Glutamicibacter creatinolyticus: GcLGCM259_2092
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Entry
GcLGCM259_2092 CDS
T05997
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
gcr
Glutamicibacter creatinolyticus
Pathway
gcr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gcr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GcLGCM259_2092 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcr03021
]
GcLGCM259_2092 (rpoB)
03400 DNA repair and recombination proteins [BR:
gcr03400
]
GcLGCM259_2092 (rpoB)
Enzymes [BR:
gcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GcLGCM259_2092 (rpoB)
Transcription machinery [BR:
gcr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GcLGCM259_2092 (rpoB)
DNA repair and recombination proteins [BR:
gcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GcLGCM259_2092 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QCY47807
UniProt:
A0A5B7WV55
LinkDB
All DBs
Position
complement(2355018..2358524)
Genome browser
AA seq
1168 aa
AA seq
DB search
MVASSTSNNQTASSARDAAYAGRLSFAKIHEPLEVPNLLALQTESFDRLIGNERWQERLA
AAVSVGDNSVPDVSGLAEIFEEISPIEDFQETMSLSFSEPEFADPKYSIAECKDRDATYA
APLYVKAEFMNNETGEIKQQTVFMGDFPLMTDKGTFIINGTERVVVSQLVRSPGAYFESA
PDKTSDKTIYSARIIPSRGAWFELEIDKRDQIGVRLDRKRKQSVTVLLKALGWSEEKILA
EFGQYDSVRATLEKDSIKDQNEALLDIYRKLRPGEPPTVEAAQALLRNMYFEPKRYDLAK
VGRYKLNRKLGVETPVNAESALVLSIDDIVAMIRFLVALHAGERTIEGTREGEIVQVPVA
VDDIDHFGNRRIRAVGELIENQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAA
IKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPI
ETPEGPNIGLIGSLATYGRINAFGFIETPYRKVVDGVVTNQVEYLTADDELQHFIAQANA
PLTEDGHFAEDTVLVREKGGGGEPVLVEPGEVTFMDVSPRQMVSVATALIPFLEHDDANR
ALMGANMQRQAVPLLASESPLVGTGMEKYAAVDAGDSVVAQKPGVVTEVSADLVVVMNDD
GTESMYPIMKFARSNQGNAYNQRVRVSEGERVEYQSIIADGPSTDAGELALGKNLLVAFM
SWEGHNFEDAIILSQRMVSDDVLTSIHIEEHEVDARDTKLGAEEITRDIPNVSEDILSQL
DDRGIVYIGAEVEAGDILVGRVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVPHGES
GTVIGVRIFDRDNDDDLSPGVNQLVRVYVAQKRKITNGDKLAGRHGNKGVISKILPIEDM
PFLEDGTPVDVVLNPLGVPGRMNVGQVMEIHLGWAAKQGWTIENEPEWVKDLPNLPRQTG
STTVATPVFDGASEEEIRGILDSVNPTSDGQQLVKNTGKARLFDGRSGEPFPDPISVGYM
YILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEL
LTIKSDDIHGRVKVYEAIVKGENIPEPGVPESFKVLIKEMQSLCLNVEVLGTDGNTIEMR
ESDEESFRAAEELGIDLSRSEPSSVEEV
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgcctcgagcacctctaacaaccaaaccgctagttcggctcgcgacgctgcgtac
gctggccgactttcttttgcaaagattcacgaaccccttgaagtgccgaacctgctggca
ctgcagaccgagagctttgaccggctcatcggtaatgagcggtggcaggagcgcctggcc
gccgccgtgtccgtcggtgacaacagtgtgccggacgtcagcggactggccgagatcttt
gaggagatctccccgattgaagacttccaggagaccatgtccctgagcttctcggagccg
gaattcgccgacccgaagtactcgatcgccgagtgcaaggaccgtgacgccacctacgcc
gccccgctgtacgtcaaggccgagttcatgaacaatgaaaccggcgaaatcaagcagcag
accgtcttcatgggcgacttcccgctgatgaccgacaagggtaccttcatcatcaacggt
accgagcgcgtggtcgtctcccagctggtgcgttccccgggcgcctacttcgagtccgcg
ccggacaagaccagtgacaagaccatctactccgcacgtatcatcccgtcgcgcggtgcc
tggttcgagctggaaatcgacaagcgcgaccaaatcggcgtgcgcctggaccgcaagcgc
