Gasterosteus aculeatus (three-spined stickleback): 120825979
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Entry
120825979 CDS
T07457
Name
(RefSeq) antigen peptide transporter 2-like isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat02010
ABC transporters
gat04145
Phagosome
gat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120825979
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120825979
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120825979
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gat02000
]
120825979
Enzymes [BR:
gat01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
120825979
Transporters [BR:
gat02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
120825979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
ABC_ATPase
AAA_15
RsgA_GTPase
AAA_30
AAA_29
Motif
Other DBs
NCBI-GeneID:
120825979
NCBI-ProteinID:
XP_040043809
LinkDB
All DBs
Position
X:1012804..1017841
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AA seq
720 aa
AA seq
DB search
MTTADMAKVTRKGIALVSAVCVDLSLFYAAGLVATRSVFGHFARLWLHAALRCSALSAVT
LLTLGDLNPLLIRVIASHSLLPAVFETGTKALYREETECGPSADARCWLVCAAASLVGAL
FWEISVPDAEDAAAGKEKKQKARVLFLRVLALYKPEYLLLLGGLLMLTLAVLCEMFIPFY
TGRVIDILGTQYRPNEFVSALLFMGLYSLGSSFSAGCRGGFLMCAISAFTCRIKVQLFGA
LTRQEIGFFETTKTGEITSRLSKDTTLMGRAVCLNVNVLLRTFIKTLGMISLMMNLSWKL
TFLVLMGVPITSLIQNIYDTHYQRLSLAVHDSMALANEVVNEVVSSIHVVRSFNTEKHEA
RRYDDRLMDTHILKTRQNAVSAVYLLARRLTGLGMQVVMMYYGRLFIRSGQMTTGNLVSF
ILYQSDLGDNIRTLTYIFGDMLNSVGAAGKVFEYLDRKAQVSMEGKLKPDQLTGNVVFRN
LSFAYPTYPDKTVLQDFSLELKSGQMTALVGTSGKGKSTCVSLLQRFYEQQDGEILLDNE
PLKSYDHRFLHKKIALVSQEPVLFSGSIRDNIAYGLAECSLDEIQEAARKANAHDFIMKL
EKGYDAEVGEGGGQLSKSQRQQIAIARALVRQPQVLILDEITSSLDMTSENKIHQALASC
PNQTLLVIAHKLRTIQRADQIVVIDGGRVQERGTHQELMELKGSYYRLREELFEEENPAQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagccgatatggcaaaagtaacccgcaaaggcatcgctttggtgtccgcagtc
tgcgtggacctgtccttgttttacgcagcgggactggtggcgactcgcagcgtgtttgga
cactttgcgcgtctctggctccacgcggctctccgctgctcggcactgagcgccgtgact
ctgctcaccctcggagatctcaacccgttgctgatccgcgttatcgcgtcgcacagtctg
ctgcccgcggtgtttgagaccggaaccaaagcgctctaccgcgaggagaccgaatgcggc
ccgtcggcggatgcgcgctgctggctcgtttgcgccgcagcgtcgctggtcggtgcgctg
ttttgggaaatcagcgtgccggacgcggaagatgctgccgccggtaaagagaagaaacag
aaggccagagtgctgtttttgagagtcctggccttgtacaaacccgaatatctgctgctc
cttggggggctgctgatgctgacgctggcagttttgtgtgagatgttcatcccgttctac
actggcagagtcatcgacatccttggcactcagtatcggcccaatgaatttgtatctgcg
cttcttttcatgggactatactctctgggcagctcttttagtgcaggctgcagaggaggt
ttcttaatgtgcgccatcagcgccttcacgtgcagaattaaagtccagctgtttggggct
ttgaccagacaggagattgggttctttgagacaacaaagacaggggaaatcacatcaagg
ttgtctaaagacaccaccctgatgggaagagcggtgtgtctcaatgtcaacgtgctgctg
aggacgttcatcaagacgctgggcatgatctccctgatgatgaatctttcctggaagctc
acattcctggtattgatgggggtgcccatcaccagcctcattcagaacatctatgacaca
cactaccagcggctgtccctggcagtgcacgactccatggctctggcaaatgaagtcgtg
aacgaggtggtgtccagtattcatgtggtacgtagcttcaacacagagaaacacgaagcc
cgtcgttatgacgaccgcttgatggacacacacatcctgaagacgcgccagaacgctgtc
agcgctgtttaccttctcgcgcgcaggttgacaggcttaggcatgcaggtggtcatgatg
tactacggcaggctgttcatccggagtggacagatgaccactggaaacctggtttccttc
atcctctaccagtcagatcttggagacaacatcaggacactgacctacatctttggcgac
atgctgaactcggtgggggctgctgggaaagtgtttgagtacctggaccgtaaagctcag
gtcagcatggaggggaaactcaaaccggatcagctgacagggaacgtcgtcttccgcaat
ctcagcttcgcctatcccacttaccccgacaaaacagtactgcaggacttttcattggag
ctgaagtcaggtcagatgacagcgctggtgggaacatctggaaaagggaaaagcacatgt
gtgagtctgctgcagcgcttctatgagcagcaggacggagaaatcctattggacaacgaa
ccactgaaatcctatgaccaccgtttcctccacaagaagattgctttggtgagccaggag
cctgtcctcttctctggctccatcagagacaacatcgcctacgggctcgctgaatgctca
ttggatgagatccaggaagcagcacgcaaagccaacgcacacgacttcatcatgaagctg
gagaagggctacgatgcagaggtgggtgaggggggggggcaactatctaagagccagagg
cagcagatcgccatcgctcgagctctggtcaggcagccacaggtcctcattctggatgaa
ataaccagctctctggacatgaccagtgaaaacaagattcaccaggctttggccagttgt
cctaaccagaccctgctggtgatcgcccacaagctgaggaccatccagagggccgatcag
attgttgtgatcgatggcggcagagttcaggagcgagggactcaccaggaactgatggag
ttgaaggggagctactaccgactgagggaggagctctttgaagaggaaaatccagcacag
tga
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