Gasterosteus aculeatus (three-spined stickleback): 120821518
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Entry
120821518 CDS
T07457
Symbol
ubb
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-B
KO
K08770
ubiquitin C
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03320
PPAR signaling pathway
gat04120
Ubiquitin mediated proteolysis
gat04137
Mitophagy - animal
gat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120821518 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120821518 (ubb)
04137 Mitophagy - animal
120821518 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
120821518 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120821518 (ubb)
Ubiquitin system [BR:
gat04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120821518 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
120821518
NCBI-ProteinID:
XP_040036068
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All DBs
Position
VII:complement(17584917..17589911)
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AA seq
613 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGQXKNMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSEYNIQKE
STLHLVLRLRSGQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctcactggcaagaccatcacccttgaggtcgagcccagc
gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcatccccccagatcag
cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaggaatccaccctccatcttgtgctgcgtctgaggggaggcatgcagatcttt
gtgaagaccctcactggcaagaccatcacgctggaggtcgagcccagcgacaccatcgag
aacgtgaaggccaagatccaggataaggaaggcatccccccagatcagcagaggctgatc
tttgccggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaggaa
tccaccctccatcttgtgctgcgtctgaggggaggcatgcagatctttgtgaagaccctc
actggcaagaccatcacgctggaggtcgagcccagcgacaccatcgagaacgtgaaggcc
aagatccaggataaggaaggcatccccccagatcagcagaggctgatctttgccggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaggaatccaccctccat
cttgtgctgcgtctgaggggaggcatgcagatcttcgtgaagaccctcactggcaagacc
atcacgctggaggtcgagcccagcgacaccatcgagaacgtgaaggccaagatccaggat
aaggaaggcatccccccagatcagcagaggctgatctttgccggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaggaatccaccctccatcttgtgctgcgt
ctgaggggaggcatgcagatctttgtgaagaccctcactggcaagaccatcacgctggag
gtcgagcccagcgacaccatcgagaacgtgaaggccaagatccaggataaggaaggcatc
cccccagatcagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctc
tccgactacaacatccagaaggagtccaccctccatcttgtgctgcgcctgaggggaggg
cagtaaaaaaacatgcagatctttgtgaaaaccctcactggcaagaccatcacccttgag
gtcgagcccagcgacaccatcgagaacgtgaaggccaagatccaggataaggaaggtatc
cccccagatcagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctc
tccgactacaacatccagaaggagtccaccctccatcttgtgctgcgcctgaggggaggc
atgcagatctttgtgaagaccctcactggcaagaccatcacgctggaggtcgagcccagc
gacaccatcgagaacgtgaaggccaagatccaggataaggaaggcatccccccagatcag
cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaggaatccaccctccatcttgtgctgcgtctgaggggaggcatgcagatcttc
gtgaagaccctcactggcaagaccatcacgctggaggtcgagcccagcgacaccatcgag
aacgtgaaggccaagatccaggataaggaaggtatccccccagatcagcagaggctgatc
tttgccggcaagcagctggaagatggccgcaccctctccgaatacaacatccagaaggag
tccaccctccatcttgtgctgcgtctgaggagtggtcaataa
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