Gasterosteus aculeatus (three-spined stickleback): 120824756
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Entry
120824756 CDS
T07457
Name
(RefSeq) transportin-2 isoform X1
KO
K18727
transportin-2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120824756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120824756
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120824756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
IBN_N
TOR1L1_N
HEAT_EF3_N
Vac14_Fab1_bd
TPR_IPO5
Cnd1
TPR_DNAAF5
HEAT_MROH2B_C
PDS5
Adaptin_N
MMS19_C
Ltn1_1st
Dopey_N
INTS7_N
UNC45-central
HEAT_MROH2B_1st
TPR_TTI1_C
TPR_IPO11
Caerin_1
Motif
Other DBs
NCBI-GeneID:
120824756
NCBI-ProteinID:
XP_040041713
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All DBs
Position
IX:7139024..7147869
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AA seq
899 aa
AA seq
DB search
MEWQPDEQGLQQVLQLLKDSQSPDTATQRAVQEKLEQLNQFPDFNNYLIFVLTSLKSEDE
PTRSLSGLILKNNVKAHYQNFPPNVADFIKRECLNNIGDPSPLIRATIGILITTIASKGE
LQTWPELLPQLCNLLNSDDYNTCEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIIGRAQALMDNIDTFIESLFALAGDEDSEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDPDENVALEACEFWLTLAEQPICKEALSGHLVQLIP
ILVNGMKYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLQHEGGEDEEGEDIDE
DEDDDDDTLSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPDWVIKESGILVL
GAIAEGCMQGMVPYLPELIPHLIQCLCDKKALVRSIACWTLSRYAHWVVSQPPDAHLKPL
MTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIEKLMPPLIAKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKTLAQAMVSHTDMDSTEMYSQQPDQYEAPDKDFMIVALDLLSGL
AEGLGGHVDTLVARSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFPHVKPCIAEFMP
ILGTNLNPEFISVCNNATWAIGEICMQMGVEMQPYIAMVLNQLVEIINRPNTPKTLLENT
AISIGRLGYVCPQEVAPLLPQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGGVVQD
FIFFCDAVASWVNPKDDLRDMFCKILHGFKEQVGEENWQQFSEQFPPLLKERLAACYGV
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcagccggatgaacaaggtcttcagcaagtgctccagctactcaaggactct
cagtccccagacacggcaacacagagggctgtgcaagaaaaactggagcagcttaatcag
tttccagatttcaacaattatctcatctttgtcctcacaagcctaaaatctgaggatgag
cccactcgctctctcagtggtctgatactgaagaacaatgttaaggcccactaccagaac
ttcccgcccaacgtggctgacttcatcaaacgagaatgcctcaacaacatcggagacccg
tcgccacttatcagggctacgatcggcatcctgatcacaaccatagcctctaaaggagag
ctgcagacctggccagaattgttgcctcagctctgcaatctgctcaactccgacgactat
aacacctgcgagggttcttttggagcgttgcagaagatctgcgaggattcatcagagttg
ttggatagcgatgctctgaacagacccctcaacatcatgattcccaaattcctacagttt
ttcaagcactgcagccccaagattaggtcccacgccatagcatgtgtgaatcagttcatc
attggtcgagctcaggctctgatggacaacatcgacaccttcattgagagtctgtttgca
ttggccggtgatgaggacagcgaagtgcggaagaacgtttgcagggctctggtcatgctg
ctggaagttcgcattgatcgcctcatcccacacatgcacagcatcatccagtacatgctg
cagcggacccaggacccagatgagaacgtggctctggaggcctgtgagttctggctgacg
ctcgctgaacagcccatctgcaaagaggccctgtccggccacttggttcaactgatcccc
atcctagtgaatgggatgaaatactctgagattgatattattcttctaaagggcgacgtc
gaagaggacgaggcggttcccgacagcgagcaagacatcaagcctcgcttccacaagtcc
cgcaccgtcactctgcagcacgaaggaggggaggacgaggagggagaggacattgatgaa
gacgaggacgatgacgacgacacgctgtccgactggaacttgcggaagtgttcggctgcg
gctctggacgtcctcgccaacgtgtttcgtgaggagttgctcccccatctgctgcccctg
ctcaaaggtctgctcttccaccctgactgggtcatcaaggagtccggcatccttgtgctg
ggagccatcgctgagggctgcatgcagggcatggtgccttacctgccagagctcatcccc
cacctcatccagtgtttgtgcgacaagaaggccctggtccgctccatcgcctgctggacc
ctcagccgctacgcccactgggtggtcagccagccccccgacgctcacctcaaacccctc
atgaccgagctgctcaaacgcatcctggatggcaataaaagggtacaagaagcagcgtgc
agcgcgtttgccactttggaggaggaggcgtgcacagagctggtgccttacctgagcttc
atcttagacacgctggtttttgcttttggcaaataccagcacaagaacctgctcatcctg
tatgacgccataggaacactggcggactcagtgggacatcatctcaaccagccagagtac
atagagaagctgatgcctccactcatagccaagtggaacgagctgaaggacgaagacaaa
gatctcttccctctgctcgagtgtctgtcgtctgttgccacggcgctgcagagtggcttc
ctcccctactgcgagcccgtctatcagcgctgtgtcaccctggtccagaagacactggct
caggccatggtgagccacactgacatggactcaacagagatgtacagtcagcagccagac
cagtacgaagcacccgacaaggacttcatgattgtggctctggatcttttaagcggctta
gctgagggactggggggccacgtggacacgctggtagcccgcagtaacatcatgacgctg
cttttccagtgcatgcaggatacgatgcctgaagtaaggcagagttcatttgccctcctt
ggtgacttgaccaaggcttgcttccctcatgtcaagccgtgtattgctgaatttatgccg
attctcgggacaaatctgaaccctgagtttatctctgtctgcaacaatgctacctgggcc
ataggagagatctgtatgcagatgggagtggaaatgcagccatacatcgctatggttctg
aaccagttggttgagattatcaatcgacccaacacgcccaagaccctgctggagaacacc
gcaatcagcatcgggcgactgggctacgtgtgtcctcaagaggtcgcacccttactgccg
cagtttatccgaccctggtgtacgtctctgcggaacatcagagacaacgaggagaaagac
tccgctttccgcgggatttgcatgatgatcggcgtgaacccaggaggcgtggtgcaggac
ttcatcttcttctgtgatgctgtagcctcctgggtgaatcctaaggacgacctgagagac
atgttctgcaagatcctgcatggttttaaggagcaggttggggaggagaactggcagcag
ttctcagagcagtttccgccactgctgaaggagagactggcagcctgctacggcgtttag
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