Gracilinanus agilis (agile gracile opossum): 123246932
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Entry
123246932 CDS
T07702
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain
KO
K06238
collagen type VI alpha
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04151
PI3K-Akt signaling pathway
gas04510
Focal adhesion
gas04512
ECM-receptor interaction
gas04820
Cytoskeleton in muscle cells
gas04974
Protein digestion and absorption
gas05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123246932 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123246932 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123246932 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123246932 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
123246932 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
123246932 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gas04147
]
123246932 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
gas00536
]
123246932 (COL6A2)
Exosome [BR:
gas04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123246932 (COL6A2)
Glycosaminoglycan binding proteins [BR:
gas00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123246932 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
123246932 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
DUF7939
Motif
Other DBs
NCBI-GeneID:
123246932
NCBI-ProteinID:
XP_044531640
LinkDB
All DBs
Position
4:complement(521143460..521170088)
Genome browser
AA seq
809 aa
AA seq
DB search
MAAGMLRALLLCGLLGALRAQQQQELVDIGTTERASNCPEKTDCPINVYFVLDTSESVTM
QAPIDSLLSQTQQFILQFTSELKNQHYRDQVALSWHYGGLHFSDEVEVFSALGSDEATFK
SRLQNIRSFRRGTFTDCAISNMTQEIRKNPSKSNFAIVITDGHVTGSPCGGIKMQAERAR
DLGIKLFAVALNQNRNEQGLRDVANLPHELYRNNYVTIKDDLSVDQDTIDKIIKAMKHEA
YSECYKVSCLQIQGPAGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKGV
PGLKGEKGEYGGDGRRGAAGLAGKNGTDGQKGKRGRIGPPGCKGDPGDRGLDGYPGEAGS
PGEQGDQGSKGDSGRPGRRGPPGLDGEKGNPGYQGNNGAPGSPGVKGAKGGPGPRGPRGE
QGRRGDPGAKGSPGNDGPKGEKVRRTRIGVVQYSHDGTFEAIKLDDERIGSLSQFKEEVK
KLEWIAGGTWTPSALNYTYNELIKGSRRKKTRVFAVVITDGRHDPRDNEQSLKALCDKVE
NVVVTAIGIGDMFNEQHESESLTSIACNQRGRVRNMTLFSDLVAEKFIDEMEEFLCPDPQ
IVCPDLPCQTELYVAQCTQRPVDIVFLLDGSERIGERNFHKAQRFVEDVAQRLTLARRHN
DPLNARVALLQYGNEREQEVIFPLTSNLTVIHNALSSARYLNSFSHVGTGIIHAINNIVM
DQQAGARRNAELSFVFITDGITGEASLNESLHSMRKQDVVPTVLALGGDVDMELLLKISL
GDRAAIFQEKDYDSLSQPGFFDRFIRWIC
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagggatgctccgcgcgctcctgctctgcggcctcctgggcgccctccgcgct
cagcagcagcaggaactcgtcgatatcggcaccacggagagagccagcaactgcccagag
aagaccgactgccccatcaacgtgtacttcgtgctggacacgtcggagagcgtgaccatg
caggcgcccatcgacagcctgctgagccagacgcagcagttcatcctccagttcaccagc
gagctgaagaaccagcactaccgggaccaggtggccctgagctggcactacggggggctg
cacttctccgacgaggtggaggtcttcagcgcgctgggcagcgacgaggccaccttcaag
tcgaggctgcagaacatccgctccttccgccggggcaccttcacggactgcgccatctcc
aacatgacccaggagataaggaagaacccgagcaagagcaacttcgccatcgtcatcacc
gacggccacgtcaccgggagcccgtgcgggggcatcaagatgcaggccgagcgcgcccgc
gacctgggcatcaagctcttcgcggtggccctcaaccagaaccggaacgagcagggcctc
cgcgacgtggccaacctcccccacgagctctaccgcaacaactacgtcaccatcaaggac
gacctgtccgtcgaccaggacaccatcgacaagatcatcaaggccatgaaacacgaagcc
tattccgagtgctacaaagtgagctgcctgcagattcaaggtcccgccggacccaagggc
tatcggggacagaagggtgccaaggggaacatgggggagccgggggagcccggacagaaa
gggcgacagggagacccgggcattgagggcccgatcggcttcccaggccccaagggggtt
cctggcctgaagggcgagaagggcgaatacggaggagacggacgcaggggcgctgcgggt
ctggcaggcaagaacgggacggacggacagaaggggaagcgaggacgcatcggaccccct
ggctgcaagggagaccccggggacaggggcctcgacggttacccaggggaagccggaagc
ccaggagagcagggagaccaaggcagcaagggagattccggccgcccaggacgccgaggg
ccccccggcctggatggagagaaaggaaacccgggttaccaaggcaacaacggagcccct
ggcagccccggggtgaaaggtgccaagggaggccccggaccccgaggaccccggggagag
cagggtcgtaggggagaccccggtgccaaaggcagccccgggaacgatgggcccaaagga
gaaaaggtgagaaggactcgcatcggagtggtccagtacagccacgacgggaccttcgag
gccatcaagctggacgacgagcgcatcggcagcctgagccagttcaaggaggaggtgaag
aagctcgagtggatcgcggggggcacgtggacgccgtccgccctcaactacacctacaac
gagctcatcaagggcagccggcgcaagaagacgcgcgtgttcgccgtggtcatcacggac
ggccggcacgacccccgcgacaacgagcagtcgctgaaggcgctctgcgacaaggtggag
aacgtggtggtgacggccatcggcatcggcgacatgttcaacgagcagcacgagagcgag
agcctgacgtccatcgcctgcaaccagaggggccgagtgcgcaacatgacgctcttctcc
gacctggtggccgagaagttcatcgacgagatggaggaattcctctgcccagacccgcag
attgtctgccccgaccttccctgccaaacagagctgtacgtagcccagtgcacccagcgg
cccgtcgacatcgtcttcctgctggacggctccgagcgcatcggggagcgcaacttccac
aaggcccagcgcttcgtggaggacgtggcccagaggctgaccctggcccggcggcacaac
gaccccctgaacgcgcgagtggccctcctgcagtacggcaacgagcgcgagcaggaggtc
atcttcccgctcacctccaacctgacggtgatccacaacgcgctgagcagcgcccgctac
ctcaactccttctcccacgtgggcaccggcatcatccacgccatcaacaacatcgtcatg
gaccagcaggcgggcgcccgccgcaacgccgagctctccttcgtcttcatcacggacggc
atcacgggggaggccagcctcaacgagtccctccactccatgcggaagcaggacgtcgtg
cccaccgtgctggccctgggcggcgacgtggacatggagctcctcctgaagatcagcctc
ggagatcgggccgccatcttccaggagaaggactacgacagcctctcccagcccggcttc
ttcgacaggttcatcagatggatctgctag
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