KEGG   Geobacter sp. FeAm09: FO488_16695
Entry
FO488_16695       CDS       T07988                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
gef  Geobacter sp. FeAm09
Pathway
gef03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FO488_16695 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gef03400]
    FO488_16695 (uvrB)
DNA repair and recombination proteins [BR:gef03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FO488_16695 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FO488_16695 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_16 AAA_22 DUF87 NanE AAA_33
Other DBs
NCBI-ProteinID: QEM69628
UniProt: A0A5C1MG92
LinkDB
Position
complement(3535236..3537251)
AA seq 671 aa
MSPFNLATTYIPRGDQPQAIAELVEGIERGDRHQVLLGVTGSGKTFTVANVIAQTGRPAL
VLAPNKTLAAQLYGEFKELFPDNAVEYFVSYYDYYQPEAYLPTTDTFIEKDSSINDEIDK
MRHSATRSLLTRRDVIIVASVSCIYGIGSPEAYASLHIFFHQGEEYGRDTLLKKLVEIQY
ERNDVDFHRGTFRVRGDVVEVFPAYDSDKALRIEFFGDEVEAISEIDPLRGVVLHKLPKC
AIYPASHYVSTRETLDRAVELIRVDLGERLRYFRERNMLLEAQRIEQRTFYDIEMMEEMG
FCQGIENYSRYFDGRREGEPPYTLIDYFPEDFVLFVDESHITIPQVGGMYRGDRSRKETL
VQYGFRLPAALDNRPLNFQEFEKRIRQAVYVSATPADFEMERSGGVFVEQVIRPTGLVDP
RIEVRPATAGTASVGQVDDLLHEVRETVAKGERVLATTLTKRMAEELTNYYQELGVRVRY
LHSDIDTIERMQILRDLRLGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSARSL
IQTCGRAARNVGGRVLMYADTVTRSMQACIDETERRRVKQLAYNEEFGITPETVKKSMLT
ILNSVEEKDYYTPAGGVAETAEEYVAPREIPKLIKKLRKEMLAAAKALDFESAAKLRDRI
KRLEEMELALR
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgtcccccttcaaccttgccacaacctacatcccccggggcgaccagccccaggccatc
gccgaactggtggaggggatcgagcgcggcgaccggcaccaggtgctcctgggggtgacc
ggctcgggcaagaccttcaccgtggccaacgtcatcgcccagaccggccggccggccctg
gtgctggcccccaacaagaccctggcggcccagctctacggcgagttcaaggaactcttc
ccggacaacgccgtggaatattttgtctcctactacgactactaccagccggaagcgtac
ctccccaccaccgacaccttcatcgagaaggactcgtccatcaacgacgagatcgacaag
atgcgccactcggccacccgcagcctcctgacccggcgcgacgtgatcatcgtggcctcg
gtttcctgcatctacggcatcggctcgcccgaggcctatgccagcctgcacatctttttc
caccagggggaggagtacggccgcgacaccctgctgaaaaaactggtggagatccagtac
gaacgcaacgacgtggattttcaccgcggcaccttccgggtgcggggcgatgtggtggag
gtcttcccggcctacgacagcgacaaggcgctccgtatcgagttcttcggcgacgaggtg
gaggccatcagcgagatcgaccccctgcggggcgtggtgctccacaaactgcccaaatgc
gccatctatccggcctcccattacgtctccacccgcgagaccctggaccgggcggtggag
ttgatccgcgtggacctgggggagcgcctccgctatttccgggagcggaacatgctgctg
gaggcccagcgcatcgagcagcgcaccttctacgacatcgagatgatggaggagatgggc
ttctgccaggggatcgagaactattcccgctatttcgatggccgtagggagggggagccc
ccctataccctgatcgactattttcccgaagatttcgtgcttttcgtggacgaatcccac
atcaccatcccccaggtgggggggatgtaccggggcgaccgcagccgcaaggaaaccctg
gtgcagtacggtttccgcctgccggcggccctggacaaccggccgctcaacttccaggag
tttgaaaagcgcatccgccaggcggtgtacgtctcggccacgccggcggatttcgagatg
gagcggagcggcggtgtcttcgtggagcaggtcatccgccccaccgggctggtggacccg
cggatcgaggtccggccggccacggcggggacggcgtccgtgggccaggtggacgacctc
ctccacgaggtccgcgagaccgtggccaagggggagcgggtgctggcgaccaccctgacc
aagcgcatggccgaggagctgaccaattattaccaggagttgggggtcagggtgcgttac
ctgcactcggacatcgacaccatcgagcgcatgcagatcctgcgcgatctcaggctggga
gagttcgacgtgctggtggggatcaacctgctgcgggaggggctggacctgccggaggtc
tccctggtggccatcctggacgccgacaaggaggggttcctccgttccgcccgctccctg
atccagacctgcggccgggccgcccgcaatgtgggcggccgggtgctgatgtacgccgac
acggtgacccgctccatgcaggcctgcatcgacgagaccgaacgccgccgcgtcaagcag
ctggcctataacgaggagttcggcatcacccccgagacggtgaaaaagagtatgctgacg
atcctgaattccgtcgaggagaaggattactacaccccggcggggggcgtggccgagacg
gccgaggagtatgtggcgccccgggagatccccaagctgatcaagaagctgcgcaaggag
atgctggcggcggccaaggccctggatttcgagagcgccgccaaactgcgggaccggatc
aagcggctggaggagatggagttggcgctgcgttaa

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