Gemmobacter aquarius: HYN69_00730
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Entry
HYN69_00730 CDS
T05407
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
geh
Gemmobacter aquarius
Pathway
geh03030
DNA replication
geh03430
Mismatch repair
geh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
geh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYN69_00730
03430 Mismatch repair
HYN69_00730
03440 Homologous recombination
HYN69_00730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
geh03032
]
HYN69_00730
03400 DNA repair and recombination proteins [BR:
geh03400
]
HYN69_00730
Enzymes [BR:
geh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYN69_00730
DNA replication proteins [BR:
geh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYN69_00730
DNA repair and recombination proteins [BR:
geh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYN69_00730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
Motif
Other DBs
NCBI-ProteinID:
AWB47223
UniProt:
A0A2S0UHD4
LinkDB
All DBs
Position
complement(157789..161220)
Genome browser
AA seq
1143 aa
AA seq
DB search
MTNTPRFIHLRVHTEHSLLEGAVPVKKLVKLVAEAKMPAVAVTDTNNMFAALEFSVTAKD
AGVQPIVGCQVSVAYDPAAQGEKLRLPAPVVLLAQDDAGYMNLMKLNSCLYIDKGGQLNQ
VTLDELERYSAGLICLTGGAEGPVGKLLQGGQAAKARALMERLAAIYGDRLYVELQRHPG
EGGRLTEAEAATERGFVEMAYEMRLPLVATNDVYFPKAGMFEAHDALICIAEKAYVDQSQ
PRRRLTPQHYFKTEAEMCALFADLPEALENSVEIARRCAFAAYKRKPILPKFADDEVQEL
RRQANAGLAARLAIIPHAVTVEDYQARLDFELGIIEKMGFPGYFLIVSDFIKWAKDHGIP
VGPGRGSGAGSLVAYALTITDLDPLRYALLFERFLNPERVSMPDFDIDFCMDRREEVIQY
VQDRYGRDKVGQIITFGALLSKAAVRDVGRVLQMPFGQVDRLSKMIPLEGVKPVSITKAL
ADEPRLREAAKEEVVGRMLGYAEQIEGLYRNASTHAAGVVIGDRPLDELVPLYQDPASDM
PATQFNMKWVEAAGLVKFDFLGLKTLTVIQNALDLLALRGVTLDISLIPLDDKPTYELYA
AAKTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGPMENIPVYCEVKNGLRELES
IHPTIDHILAETQGIIVYQEQVMQIAQVMGGYSLGGADLLRRAMGKKIAEEMAKERPKFI
EGAKVTHGIDAKKAGEVFDLLEKFANYGFNKSHAAAYAVVSYQTAYLKANYPVEFMAAVM
NCDIHLTDKLAVYKREVDKLGIKTVAPCVNRSLATFTVVDGQVVYALGALKNVGVEAMKL
IVEARGGKTFATLFDLARRVDLKRVGKRPLEMLARAGAFDMLDPNRARVFEGLDGLVAYS
AAVHEAKASNQVSLFGEAGTDIPEPRIASRDDWLPVERLGHEHQAVGFYLSGHPLDDYMA
PLKRRNVMTLTELTAKAERGPLVAKLAGSVSSRQERKSAKGNRFAFVQLSDPTGLYEVTV
FSDTLEAAREHLEPGKNVVLTVEANLEGDTLKLLCRGAQPIDQVAAEGGASALRIHLNKA
EAAASVAALFARVEGRNKAQITICVPDDQGREIDLTLPQPYPITPQIKGAIKAMAGVVLV
EEL
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacacgccccgattcatccacctgcgggtgcacacggaacattcgctgctggaa
ggcgcggttccggtcaagaagctggtcaagctggtggccgaggcgaagatgcctgcggtc
gcggtgaccgacacgaacaacatgttcgcggcgctggagttttcggtcacggccaaggat
gcgggggtgcagcccatcgtgggctgtcaggtctcggtggcctatgaccctgccgcgcag
ggggaaaagctgcggttgcctgcgcctgtcgttctgctggcgcaggacgatgcagggtat
atgaacctgatgaagctgaattcctgcctttatatcgacaagggcgggcagcttaatcag
gtcacgctggacgagttggagcggtattccgcagggctgatctgcctgaccggcggggcc
gaggggccggtgggcaagctgttgcagggcgggcaagccgccaaggcgcgggcgctgatg
gagcggttggccgcgatttacggcgaccggctttacgtcgaattgcagcgtcaccccggc
gagggcgggcggttgaccgaagccgaggcagcaaccgagcgcggattcgtcgagatggct