aagcagtcggtcaccgtgctgctcaaggccctgggctggagcgaagagaagatcctggcc
gaattcggccagtacgactcggtgcgcgccaccctggagaaggacagcatcaaggaccag
aacgaggccctgctggacatctaccgcaagctgcgtccgggcgagccgccgacggtggaa
gccgcccaggccctgctgcgcaacatgtacttcgagcccaagcgctacgacctggccaag
gtcggccgctacaagctgaaccgcaagctcggcgtggagaccccggtcaacgccgaaagc
gccctggtgctgagcatcgacgacatcgtcgccatgatccgcttcctggttgccctgcac
gccggtgagcgcaccatcgaaggcacccgcgagggcgagatcgttcaggtcccggtcgcc
gtggatgacatcgaccacttcggcaaccgccgtatccgcgcggtcggcgaactgatcgag
aaccaggtccgcaccggcctgtcacgcatggagcgcgtggtgcgtgagcgcatgaccacc
caggacgtggaggcgatcaccccgcagaccctgatcaacatccgcccggtggtggccgcg
atcaaggagttcttcggaacctcgcagctctcccagttcatggaccagaacaacccgctg
gccggcctgacccacaagcgccgcctctcggcactgggcccgggcggtctgtcgcgtgac
cgtgcaggcatggaagtgcgagacgtgcacccctcgcactacggacgcatgtgcccgatt
gaaaccccggaaggcccgaacatcggcctgatcggctcgctggcaacctacgggcgcatc
aacgccttcggtttcatcgagaccccgtaccgcaaggtcgtggacggcgtggtgaccaac
caggtcgagtacctcaccgccgatgacgagctgcagcacttcatcgcccaggccaacgca
ccgctgaccgaggacggtcactttgccgaggacaccgtgctggtgcgtgaaaagggcggc
ggcggcgagccggtgctcgttgagccgggcgaagtgaccttcatggacgtttccccgcgc
cagatggtgtcggtggccaccgccctgatcccgttcctggagcacgacgacgccaaccgc
gcgctgatgggcgccaacatgcagcgccaggccgtgccgctgctggcctccgagtccccg
ctggtgggcaccggtatggagaagtacgccgcggtggacgccggtgactccgtggtcgcg
cagaagcccggtgttgtcaccgaggtctcggccgacctggtcgtggtgatgaacgacgac
ggcaccgagtcgatgtacccgatcatgaagttcgcccgctccaaccagggcaacgcctac
aaccagcgcgtgcgcgtctccgaaggcgagcgcgtggagtaccagtcgatcatcgccgac
ggtccctcgaccgacgccggtgagctggccctgggcaagaacctgctggtcgcgttcatg
tcctgggaaggccacaacttcgaggacgccatcatcctgtcccagcgcatggtctccgac
gatgtgctgacctcgatccacatcgaggagcacgaggttgacgcccgcgacaccaagctg
ggcgccgaggaaatcacccgcgacatccccaacgtgtccgaggacatcctctcccagctc
gatgaccgcggcatcgtctacatcggcgccgaggtcgaggccggggacatcctggtgggt
cgcgtgaccccgaagggtgaaaccgagctgacccccgaggagcgcctgctgcgcgcgatc
ttcggtgagaagtcccgcgaagtgcgtgacacctcgctgaaggtgccgcacggcgagtcc
ggcaccgtgatcggcgtgcgcatcttcgatcgcgacaacgacgatgacctttccccgggc
gtgaaccagctggtgcgcgtctacgtggcccagaagcgcaagatcaccaacggtgacaag
ctcgccgggcgtcacggcaacaagggcgttatctccaagatcctgccgatcgaggacatg
ccgttcctggaggacggcaccccggtggacgtcgtgctgaacccgctgggtgtgcccggg
cgtatgaacgtcggccaggtcatggaaatccacctgggctgggccgccaagcagggctgg
accatcgagaacgagccggagtgggtcaaggacctgccgaacctgccgcgccagaccggt
tcgaccaccgtggccaccccggtgttcgacggtgcctccgaggaggagatccgcggcatc
ctggattcggtgaacccgaccagcgacggccagcagctggtgaagaacaccggcaaggcc
cgcctgttcgacggccgctccggcgagccgttcccggatccgatctccgtgggctacatg
tacatcctgaagctgcaccacctggtggacgacaagattcacgcccgttccaccggcccg
tactccatgatcacccagcagccgctgggcggtaaggcccagttcggtggccagcgcttc
ggtgaaatggaagtgtgggccctggaggcctacggtgcggcttacaccctgcaggaactg
ttgaccatcaagtccgatgacattcacggtcgcgtgaaggtctacgaggcgatcgtcaag
ggcgagaacatcccggagccaggcgttccggaatcgttcaaggtgctcatcaaggaaatg
caatcgctgtgcctgaacgtcgaggtactgggtaccgacggcaacaccatcgagatgcgc
gaatcggacgaggaatcgttccgtgccgctgaagaactgggcatcgacctttcgcggtcc
gagcccagctccgtcgaggaagtctag
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integrated database retrieval system
