KEGG   Geobacter sp. FeAm09: FO488_10485
Entry
FO488_10485       CDS       T07988                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
gef  Geobacter sp. FeAm09
Pathway
gef03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gef00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FO488_10485
  09124 Replication and repair
   03420 Nucleotide excision repair
    FO488_10485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gef03021]
    FO488_10485
   03400 DNA repair and recombination proteins [BR:gef03400]
    FO488_10485
Enzymes [BR:gef01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     FO488_10485
Transcription machinery [BR:gef03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     FO488_10485
DNA repair and recombination proteins [BR:gef03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     FO488_10485
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD ResIII
Other DBs
NCBI-ProteinID: QEM68554
UniProt: A0A5C1MBQ2
LinkDB
Position
complement(2223682..2226141)
AA seq 819 aa
MTKLIAIPLRDFALPAPRSGSIETHSGYGRQAAEGQEIHTRVQRQRAQADPAYQAEVAIS
GLFERGGYAFRVDGRMDGIFRHDAPRIEEIKSTFNIRELAQHLAAGPMDHPYCLQLLTYG
YCYWREHRVMPALSFHLVSTRSGDSIDQDLVLDTIRYEQWLERRLDELAAEAQQAEKRAL
RRRKVASAFTFPFASPRPGQVELMATIERFMAEKRPMLIQAPTGLGKTVGVLYPVMKEAL
GRGQRVVYVTPKNSQHSVAEDAVTRFQEAGAKLKSLSITAKGKICFMNEPVCNPASCEYA
RDYYGKVHGQGLLQLLARKRRLTARTFRNLGERYRVCPFELQLDSAREADIIICDYNYVF
APRSALGRVADMGVDQTGRPNLVIDEAHNLPARAMEYYSPALSSAVLEQMRGEIRALPPP
FRHEAEALLDGCLQAVAACRPPQGTRPQRIEPPTELFYPRHARLGAFLSRYLDSGVEIPN
QDVILRLCHYWGEFTEALEFVSRPERQEFFTTFHPQASGGLVKITCCDASAMLEDCYGDY
EQVVGFSATLKPFDYYVRLSGLNRERVRTAEFASPFPKERRKLLIIPQISTRYSRRERNY
ARIAEAVRRITALRRGNYFVFLPSFEFLERVASLFEPPAGFAVVRQERGMRASGIAAVVE
NLRSQSTPTIVFAVQGGSFSEGMDYAGEMVIGAFVVGPPLPTYDLEREQMRAYYQQKYAA
GFDYAYTIPAMAKAVQAAGRVIRSETDRGLVVLMDGRFLEPAFSQAMPADWFTADTGEAV
SGSILREVADFWGSGAGEPTAVPPASPHGPDSDEPVGEG
NT seq 2460 nt   +upstreamnt  +downstreamnt
gtgacgaagctgatcgccataccgctgcgggattttgccctgcccgccccgcgctccggc
agcatcgaaacccactcgggctacggccgccaggcggccgaggggcaggagatccacacc
agggtgcagaggcagcgggcacaggccgacccggcctatcaggccgaggtcgcaatcagc
ggcctcttcgagaggggagggtacgcattccgggtcgatggccggatggacgggatcttc
cgccacgatgcgcccaggatcgaagagatcaagagcaccttcaacatccgggaactggcg
cagcacctggcggccggccccatggatcatccctactgcctgcaactgctgacctacggc
tactgctactggcgcgaacaccgcgtcatgccggcgctctccttccatctggtctccacc
cgcagcggcgattcgattgaccaggatcttgtcctcgataccatccggtacgaacagtgg
ctggagcgccgcctggacgaactggcggcagaggcgcaacaggccgagaagcgcgccctc
cggcggcgcaaggtcgcctccgcgttcactttcccctttgccagcccccggcccggccag
gtcgaactcatggcgaccatcgagcggttcatggcggagaaacgccccatgctcatccag
gcccccacgggcctggggaagaccgtcggcgttctctatcccgtgatgaaggaagccctg
gggcgggggcagcgggtcgtgtacgtcacgccgaagaacagccagcactccgtggccgag
gacgccgtcacccgttttcaggaggccggggccaaactgaaatccctctccatcaccgcc
aagggaaagatctgcttcatgaacgagccggtgtgcaatcccgcctcctgcgagtatgcc
cgggactattacggcaaggtccatgggcaggggctgctccagctcctggcgcggaagagg
aggcttacggcgcgcacgttccgcaacctgggggagcgctaccgggtctgcccctttgag
ctgcagctggacagcgcccgcgaggcggacatcatcatctgcgattacaactacgtgttt
gccccgcgctcggcgttgggccgcgtggcggacatgggcgtggaccagaccggcaggccc
aacctggtgatcgacgaagcccacaacctgccggcgcgggccatggagtactattcgccg
gcactttcgtccgccgtgctggaacagatgcgcggcgagatacgggcgctgcccccgccc
tttcgccacgaggcggaggcgctcctggacggttgcctccaggccgttgcggcctgccgt
ccgccccagggcacccgtccgcagcggatcgagccccccacggagctgttctacccccgg
cacgcccggctcggcgccttcctctcccgctacctggattcgggcgtggagatccccaac
caggacgtgatcctgcggctctgccactactggggcgagttcacggaggccctggagttc
gtcagccggcccgagcggcaggagttcttcaccaccttccatccccaggcaagcggcggc
ctggtgaagataacctgttgcgacgcctcggcgatgctggaggattgctacggcgactac
gagcaggtggtggggttttctgcgaccctgaaaccctttgactattatgtgcgcctttcc
ggcctgaaccgggagcgggtgcggacggcggaatttgccagcccgtttccgaaggaacgg
cgcaaactcctgatcatcccccagatatccacccgttacagccgccgcgagcgcaattac
gccaggatcgccgaggcggtccggcggataacggcgctacgccggggcaactatttcgtc
tttctgccgagcttcgagtttctggagcgggtcgcctccctcttcgagcctccggcgggc
ttcgctgtcgtgcgccaggagcgggggatgagggcgagcggcatagcggcggtcgtggag
aatctccgcagccaaagtacgccgacgatcgtctttgccgtgcaggggggctccttttcc
gaggggatggactatgcgggggagatggtcatcggggcctttgtggttggaccgccgctg
cccacctacgatctggagcgggagcagatgcgggcctattaccagcaaaagtacgcggcc
ggcttcgactatgcctacaccataccggccatggccaaggcggtccaggccgccggcagg
gtcatccgctccgaaacggaccgggggcttgtcgtcctgatggacgggcgattcctggag
ccggctttcagtcaggcgatgccggccgactggtttactgcggataccggagaggccgtg
tcgggcagcattttgcgtgaggtcgccgatttctgggggagcggggccggggaaccgacg
gcggtaccgcccgcttcgccccacggcccggactcggatgagccggtgggggaggggtga

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