KEGG   Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_1123
Entry
GbCGDNIH4_1123    CDS       T03156                                 
Name
(GenBank) sRNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
gbs  Granulibacter bethesdensis CGDNIH4
Pathway
gbs02024  Quorum sensing
gbs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gbs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GbCGDNIH4_1123
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GbCGDNIH4_1123
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gbs03019]
    GbCGDNIH4_1123
   03036 Chromosome and associated proteins [BR:gbs03036]
    GbCGDNIH4_1123
Messenger RNA biogenesis [BR:gbs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     GbCGDNIH4_1123
Chromosome and associated proteins [BR:gbs03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    GbCGDNIH4_1123
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: AHJ66479
LinkDB
Position
1247364..1247645
AA seq 93 aa
MASEKSQNVQDVFLNHVRKSKTPVTVFLVNGVKLQGIITWFDNFSVLLRRDGHTQLVYKH
AISTVMPGAPIQLFDATKPEGGIGHDTAAYSDE
NT seq 282 nt   +upstreamnt  +downstreamnt
atggccagtgaaaagtcccagaacgttcaagatgtctttctcaaccatgtgcgcaagagc
aagacaccggtgacggtatttctggtcaatggggtcaagcttcagggtattattacctgg
tttgacaatttctctgttctcttacgccgtgacgggcatacccagcttgtctataaacat
gcaatcagcaccgtgatgccgggtgcacccattcaattgttcgacgcgaccaagccggaa
ggcggtattggccatgatacggccgcctattccgacgagtag

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