Gemmatirosa kalamazoonensis: J421_2739
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Entry
J421_2739 CDS
T03025
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J421_2739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gba03400
]
J421_2739
Enzymes [BR:
gba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J421_2739
DNA repair and recombination proteins [BR:
gba03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J421_2739
Prokaryotic type
J421_2739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHG90276
UniProt:
W0RHN5
LinkDB
All DBs
Position
3194582..3195226
Genome browser
AA seq
214 aa
AA seq
DB search
MSRRLPISAALESHRAALAACRRCTLPPDVRPVVSHAREPRIVLVGQAPGRAEVSNGRAF
SGRAGKTLFRWFERAGFTEDVVREHVYIAAVTRCFPGAHPSGRGDRVPNPSERTACAGWL
DAELRIIRPELIIPVGRLAMDRFFGPRPLDALVGREHEVAYDGGRAVAVPLPHPSGASSW
VHAAEHQALLQRALELLAVRFAALGIGEGVRSAA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgccgtctcccgatctccgccgcgctcgagtcgcaccgcgccgcgctcgcggcc
tgccgccgctgcacgctcccgcccgacgtccgccccgtcgtctcccacgcccgcgaaccg
cgcatcgtgctcgtcggccaggcgcccggccgggccgaggtctcgaacggacgcgcgttc
tcggggcgcgcggggaagacgctgttccggtggttcgagcgcgccgggttcaccgaggac
gttgtgcgcgagcacgtctacatcgcggccgtcacgcggtgctttcccggcgcccatccc
tccggccgcggcgaccgcgtgccgaacccgtcggagcggaccgcgtgcgcggggtggctc
gacgcggagctgcggatcatccggccggagctgatcatccccgtcggccggctggcgatg
gaccgcttcttcgggccgcgcccgctcgacgcgctcgtcgggcgcgagcacgaggttgcg
tatgacggggggcgcgccgtcgccgtgcccctgccgcatccctccggcgcgagctcctgg
gtgcacgcggcggagcaccaggcgctgctgcagcgcgcgctcgagctgctcgccgtgcgc
ttcgccgcgctcggcatcggcgagggcgtgcggagcgccgcgtga
DBGET
integrated database retrieval system
