Gemmatirosa kalamazoonensis: J421_5865
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Entry
J421_5865 CDS
T03025
Name
(GenBank) beta-lactamase
KO
K21469
serine-type D-Ala-D-Ala carboxypeptidase [EC:
3.4.16.4
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00550
Peptidoglycan biosynthesis
gba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J421_5865
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gba01002
]
J421_5865
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gba01011
]
J421_5865
Enzymes [BR:
gba01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
J421_5865
Peptidases and inhibitors [BR:
gba01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
J421_5865
Peptidoglycan biosynthesis and degradation proteins [BR:
gba01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
J421_5865
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AHG93400
UniProt:
W0RSV9
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All DBs
Position
p2:370561..371772
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AA seq
403 aa
AA seq
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MLPSFAIAAAVLLATSLLPTRAGDELLPHAAPADVGMSADRLAVIDRVVQRAIDAGGFPG
AAVVVGRHGAIVWERGYGALGGGSSAAVDPERTLFDLASLTKVVATSAAAMVLVDEGRLG
LDDPVGRYLPEFRAGAKGRVTIRHLLRHRSGLPAGRTLASSAAESRRLVLGTALEAAPGE
RYEYSDLGPIVLGFVIERITGEPLDRFVQHAVYARLGMQSTTFRPARALAPRIAATEPGV
PRGEVHDRASHALGGVAGHAGLFGTAGDLAIFAQFMLDRGSRHGVRLVRDSTVAAFTRRG
AEDRQALGWETCAGGGSCGQRLSRTAFGHTGFTGTSLWVDPERDLFVIVLTNWIAGRPGG
GVAPVAVLHDVRADVADLAALAVVDGAPAPMPDRMRSDARIGW
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgctcccgtcgttcgccatcgccgccgccgtcctcctggcgacctccctgctcccgacc
cgcgcgggagacgagctgctcccgcacgccgcgcccgccgacgtcgggatgtcggcggac
cggctcgcggtgatcgatcgcgtcgtgcagcgcgcgatcgacgccggcggatttccgggc
gccgcggtcgtcgtcggccgccacggcgccatcgtgtgggagcgcggctacggcgcgctc
ggcggcggctcgagcgcggcggtcgacccggagcgcacgctgttcgatctcgcgtcgctc
acgaaggtcgtcgcgacgagcgccgcggcgatggtgctcgtcgacgagggacggctcggg
ctcgacgacccggtcggccgctacctgccggagtttcgcgccggcgcgaagggccgcgtg
acgatccgccacctgcttcgccatcgctccgggctgcccgccggccgcacgctcgcgtcg
agcgccgccgagtcgcggcggctcgtgttaggcaccgcgctggaggccgcgccgggcgag
cgctacgagtactccgacctcggcccgatcgtgctcggcttcgtcatcgagcgcatcacc
ggcgagccgctcgatcggttcgtgcagcacgccgtctacgcgcggctcggcatgcagtcc
acgacgttccgaccggcgcgcgcgctcgcgccgcgcatcgccgcgaccgagcccggcgtc
ccgcgcggcgaggtgcacgaccgcgcgtcgcacgcgctcggcggcgtcgccggccacgcg
gggctgttcggcaccgcgggcgacctcgcgatcttcgcgcagttcatgctcgaccgcggc
agccgacacggcgtccgcctcgtgcgcgacagcaccgtcgcggcgttcacgcggcgcggc
gccgaggatcggcaggcgctcggttgggagacgtgcgccggcggcgggagctgcggccag
cgcctgtcacggaccgcgttcgggcacaccggcttcaccggcacgtcgctgtgggtcgac
ccggagcgcgacctgttcgtgatcgtgctgacgaactggatcgcgggccggcccggtggc
ggtgtcgcgccggtggcggtgctgcacgacgtgcgcgccgacgtcgccgatctcgccgcg
ctggccgtcgtcgacggcgcgcccgcgccgatgcccgatcggatgcggagcgacgcgcgc
atcggttggtga
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