Citrifermentans bemidjiense: Gbem_3432
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Entry
Gbem_3432 CDS
T00749
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm02024
Quorum sensing
gbm03060
Protein export
gbm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Gbem_3432 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Gbem_3432 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Gbem_3432 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gbm02044
]
Gbem_3432 (ffh)
Enzymes [BR:
gbm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Gbem_3432 (ffh)
Secretion system [BR:
gbm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Gbem_3432 (ffh)
Eukaryotic Sec-SRP protein
Gbem_3432 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
ATP_bind_1
AAA_24
AAA_30
AAA_16
AAA_31
AAA_15
AAA_17
HrpJ
TctA
RepL
AAA_18
Thymidylate_kin
6PF2K
AAA_33
ParBc
Motif
Other DBs
NCBI-ProteinID:
ACH40425
UniProt:
B5EBD3
LinkDB
All DBs
Position
complement(3943623..3944984)
Genome browser
AA seq
453 aa
AA seq
DB search
MFATLSDKLDLVFKKLRGQGVMTEENVKDALREVRLALLEADVNFKVVKEFVEKVRGRAV
GTEVLQSLAPGQQVIKIVHDELVLLMGGEEDNSLDLAAKPPVAIMLVGLQGAGKTTSCGK
LAKFLKAQRKKPLLVPADVYRPAAIEQLKVLGRQLDIEVFGSEATQKPLEICRAAHRYAT
LNGFDVVIFDTAGRHQIDDYLMNELEGIRDELAPREILFVADAMTGQEAVNVASGFNDRL
GITGVILTKLDGDAKGGAALSIKAVTGKPVKFVGLGEKLDALDVFHADRLVSRILGMGDV
LTLIEKAQATMDEKEAVRLQDKMKKSGQFDLEDFRNQLQQIKKMGSLESIMNMIPGMGKA
MKQMQGAQPSEKELKRIEAIIDSMTAKERANHTIINGSRRLRIAKGSGTSVQEVNQLLKR
FSEAQKVVKQLQKMGPKGLLKGMKGMGKGMLPF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccacactttccgacaaacttgacctggttttcaagaagctccgcggccagggg
gtcatgaccgaagaaaacgtcaaggacgccctgcgtgaagtgcgtctggcgcttcttgag
gcggacgtcaatttcaaggtcgtcaaggaattcgtcgagaaggtccgcggccgcgctgtc
ggtaccgaggtgctgcaaagccttgccccggggcagcaggtaatcaagatcgtccacgac
gagctggtgcttctgatgggcggcgaggaggacaactccctcgacctcgcggccaagccg
ccggtagcgatcatgctggtcggcctgcagggcgccggtaagaccacgtcttgcggcaag
ctcgccaagttcctgaaggcgcaaaggaaaaagccgctgctggttccggccgacgtctac
cgtccggccgctatcgagcagttgaaggtgctggggcgtcagctcgatatcgaggtgttc
ggctccgaagcgacccagaagccgctggagatctgccgcgccgcgcaccgctacgcgacc
ctgaacggctttgacgtcgtcatcttcgataccgccggccgccaccagatagacgactac
ctgatgaatgagctggaaggtattcgcgacgagttggctccgcgcgagatcctgttcgtg
gccgacgccatgacggggcaggaagcggtcaacgttgccagcggcttcaacgaccgcctc
ggcatcaccggggtgatcctgaccaagctcgacggcgacgccaaggggggcgcagcgctc
tccatcaaggccgttaccggcaagccggtcaagttcgtaggcctgggcgagaagctcgac
gcgctcgacgtgttccacgccgaccgcctggtttcccgcattctcggcatgggtgacgtg
cttaccctgatcgagaaggcgcaggcgaccatggacgagaaggaagcggtccgcctgcag
gacaagatgaagaaatccggccagttcgacctggaggatttcagaaaccagctgcagcag
atcaagaagatgggttcgctcgaatccatcatgaacatgatccccggcatggggaaggcg
atgaagcagatgcagggggctcagccttcggagaaggagctgaagcggatcgaggcgatc
atcgactccatgaccgcgaaggagcgcgccaaccacaccatcatcaacggcagccgccgt
ttgaggatagccaaagggagcggcaccagcgttcaggaagtgaaccagttgctcaaacga
ttctctgaggcgcagaaggtagtgaagcagttgcagaagatgggccccaaagggctctta
aagggaatgaaggggatgggaaaagggatgctccccttttaa
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