Gasterosteus aculeatus (three-spined stickleback): 120808158
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Entry
120808158 CDS
T07457
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03040
Spliceosome
gat04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120808158 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120808158 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gat03041
]
120808158 (snw1)
Spliceosome [BR:
gat03041
]
Complex B
Other components
Prp19-related factors
120808158 (snw1)
Complex C
120808158 (snw1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
120808158
NCBI-ProteinID:
XP_040016756
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All DBs
Position
XVIII:2479707..2486779
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AA seq
536 aa
AA seq
DB search
MSLTSFLPAPTQLSQDQLEAEEKLRAQKSYSTALVSSRKEPPLYETRKGWVPRSLEDFGD
GGAFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYDAIARQGQGKDKVIFSKYTDLL
PKEVLNDDTPELQKPDEEAIKELTEKTRSALDKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKSHGDKGGEDSEVRERDEIRHD
RRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGVPNPRSAGEAQYDQRLFNQSKGM
DSGFAGGEDETYNVYDQPFRGSRDMASNIYRPSKNVDKDAYTDNLESLMEKNRFVPDKEF
SGTDHGRGREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSTSSRSKDDYHDKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacgagtttcttgccggcgccgacccagctgtcccaggaccagctggaggca
gaggagaagctccgcgcccagaagtcctactccaccgccctggtttcgtctcgcaaggag
ccgccgctgtatgagaccagaaagggctgggtgccccgctcccttgaggatttcggagat
gggggagctttcccggagatccacgttgcccagtttcctctggagatgggaaggaagaag
aagacctccaatgccctggctgtacaggtggacgcagagggaaagatcaaatatgacgcc
attgccagacaaggacagggcaaggataaggtgatattcagtaagtacaccgaccttcta
cccaaggaagtccttaatgacgacactccagagctacagaagcccgacgaggaggccatt
aaagagctgacggagaagacccgcagtgcgctggacaagcaggtgtctcaaaagattgct
gctgccatgcctgtaagagctgcagacaaacaagctcctgcgcagtacatcagatacacg
ccgtcccagcagggagtggcttttaactctggggccaaacagagggtgatccgcatggtg
gaaatgcaaaaagatccaatggaacctccacgtttcaagattaacaagaagattcctcga
ggacctccttctccccccgcccctgtcatgcattcccccagcagaaagatgacagttaag
gagcagcaggaatggaagattcctccttgcatctccaactggaaaaacgccaagggctac
accattccgcttgataaacgtctggctgctgatggcagggggttgcaaactgttcacatc
aacgaaaactttgctaagctggccgaggcgctctacatcgcagatagaaaggccagagag
gcagtggagatgagagcccaggtggagaagaagatggcacagaaggagaaggagaagaag
gaggagaagctgagggaactggcccaaatggccagagaccgcagggcaggaatcaagagt
catggggacaaaggtggcgaggacagcgaggtcagggagcgtgatgagatccgccacgac
agaaggaaagagcggcagcacgacaggaacatttccagggcggctcctgataagaggtca
aagctgcagagggaccaggacagggacatcagcgagctcatcgctctgggcgttcccaat
cctcgctctgccggtgaggcccagtacgaccagcggctcttcaatcagagcaagggtatg
gatagcggttttgcaggcggcgaggatgagacctacaacgtgtacgaccagccgttccgc
ggcagcagagacatggcctctaacatctaccggcccagcaagaacgtggacaaggacgcc
tacacagataacttggaatccctcatggagaagaacaggtttgttccggacaaagagttc
tctggtaccgaccacgggcgcgggcgagaagggccggtccagtttgaggaggatcccttc
gggctggacaagttcttggaggaggccaagcagcacggcggctccaaaaggccgtccacc
agcagccgctccaaggacgactaccacgacaagaagcgcaggaaggagtga
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