Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_1123
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Entry
GbCGDNIH4_1123 CDS
T03156
Name
(GenBank) sRNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs02024
Quorum sensing
gbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GbCGDNIH4_1123
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GbCGDNIH4_1123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbs03019
]
GbCGDNIH4_1123
03036 Chromosome and associated proteins [BR:
gbs03036
]
GbCGDNIH4_1123
Messenger RNA biogenesis [BR:
gbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GbCGDNIH4_1123
Chromosome and associated proteins [BR:
gbs03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
GbCGDNIH4_1123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
AHJ66479
LinkDB
All DBs
Position
1247364..1247645
Genome browser
AA seq
93 aa
AA seq
DB search
MASEKSQNVQDVFLNHVRKSKTPVTVFLVNGVKLQGIITWFDNFSVLLRRDGHTQLVYKH
AISTVMPGAPIQLFDATKPEGGIGHDTAAYSDE
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaaaagtcccagaacgttcaagatgtctttctcaaccatgtgcgcaagagc
aagacaccggtgacggtatttctggtcaatggggtcaagcttcagggtattattacctgg
tttgacaatttctctgttctcttacgccgtgacgggcatacccagcttgtctataaacat
gcaatcagcaccgtgatgccgggtgcacccattcaattgttcgacgcgaccaagccggaa
ggcggtattggccatgatacggccgcctattccgacgagtag
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