Geobacillus sp. 12AMOR1: GARCT_00086
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Entry
GARCT_00086 CDS
T03966
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GARCT_00086 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gea01007
]
GARCT_00086 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gea03016
]
GARCT_00086 (lysS)
Enzymes [BR:
gea01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GARCT_00086 (lysS)
Amino acid related enzymes [BR:
gea01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GARCT_00086 (lysS)
Transfer RNA biogenesis [BR:
gea03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GARCT_00086 (lysS)
Prokaryotic type
Other AARSs
GARCT_00086 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AKM17457
LinkDB
All DBs
Position
87019..88503
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AA seq
494 aa
AA seq
DB search
MSHEELNDQLRVRREKLKKIEELGVDPFGKRFERTHKAEELFELYGDLSKEELEEQQIEV
AVAGRIMTKRGKGKAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKISDLGDIVGVRGTMF
KTKVGELSIKVSSYEFLTKALRPLPEKYHGLKDIEQRYRQRYLDLIMNPESKKTFITRSL
IIQSMRRYLDSHGYLEVETPMMHAVAGGAAARPFITHHNALDMTLYMRIAIELHLKRLIV
GGLEKVYEIGRVFRNEGISTRHNPEFTMLELYEAYADFRDIMKLTENLIAHIATEVLGTT
KIQYGEHLVDLTPEWRRLHMVDAIKEYVGVDFWRQMSDEEARELAKEHGVEVAPHMTFGH
IVNEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNPDDPRFTDRFELFIVGREHANAFTEL
NDPIDQRQRFEEQLKEREQGNDEAHEMDEDFLEALEYGMPPTGGLGIGVDRLVMLLTNSP
SIRDVLLFPQMRHK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagccatgaagaattgaacgaccaactgcgcgtccgcagggaaaagctgaaaaaaatt
gaggaattgggtgtcgatccgtttggcaaacggttcgagcgcacgcataaagcggaagag
ctgtttgaactgtacggagatttgtcaaaagaggaactcgaagagcaacaaatcgaagtc
gccgtcgccggccgcatcatgacgaaacgcggcaaaggcaaagcgggattcgcccacatc
caagacgttacagggcaaattcaaatttacgtccgccaagacgatgttggcgaacagcaa
tacgagctgtttaaaatctccgacctcggcgacatcgtcggcgtgcgcggcacgatgttt
aaaacaaaggtcggcgaactttcgatcaaagtatcgtcgtatgaatttttaacaaaagcg
ctgcgtccgctgccggaaaaataccacggcttaaaagatatcgagcagcgctaccgccaa
cgctacctcgatttaattatgaatccggagagcaaaaagacgttcatcacccgcagtctc
attattcaatcgatgcgccgctatcttgacagccatggctacttggaagtcgaaacaccg
atgatgcacgccgtagcaggcggtgcggcggcgcgcccgttcattacgcatcataatgcg
ctcgatatgacgctgtatatgcggatcgccatcgagctgcatttgaaacggctcatcgtc
ggcggcttggaaaaagtgtatgaaatcgggcgcgttttccggaatgaaggcatttccacc
cgccataacccggagtttacgatgctcgaattgtacgaggcgtatgccgacttccgcgat
atcatgaaattaacggagaacttgatcgctcatattgccacggaagtgcttggcacaaca
aaaatccagtacggcgaacatcttgtcgacttgacgcctgaatggcggcgcctccatatg
gtcgatgcgatcaaggaatatgtcggcgtcgatttctggcggcagatgagcgacgaagag
gcgcgggagctggccaaagaacacggtgtcgaagtcgcgccgcacatgacgttcggccat
atcgtcaatgaattttttgaacaaaaagtagaggataaactgatccagccgacgttcatt
tacggccacccggtcgaaatctcgccattagccaagaaaaacccagacgacccgcgcttt
accgatcggtttgagctgttcatcgtcgggcgcgaacatgcgaacgcctttacggaacta
aacgacccgatcgatcagcgtcaacggtttgaggagcagctgaaggagcgcgaacaagga
aacgatgaagcgcacgaaatggacgaagatttcctcgaagcgctcgaatacggcatgccg
ccgacgggcggactcgggatcggggtcgaccgtctcgtcatgctcttgaccaattcgcca
tccattcgcgacgtgctgctcttcccgcaaatgcgccataaataa
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