tacgaaatgcgcctgccgctggtggcgaccaatgacgtctatttcccgaaagcgggcatg
ttcgaggcgcatgacgcgctgatctgcattgccgaaaaggcctatgtcgaccagagccag
ccgcgccgccgcctgacgccgcagcactatttcaagaccgaagccgaaatgtgcgcgctg
ttcgcggacctgcccgaggctttggaaaactcggtcgagatcgcgcggcgctgtgccttt
gccgcctacaagcgcaagccgatcttgcctaagttcgcggatgacgaggtgcaggaattg
cgccgtcaggccaatgcggggttggcggcgcggttggccatcattccccatgcggtgacg
gtcgaggactatcaggctcgtttggatttcgagctgggcatcatcgagaagatggggttt
cccggctatttcctgatcgtgtcggatttcatcaaatgggccaaggaccacgggattccg
gtcggaccggggcgggggtcaggggcggggtcgctggttgcctatgccctgaccatcacc
gatcttgacccgctgcgttacgcgctgctgttcgagcggtttttgaaccccgagcgggtt
tcgatgcccgacttcgacatcgacttttgcatggatcgccgcgaggaggtgatccagtat
gtgcaagaccgctacgggcgcgacaaggtggggcagatcatcacattcggcgcgctgctg
tccaaggccgccgtgcgcgatgtgggacgggtcttgcagatgccctttgggcaggtggac
cgcctgtcgaagatgatcccgctggaaggcgtgaagccggtttcgatcaccaaggccttg
gccgacgagccgcgcctgcgcgaggcggcgaaggaagaggtggtgggccggatgctgggc
tatgccgagcagatcgaggggctttaccgcaacgcatcgacccatgccgcaggtgtggtg
ataggggaccgcccgctggatgaattggtgccgctgtaccaagaccctgcgtcggacatg
cctgccacgcagttcaacatgaaatgggtcgaagcggccggcttggtcaagttcgacttt
ctggggttgaagacgctgaccgtgatccagaacgcgctggacctgctggcgttgcgcggg
gttacgctggatatcagcctgatccccctggacgacaagccgacctacgagctttacgca
gccgccaagacggttgcggtgtttcaggtggaatccagcggcatgatggatgcgctgcgg
cgcatgaagcccacctgtatcgaggatatcgtggcgctggtggcgctgtaccgtcccggc
ccgatggagaacattccggtctattgcgaggtcaagaacgggctgcgcgagttggagtcg
atccatccgaccatcgaccatattctggccgagacgcaggggatcatcgtctatcaggaa
caggtgatgcagatcgcgcaggtcatgggcgggtattcgcttggcggggccgaccttttg
cggcgtgcgatgggtaagaagatcgccgaggaaatggcgaaggaacggcccaagttcatc
gaaggggccaaggttacgcacgggatcgacgccaagaaggcgggcgaggtcttcgatctg
ctggagaaattcgccaattacgggttcaacaagtcgcacgctgccgcttacgccgtggtt
tcttaccagacggcttacctcaaggcgaactatccggtcgagttcatggccgccgtgatg
aactgcgatatccacctgaccgacaagctggccgtctataagcgcgaggtcgacaagctg
gggatcaagacggtggcgccttgcgtcaaccggtcgctggcgacgtttacggtggtggac
gggcaggtcgtttacgcgcttggcgcgttgaagaacgtgggcgtcgaggcgatgaagctg
atcgtggaagcgcggggggggaagacctttgccacgctgttcgatctggcgcggcgggtg
gatttgaagcgcgtgggcaagcgcccgctggagatgctggcgcgggctggggcctttgat
atgctcgaccccaaccgcgcgcgggtgttcgaggggctggacgggctggtcgcctattcg
gcggcggtgcacgaggccaaggcgtcaaatcaggtgtcgctgttcggcgaggccggaacg
gatattcccgagccgcggattgccagccgcgacgactggttgccggtggaacggctgggg
catgagcatcaggcggtgggcttctacctgtcggggcatcccttggatgattacatggcc
ccgctcaaacggcgcaatgtgatgacgctgacggaattgaccgccaaggccgagcggggg
ccgctggtggccaagctggcgggttcggtgtcgtcgcggcaggagaggaaatcggccaag
ggcaaccgctttgcattcgtgcaactgtcagacccgacggggctgtacgaggtgacggtg
ttttccgacacgctggaagcggcgcgcgagcatctggaaccgggcaagaacgtggtgctg
acggtcgaggcgaaccttgagggggatacgctgaagctgctctgccgtggcgcgcagccg
attgaccaggtggcggcggaaggcggggcgtcggccttgcgtatccatctgaacaaggcg
gaagcggcggcttcggtcgcggctttgttcgcccgtgtcgaggggcgcaacaaggcgcag
atcaccatctgcgtgcccgacgatcagggccgcgagatcgacctgaccttgccgcagccc
taccccatcacgccgcagatcaagggggcgatcaaggcaatggcaggcgtggtgctggtg
gaagagctttag
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integrated database retrieval system