Geobacter sp. FeAm09: FO488_10485
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Entry
FO488_10485 CDS
T07988
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
gef
Geobacter sp. FeAm09
Pathway
gef03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gef00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FO488_10485
09124 Replication and repair
03420 Nucleotide excision repair
FO488_10485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gef03021
]
FO488_10485
03400 DNA repair and recombination proteins [BR:
gef03400
]
FO488_10485
Enzymes [BR:
gef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
FO488_10485
Transcription machinery [BR:
gef03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FO488_10485
DNA repair and recombination proteins [BR:
gef03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FO488_10485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEM68554
UniProt:
A0A5C1MBQ2
LinkDB
All DBs
Position
complement(2223682..2226141)
Genome browser
AA seq
819 aa
AA seq
DB search
MTKLIAIPLRDFALPAPRSGSIETHSGYGRQAAEGQEIHTRVQRQRAQADPAYQAEVAIS
GLFERGGYAFRVDGRMDGIFRHDAPRIEEIKSTFNIRELAQHLAAGPMDHPYCLQLLTYG
YCYWREHRVMPALSFHLVSTRSGDSIDQDLVLDTIRYEQWLERRLDELAAEAQQAEKRAL
RRRKVASAFTFPFASPRPGQVELMATIERFMAEKRPMLIQAPTGLGKTVGVLYPVMKEAL
GRGQRVVYVTPKNSQHSVAEDAVTRFQEAGAKLKSLSITAKGKICFMNEPVCNPASCEYA
RDYYGKVHGQGLLQLLARKRRLTARTFRNLGERYRVCPFELQLDSAREADIIICDYNYVF
APRSALGRVADMGVDQTGRPNLVIDEAHNLPARAMEYYSPALSSAVLEQMRGEIRALPPP
FRHEAEALLDGCLQAVAACRPPQGTRPQRIEPPTELFYPRHARLGAFLSRYLDSGVEIPN
QDVILRLCHYWGEFTEALEFVSRPERQEFFTTFHPQASGGLVKITCCDASAMLEDCYGDY
EQVVGFSATLKPFDYYVRLSGLNRERVRTAEFASPFPKERRKLLIIPQISTRYSRRERNY
ARIAEAVRRITALRRGNYFVFLPSFEFLERVASLFEPPAGFAVVRQERGMRASGIAAVVE
NLRSQSTPTIVFAVQGGSFSEGMDYAGEMVIGAFVVGPPLPTYDLEREQMRAYYQQKYAA
GFDYAYTIPAMAKAVQAAGRVIRSETDRGLVVLMDGRFLEPAFSQAMPADWFTADTGEAV
SGSILREVADFWGSGAGEPTAVPPASPHGPDSDEPVGEG
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaagctgatcgccataccgctgcgggattttgccctgcccgccccgcgctccggc
agcatcgaaacccactcgggctacggccgccaggcggccgaggggcaggagatccacacc
agggtgcagaggcagcgggcacaggccgacccggcctatcaggccgaggtcgcaatcagc
ggcctcttcgagaggggagggtacgcattccgggtcgatggccggatggacgggatcttc
cgccacgatgcgcccaggatcgaagagatcaagagcaccttcaacatccgggaactggcg
cagcacctggcggccggccccatggatcatccctactgcctgcaactgctgacctacggc
tactgctactggcgcgaacaccgcgtcatgccggcgctctccttccatctggtctccacc
cgcagcggcgattcgattgaccaggatcttgtcctcgataccatccggtacgaacagtgg
ctggagcgccgcctggacgaactggcggcagaggcgcaacaggccgagaagcgcgccctc
cggcggcgcaaggtcgcctccgcgttcactttcccctttgccagcccccggcccggccag
gtcgaactcatggcgaccatcgagcggttcatggcggagaaacgccccatgctcatccag
gcccccacgggcctggggaagaccgtcggcgttctctatcccgtgatgaaggaagccctg
gggcgggggcagcgggtcgtgtacgtcacgccgaagaacagccagcactccgtggccgag
gacgccgtcacccgttttcaggaggccggggccaaactgaaatccctctccatcaccgcc
aagggaaagatctgcttcatgaacgagccggtgtgcaatcccgcctcctgcgagtatgcc
cgggactattacggcaaggtccatgggcaggggctgctccagctcctggcgcggaagagg
aggcttacggcgcgcacgttccgcaacctgggggagcgctaccgggtctgcccctttgag
ctgcagctggacagcgcccgcgaggcggacatcatcatctgcgattacaactacgtgttt
gccccgcgctcggcgttgggccgcgtggcggacatgggcgtggaccagaccggcaggccc
aacctggtgatcgacgaagcccacaacctgccggcgcgggccatggagtactattcgccg
gcactttcgtccgccgtgctggaacagatgcgcggcgagatacgggcgctgcccccgccc
tttcgccacgaggcggaggcgctcctggacggttgcctccaggccgttgcggcctgccgt
ccgccccagggcacccgtccgcagcggatcgagccccccacggagctgttctacccccgg
cacgcccggctcggcgccttcctctcccgctacctggattcgggcgtggagatccccaac
caggacgtgatcctgcggctctgccactactggggcgagttcacggaggccctggagttc
gtcagccggcccgagcggcaggagttcttcaccaccttccatccccaggcaagcggcggc
ctggtgaagataacctgttgcgacgcctcggcgatgctggaggattgctacggcgactac
gagcaggtggtggggttttctgcgaccctgaaaccctttgactattatgtgcgcctttcc
ggcctgaaccgggagcgggtgcggacggcggaatttgccagcccgtttccgaaggaacgg
cgcaaactcctgatcatcccccagatatccacccgttacagccgccgcgagcgcaattac
gccaggatcgccgaggcggtccggcggataacggcgctacgccggggcaactatttcgtc
tttctgccgagcttcgagtttctggagcgggtcgcctccctcttcgagcctccggcgggc
ttcgctgtcgtgcgccaggagcgggggatgagggcgagcggcatagcggcggtcgtggag
aatctccgcagccaaagtacgccgacgatcgtctttgccgtgcaggggggctccttttcc
gaggggatggactatgcgggggagatggtcatcggggcctttgtggttggaccgccgctg
cccacctacgatctggagcgggagcagatgcgggcctattaccagcaaaagtacgcggcc
ggcttcgactatgcctacaccataccggccatggccaaggcggtccaggccgccggcagg
gtcatccgctccgaaacggaccgggggcttgtcgtcctgatggacgggcgattcctggag
ccggctttcagtcaggcgatgccggccgactggtttactgcggataccggagaggccgtg
tcgggcagcattttgcgtgaggtcgccgatttctgggggagcggggccggggaaccgacg
gcggtaccgcccgcttcgccccacggcccggactcggatgagccggtgggggaggggtga
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