Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_0988
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Entry
GbCGDNIH2_0988 CDS
T03083
Name
(GenBank) DNA-directed RNA polymerase omega chain
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Pathway
gbh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GbCGDNIH2_0988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gbh03021
]
GbCGDNIH2_0988
03400 DNA repair and recombination proteins [BR:
gbh03400
]
GbCGDNIH2_0988
Enzymes [BR:
gbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GbCGDNIH2_0988
Transcription machinery [BR:
gbh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GbCGDNIH2_0988
DNA repair and recombination proteins [BR:
gbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GbCGDNIH2_0988
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AHJ69225
UniProt:
A0AAN0RDG8
LinkDB
All DBs
Position
1169182..1169592
Genome browser
AA seq
136 aa
AA seq
DB search
MGGRRMARVTVEDCVEKVPNRFELVLLAAHRARCISRGEELTIDRDNDKNPVVALREIAD
ETVTTTGLHQDLMKSLSRAPEPEPADEEVLDLIPTEQNIFGLQDVSAEEEAHSSAADLSS
DEMEAAIEAELGGRRR
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
ttgggaggtcgccgcatggcgcgcgtcaccgttgaagattgcgtcgaaaaggtgcccaac
cggttcgaactggttctgctggccgcccatcgtgcccgctgcatcagccgtggcgaggaa
ctgaccattgatcgtgacaacgataagaacccggtggtcgcactccgtgaaattgctgat
gagacggtgaccaccactggattgcatcaggatctgatgaagtcactttcccgcgcgccg
gagccggaacccgcggatgaagaagtcctcgatctgatcccgaccgagcagaatatcttt
ggcctgcaggatgtttctgccgaggaagaagctcattccagtgcggccgatctctcatcc
gatgagatggaagctgcgattgaggccgaacttggcggtcgtcgtcgctga
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