccctcctgcccgtgtggagctctcattaactgattatggctccaag
gacaagctggtcgacttcctcaacaaccacatgaccctgttgcctgggaccagggctctg
gggaacgccattgagtacaccatagaaagcatctttgaaagtgcaccccaccctcgggac
ctaaagatcgtggtgctgatggtcaccggagaagtgaagaaggctgagctcgatgacctc
cagaggatcatcgtccaggccaagtgcaagggatacttcttcgttgtgctgggcattggc
cgaaacgtcaatgtcaaggacgtctacagctttgccagcgagcccaatgatgtcttcttc
aaactggcgtacaagcccacagagctaaatgaagagccgttactacgcttcgccaggcta
ttgccctcctttgtcaacagtgaaaatgcattttatttgtctccggatgtcaggaagcaa
tgtgattggttccaaggggaccagccagccaagaatcctatcaagttgggccaaaggcag
atgcacattcctaacaacgcgacctctgtttctacacccaagcctgtgactaccacgaaa
cccacaacttcagcaactctaccttctgtaaagcagacccctgtaaaagtgcaccctcag
gtccctgaaaatcctgtcgctgcccacccattccctgtgaagcaggcccccgctgaccca
gttcctgtaaagcaggccccggcaaaaccagccccagcaaacccagctacagtagcgagg
ccggttgcctcgaagccagctgctcccaagccagtcgccgctaagccagtggctacaaaa
cctgtgactacaaaaccactcgccacaaagccgcaggccacgaagccactgtcctccaag
ccagcagttaagaccaccagagaagtccacgtctctgagatcacggagaacagtgccagg
cttcgctgggtgaatcctgaccaacccaatccttatatttatgacctcaccatcacctcc
acgcacgaccgctctgttgtcctgaaacagaacctcactgtggccgaacgggtcattgga
ggactcgttgctggacagacatatcatgtagccattgtcagctacctgaaatcccaggtc
aaagggacctatgagggaatgttcactacaaagaagacccaggctccgccacctcagcca
ccaaagtcagcttcaagtgccacagtcaacctcatggtgaactctgagccatggaaaggg
aaggaagcagatgtctgcaagatgcccagggaaatcgggacttgccgcaagttcgccttg
aggtggttctacgaccctaagcaacagagctgcggccgcttctggtacagcggctgcggg
agcaacggcaacaacttcgagacggaggcggactgtgaaaagacctgtatgcctgcacac
gtcaatcctggagtcatttcaaccatagggacctaa
DBGET
integrated database retrieval system
