Citrifermentans bremense: GEOBRER4_32860
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Entry
GEOBRER4_32860 CDS
T07006
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GEOBRER4_32860 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gbn02000
]
GEOBRER4_32860 (msbA)
Enzymes [BR:
gbn01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
GEOBRER4_32860 (msbA)
Transporters [BR:
gbn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GEOBRER4_32860 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA
ABC_ATPase
AAA_30
AAA_5
Zeta_toxin
ATP-synt_ab
AAA_25
AAA_29
TMEM175
AAA_28
AAA_14
SRP54
TsaE
NB-ARC
DUF7625
Motif
Other DBs
NCBI-ProteinID:
BCG48536
UniProt:
A0A6S6M9J0
LinkDB
All DBs
Position
complement(3777623..3779368)
Genome browser
AA seq
581 aa
AA seq
DB search
MSAVNEKATNAFKRLLQYSRPYWWRIALAAVGSLGVGAMDGALAYLVEPVLRKIFSGKET
GIFVLLPIGIIVLYALRGCCRYTNDFFIRSAGQLAVQDVRNDLYERNMRLSLGYFFRNET
GTLMSRVLSDVAMMQEGVASVITGLFRDGISSVSLLCVIFYRDWKLALISFVVIPLTVIP
AQKIGKRIKGLARHGQEKMGDLASILQETYSGIKVVKAFGLEAREVERFKRSNEEFYYFT
RKNIKYEGLSAPIMEFIISFGVAAVIWVGGSSVMQGTRSASEFFSFITAMVLVFTPIKRL
ISSYNNVQRSVGAAERVFEVMDEEPEIVDLPGSSDLGRAKGEVEFRDVHFKYEDEYVLQG
VSLVARRGEVIALVGPSGGGKTTLVSLITRFYDPTQGAVLMDGVDIRQRTVKSLLEQIAL
VDQETILFNDTIANNIRYGKINATDAEVEAAARAAFAHDFILELPEGYETNIGDRGVRLS
GGQRQRLCIARAILKDAPILILDEATSALDTESEQMVQQALNNLMHNRTTFVIAHRLSTI
THADRIVVLEKGKIAEVGSHQTLMDNEGLYSRLHGMQFKTS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtaaacgagaaagcaaccaatgccttcaaaaggctgctgcaatacagtcgc
ccctactggtggcgcatcgccctggcggcggtgggctcccttggcgtcggcgcgatggac
ggcgccctggcctacctggtggagccggtgttgagaaagatcttctccggcaaggagacc
ggcatcttcgtcctccttcccatcgggataatcgtgctctacgcgctgcgcggctgctgc
cgctacaccaacgacttcttcatcaggagcgccggccagctcgccgtgcaggacgtcagg
aacgatctctacgagaggaacatgaggctcagccttgggtacttcttccgtaacgaaacc
gggaccctcatgtcgcgggtcctaagcgacgtcgccatgatgcaggagggggtggcgagc
gtcatcaccggcctgttccgcgacggcatctcgtccgtttcgcttttgtgcgtcatcttc
taccgcgactggaagcttgcacttatctccttcgtcgtcatcccgctcaccgtgatccct
gcccagaagatcggcaagaggatcaaggggctcgcccggcacgggcaggagaagatgggg
gatctggcgagcatcctccaggagacctattccggcatcaaggtggtgaaggcgttcggg
ctcgaggcgcgcgaggtggagcgtttcaagcgcagcaacgaggagttctactacttcacc
aggaagaacatcaagtacgaggggctctccgctcccatcatggagttcatcatctccttc
ggcgtggcggccgtaatctgggtgggcggcagcagcgtcatgcaggggacccgcagcgcc
tcggagttcttctccttcatcaccgctatggtgctggtgttcacccccatcaagcgactg
atctcttcctacaacaacgtccagcgctcggtgggcgctgcggagcgggtgttcgaggtg
atggacgaggagcctgagatcgtggacctgccgggttccagcgacctggggagggccaag
ggggaggtggagttccgcgacgtccacttcaagtacgaagacgagtacgtgctgcagggg
gtgagcctcgtggccagaaggggagaagtgatcgccctggttgggccttccggcggcggc
aagaccacgctggtctcgctcatcaccaggttctacgacccgacacagggggcggtgctc
atggacggggtggatatccggcagcggaccgtaaagagcctcctggagcagatcgcgctg
gtggaccaggagaccatcctcttcaacgacaccatcgccaacaacatccgctacggcaag
ataaacgccaccgacgccgaggtcgaggccgcggcacgcgccgccttcgcccacgatttc
atcctggagctccccgaggggtacgagacaaacatcggcgaccgcggcgtccgtctctcc
ggaggtcagcggcagcggctctgcatcgcccgggcgatcctcaaggacgccccgatactg
atcctggacgaggccacgagtgcgctcgataccgagagcgagcagatggtgcagcaggcc
ttgaacaacctgatgcacaaccgcaccaccttcgtcatcgcgcaccgcctttccaccatc
acccacgccgaccggatcgtggtgcttgagaaggggaagattgccgaggtggggagccac
cagacgctcatggacaacgaagggctctacagccgtctgcacgggatgcagtttaagacg
tcgtag
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