Geobacter sp. FeAm09: FO488_16695
Help
Entry
FO488_16695 CDS
T07988
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
gef
Geobacter sp. FeAm09
Pathway
gef03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FO488_16695 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gef03400
]
FO488_16695 (uvrB)
DNA repair and recombination proteins [BR:
gef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FO488_16695 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FO488_16695 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
DUF87
NanE
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QEM69628
UniProt:
A0A5C1MG92
LinkDB
All DBs
Position
complement(3535236..3537251)
Genome browser
AA seq
671 aa
AA seq
DB search
MSPFNLATTYIPRGDQPQAIAELVEGIERGDRHQVLLGVTGSGKTFTVANVIAQTGRPAL
VLAPNKTLAAQLYGEFKELFPDNAVEYFVSYYDYYQPEAYLPTTDTFIEKDSSINDEIDK
MRHSATRSLLTRRDVIIVASVSCIYGIGSPEAYASLHIFFHQGEEYGRDTLLKKLVEIQY
ERNDVDFHRGTFRVRGDVVEVFPAYDSDKALRIEFFGDEVEAISEIDPLRGVVLHKLPKC
AIYPASHYVSTRETLDRAVELIRVDLGERLRYFRERNMLLEAQRIEQRTFYDIEMMEEMG
FCQGIENYSRYFDGRREGEPPYTLIDYFPEDFVLFVDESHITIPQVGGMYRGDRSRKETL
VQYGFRLPAALDNRPLNFQEFEKRIRQAVYVSATPADFEMERSGGVFVEQVIRPTGLVDP
RIEVRPATAGTASVGQVDDLLHEVRETVAKGERVLATTLTKRMAEELTNYYQELGVRVRY
LHSDIDTIERMQILRDLRLGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSARSL
IQTCGRAARNVGGRVLMYADTVTRSMQACIDETERRRVKQLAYNEEFGITPETVKKSMLT
ILNSVEEKDYYTPAGGVAETAEEYVAPREIPKLIKKLRKEMLAAAKALDFESAAKLRDRI
KRLEEMELALR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccttcaaccttgccacaacctacatcccccggggcgaccagccccaggccatc
gccgaactggtggaggggatcgagcgcggcgaccggcaccaggtgctcctgggggtgacc
ggctcgggcaagaccttcaccgtggccaacgtcatcgcccagaccggccggccggccctg
gtgctggcccccaacaagaccctggcggcccagctctacggcgagttcaaggaactcttc
ccggacaacgccgtggaatattttgtctcctactacgactactaccagccggaagcgtac
ctccccaccaccgacaccttcatcgagaaggactcgtccatcaacgacgagatcgacaag
atgcgccactcggccacccgcagcctcctgacccggcgcgacgtgatcatcgtggcctcg
gtttcctgcatctacggcatcggctcgcccgaggcctatgccagcctgcacatctttttc
caccagggggaggagtacggccgcgacaccctgctgaaaaaactggtggagatccagtac
gaacgcaacgacgtggattttcaccgcggcaccttccgggtgcggggcgatgtggtggag
gtcttcccggcctacgacagcgacaaggcgctccgtatcgagttcttcggcgacgaggtg
gaggccatcagcgagatcgaccccctgcggggcgtggtgctccacaaactgcccaaatgc
gccatctatccggcctcccattacgtctccacccgcgagaccctggaccgggcggtggag
ttgatccgcgtggacctgggggagcgcctccgctatttccgggagcggaacatgctgctg
gaggcccagcgcatcgagcagcgcaccttctacgacatcgagatgatggaggagatgggc
ttctgccaggggatcgagaactattcccgctatttcgatggccgtagggagggggagccc
ccctataccctgatcgactattttcccgaagatttcgtgcttttcgtggacgaatcccac
atcaccatcccccaggtgggggggatgtaccggggcgaccgcagccgcaaggaaaccctg
gtgcagtacggtttccgcctgccggcggccctggacaaccggccgctcaacttccaggag
tttgaaaagcgcatccgccaggcggtgtacgtctcggccacgccggcggatttcgagatg
gagcggagcggcggtgtcttcgtggagcaggtcatccgccccaccgggctggtggacccg
cggatcgaggtccggccggccacggcggggacggcgtccgtgggccaggtggacgacctc
ctccacgaggtccgcgagaccgtggccaagggggagcgggtgctggcgaccaccctgacc
aagcgcatggccgaggagctgaccaattattaccaggagttgggggtcagggtgcgttac
ctgcactcggacatcgacaccatcgagcgcatgcagatcctgcgcgatctcaggctggga
gagttcgacgtgctggtggggatcaacctgctgcgggaggggctggacctgccggaggtc
tccctggtggccatcctggacgccgacaaggaggggttcctccgttccgcccgctccctg
atccagacctgcggccgggccgcccgcaatgtgggcggccgggtgctgatgtacgccgac
acggtgacccgctccatgcaggcctgcatcgacgagaccgaacgccgccgcgtcaagcag
ctggcctataacgaggagttcggcatcacccccgagacggtgaaaaagagtatgctgacg
atcctgaattccgtcgaggagaaggattactacaccccggcggggggcgtggccgagacg
gccgaggagtatgtggcgccccgggagatccccaagctgatcaagaagctgcgcaaggag
atgctggcggcggccaaggccctggatttcgagagcgccgccaaactgcgggaccggatc
aagcggctggaggagatggagttggcgctgcgttaa
DBGET
integrated database retrieval system