Gasterosteus aculeatus (three-spined stickleback): 120828004
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Entry
120828004 CDS
T07457
Symbol
rarab
Name
(RefSeq) retinoic acid receptor alpha-B
KO
K08527
retinoic acid receptor alpha
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120828004 (rarab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gat03310
]
120828004 (rarab)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120828004 (rarab)
Nuclear receptors [BR:
gat03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
120828004 (rarab)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120828004
NCBI-ProteinID:
XP_040047208
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Position
XI:2483468..2495980
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AA seq
482 aa
AA seq
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MYESVDVVAFSPNPSSPSPGSFLSMDYYHRPPGLGPEKGLLSGAGGLQRPFGGSLVSGRH
WSGSSHSIETESTSSGEDLLVPSPASPPPPPRIYKPCFVCQDKSSGYHYGVSACEGCKGF
FRRSIQKNMVYTCHRDKVCVINKVTRNRCQSCRLQKCLEVGMSKELVRNDRMKKKKEDKR
QGETEIYVLSADTEQMIEGVRRAHQATFPSLGQLGKYTTSDSSEHRVALDVSLWDKFSEL
STKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPDKDTMTFSDGLT
LNRTQMHNAGFGPLTDLVFSFANQLLPLEMDDAETGLLSAICLLCGDRQDLEESDKVDVL
QEPMLEALKIYVRRRRPEKPCMFPKILMKITDLRSISVKGAERVITLKMEIPGSMPPLIQ
EMLENSEGLEGHGAGGGKGAGGGKGCAGGTEEDESELGSRRQSPSPESASSHCRSPASSP
SP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaagcgtggatgttgtggcttttagccccaacccgagcagccccagtcccggc
tccttcctgagcatggactactaccaccgccccccggggctcgggccggagaaggggctg
ctgtccggcgcgggggggctccagcgcccgttcggagggtccctggtgagcggccggcac
tggagtggatccagccactccatagagacggagagcacgagttcgggagaggacctgctc
gtccccagcccggcctcccccccgcctccgccccgcatctacaagccctgcttcgtctgc
caggacaagtcctcagggtaccactatggagtcagcgcctgcgagggctgcaagggtttc
tttcggagaagcatccaaaagaacatggtgtacacgtgtcaccgagacaaagtgtgtgtg
ataaacaaggtgacgaggaaccggtgccagtcctgccggctgcagaaatgcctcgaggtc
ggcatgtccaaagagctggtgcgaaacgaccgcatgaagaagaagaaggaggacaagagg
cagggggagacggagatctacgtcctgtcggcagacaccgagcagatgatcgaaggggtc
cgccgggcccaccaggcaacctttccctccctcggtcagctgggaaaatacaccacgagc
gacagctcggagcaccgcgtggctctggacgtcagtctctgggacaagttcagcgagttg
tccaccaagtgcatcatcaagacggtggagttcgccaagcagctgcccggcttcaccacg
ctgaccatcgccgaccagatcaccctgctcaaagccgcctgcctggacatactgattctg
aggatctgcacccgctacacgccagacaaggacaccatgaccttctccgacggtctgacc
ctcaaccgcacacagatgcacaacgccggcttcgggccgctcacggacctggtgttctcc
ttcgccaaccagctgctgccgctggagatggacgacgcggagacagggctgctcagcgcc
atctgcctgctctgcggagaccgtcaggatctggaggagtcggacaaggtggatgttctc
caggagccgatgcttgaagccttgaagatctacgtgaggaggaggaggcccgaaaaacct
tgcatgtttcccaagatactgatgaagattactgacctcaggagcatcagtgtgaaggga
gcagagcgagtgatcacgctgaagatggaaatacccggctcaatgccgcctctcatccag
gaaatgctggagaactctgaggggctggaggggcatggagccgggggagggaaaggagca
ggaggagggaaaggttgcgccggaggcacagaagaggacgaatcagagctcggaagccgc
cgtcagagtccgtcgccggagtctgcttcctcgcattgccggagccccgcctcctccccc
tccccctga
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