Citrifermentans bremense: GEOBRER4_25320
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Entry
GEOBRER4_25320 CDS
T07006
Symbol
kdsC
Name
(GenBank) haloacid dehalogenase
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn00540
Lipopolysaccharide biosynthesis
gbn01100
Metabolic pathways
gbn01250
Biosynthesis of nucleotide sugars
Module
gbn_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GEOBRER4_25320 (kdsC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gbn01005
]
GEOBRER4_25320 (kdsC)
Enzymes [BR:
gbn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
GEOBRER4_25320 (kdsC)
Lipopolysaccharide biosynthesis proteins [BR:
gbn01005
]
Lipid A
GEOBRER4_25320 (kdsC)
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Motif
Pfam:
Hydrolase_3
Hydrolase
HAD_2
Motif
Other DBs
NCBI-ProteinID:
BCG47782
UniProt:
A0A6S6M0A2
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Position
complement(2919923..2920438)
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AA seq
171 aa
AA seq
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MEERLKKIKLLILDVDGVMTDGRIIFDSNGVESKFFNVKDGHGIKMLQRSGIEVGIISGR
ESQVVYNRAVELGIGQVYQKSLDKLVPYRQMLEATGLTDEEVAFMGDDVIDIPLLKRVGF
AAAPADAVEEVFEFAQFVAKNKGGWGAVRELCDLILKAQGNWETVTSRYYA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagactgaaaaagataaagctcctgatcctggacgtggacggcgtgatgacc
gacgggcgcatcatcttcgattccaacggggtcgagagcaagttcttcaacgtgaaggac
ggccacggcatcaagatgctgcagcgctccggcatcgaggtaggtatcatctccggtcgc
gaatcccaggtggtctacaaccgcgccgtcgaactcggcatcggccaggtttaccagaag
tcgctcgacaagttggttccctaccgccagatgctggaggcgacgggcctcaccgacgaa
gaggtcgccttcatgggggacgacgtgatcgacatcccgctcttgaaaagggttgggttt
gccgcagcccccgcggatgccgtggaggaggtcttcgaattcgcccagttcgtggccaag
aacaagggcggctggggcgccgtgcgcgagctctgcgatctcatcctgaaggcccaggga
aactgggaaacggtcacctcaaggtactacgcgtag
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