Gasterosteus aculeatus (three-spined stickleback): 120828874
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Entry
120828874 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-responsive transactivator-like
KO
K15623
protein SSXT
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120828874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120828874
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120828874
GBAF(ncBAF) complex
120828874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
120828874
NCBI-ProteinID:
XP_040048469
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Position
XII:2946250..2952043
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AA seq
352 aa
AA seq
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MSVAFPPARARAKGHVTQHAIQTMLDENNHLIQCIMDYQSKGKSDECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTPNMSMGPGGMGQSGGHAPNHLNDAMAPGLPPASVMQSQMS
NGSSHAPMQQHAAQVQAAVPPASLSLRAGGYGRAAPPSQGNGPGCGPSSSSTRGNLSVQS
SQASMTHQQSAAPHYSSAQVGGQYYQGQPAMMGAGAQGNGVMPQRPLGSYRSAQPGHGEY
SYQQSSYGEQGYDGSFGDSPQHYYEGGNPQCSQQQAQYQQGSGQQQYSSQQGYGGTPHGG
YGAGQAGSSQYPQYQRGQSGQYGSYRPSQGGSGAPTQRPRAYETGQYGNYQQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcgttcccaccggcgcgggccagggccaaagggcacgtgacgcagcacgcg
atccaaacgatgctggatgaaaataatcatctaatacaatgtattatggattaccaaagc
aaaggaaagagcgatgaatgcacacagtatcagcagatcctgcacagaaatctagtgtac
ttggccacaatagccgattcgaatcagaacatgcagtcactactacctgcacctcccact
cccaacatgtctatgggtcccggagggatgggccagagcgggggacacgctccaaaccac
ctcaatgacgccatggcaccaggactgccccccgcatcagtgatgcagagccaaatgagc
aacggctctagccacgcccccatgcagcagcacgccgcccaggtgcaggcggctgttccc
cccgcgtccctcagcctgcgagcgggcggctacggccgcgctgcgcctccctctcagggc
aacgggcctggttgtggcccttcctcttcctccacccgcggaaacctcagcgtgcaatcc
agccaagcctccatgacgcatcagcagtctgctgcgccgcactactcctcggcccaggtc
gggggtcaatactatcagggacagccggccatgatgggtgcgggcgctcagggaaacggc
gtgatgccccagaggcccctgggatcctaccgctccgcacagccgggtcacggggagtac
tcgtatcagcagtcctcatatggcgagcaaggctacgacggatccttcggcgactcccca
cagcattactacgaaggaggcaaccctcagtgcagtcagcagcaggcccagtaccagcag
ggatccggccagcagcagtattcctctcaacaaggctacggcggaacgccacacggagga
tacggtgcaggccaggctggatcctctcagtatcctcagtaccagcggggtcagagcggt
cagtacggatcctaccgcccctctcagggaggctccggggcgccgacgcagaggccgcgc
gcgtatgaaacgggtcagtatgggaactatcagcaataa
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