Gemmobacter aquarius: HYN69_01100
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Entry
HYN69_01100 CDS
T05407
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
geh
Gemmobacter aquarius
Pathway
geh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
geh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYN69_01100 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geh03019
]
HYN69_01100 (recQ)
03400 DNA repair and recombination proteins [BR:
geh03400
]
HYN69_01100 (recQ)
Enzymes [BR:
geh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYN69_01100 (recQ)
Messenger RNA biogenesis [BR:
geh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HYN69_01100 (recQ)
DNA repair and recombination proteins [BR:
geh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HYN69_01100 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
Rhodanese
ResIII
Motif
Other DBs
NCBI-ProteinID:
AWB47288
UniProt:
A0A2S0UHI1
LinkDB
All DBs
Position
complement(246123..248165)
Genome browser
AA seq
680 aa
AA seq
DB search
MQDPTALLSSIFGFSGFRPGQAEIVDAVMAGKNTLAIMPTGGGKSLCFQLPALCRDGVTV
VISPLIALMRDQVRSLRETGVEAGALTSGNTDEETESVFAALDAGSLKLLYMAPERLASS
GTLALLRRINTTLIAVDEAHCVSQWGHDFRPDYLRIGELRRSLGVPLAAFTATADEETRA
EIVTRLFDGVQPETFLRGFDRPNIHLAFAVKDTPRTQILRFAAARKGQSGIVYCATRAKT
ETLGQALREAGHSACHYHGGMEAEDRRRVEIRFQREDGLIVVATIAFGMGIDKPDIRWVA
HADLPKSIEGYYQEIGRAGRDGAPAETLTLYGQDDIRLRRSQIDEGVAPPDRKAADHARL
NALLGLAEATACRRQVLLGYFGETSEPCGNCDLCDRPADLFDATDAVRKALSAILRTGEW
FGAGHLIDILTGTPTPKVKERGHDQLPTYAVGRDLTKPAWGAVFRQMMGRDLVRPDPDRH
GALRMTDAARPILRGEENITLRRDTVASAQPRVAIKTLTSDEDAPLMSALKAKRRALAEQ
ANVPAYVIFPDRTLAEMAEKRPANLDEFARINGVGAKKLESYGTAFLTVINGAAAELHPQ
RMRLAGRDAGQVYDRLADEQLRLSRGEDGTGKYLSVTHSTLRQIAELRPSTIPELDRIQG
MGAQKTERFGEAFLGVLRDA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacccgaccgcccttctgtcctcgatcttcggcttctccggctttcgccccggt
caggcggaaatcgtcgatgcggtcatggcgggcaagaacacccttgccatcatgccaacg
ggcggcggcaaatcgctctgcttccagcttcccgcgctctgccgtgatggcgttaccgtc
gtcatctcgccgctcatcgccctgatgcgcgatcaggtccgctcgcttcgcgaaaccggc
gtcgaagccggcgccctgacatccggcaacaccgacgaggaaaccgaaagcgtcttcgcc
gccctcgacgcagggagcctgaaactgctctacatggcccccgaacgcctcgcctcctcc
ggcacgctggccctgctgcgccgcatcaacaccaccctcatcgccgtggacgaggcgcat
tgcgtgtcgcaatggggccacgacttccgccccgattacctgcgtatcggcgaactgcgc
cgttcgctgggcgtcccgctcgccgccttcaccgccacagcggatgaagaaacccgcgcc
gaaatcgtcacccgcctgttcgacggcgtgcagcccgaaacctttctgcgcggcttcgac
cggcccaacatccacctcgcctttgcggtcaaagacacgccccgcacgcagatcctgcgc
tttgccgccgcgcggaagggccagtcgggcatcgtctactgcgccacccgcgccaagacc
gaaaccctcggccaagctttacgcgaagcgggccactccgcctgccactatcacggcggg
atggaggccgaagaccgccgccgcgtcgaaatccgtttccagcgtgaagacgggctgatc
gtcgttgccaccatcgccttcggcatgggcatcgacaaacccgatatccgctgggtcgcc
cacgccgacctgcccaaatccatcgagggctactatcaggaaatcggccgcgccggacgc
gacggcgcacccgccgaaaccctcaccctctacgggcaggatgacatccgcctgcgccgc
tcccagatcgacgaaggcgtggccccgcccgaccgcaaggccgccgatcacgcccgcctc
aacgcgctcctcggccttgccgaagccaccgcctgccgccgtcaggtgctgctcggctat
ttcggcgaaacctccgaaccctgcggcaactgcgacctctgcgaccgccccgccgacctg
ttcgacgccaccgatgccgtgcgtaaggcgctgtccgcgatccttcgcaccggcgaatgg
ttcggcgcgggccacctcatcgacatcctgaccggcaccccgacgcccaaggtcaaggaa
cgcggccacgaccagcttcccacctatgccgtgggacgcgacctgaccaaacccgcatgg
ggcgcggtgttccgccagatgatgggccgcgacctcgtccgccccgaccccgaccgccac
ggcgccctccggatgaccgatgccgcccgccccattctgcggggcgaggaaaacatcacc
ctgcgccgcgacaccgtggcttccgcccaaccccgcgtggcgatcaaaaccctgacctcg
gacgaagacgcccccctgatgtcggccctgaaagccaagcgccgcgcgctggccgaacag
gccaacgttcccgcctatgtcatcttccccgaccgcacacttgccgaaatggccgaaaag
cgccccgccaacctcgatgaattcgcccgcatcaacggcgttggcgcgaagaaactggaa
agctacggcacagccttccttaccgtcatcaacggcgccgccgccgaactccacccccag
cgcatgcgccttgccggacgcgacgcgggccaagtctacgaccgcctcgccgatgaacaa
ctccgcctctcgcgcggcgaggatggcaccggcaaatacctctccgtcacccattccacc
ctgcgccagatcgccgaactgcgcccctcgaccatccccgaactcgaccggatacagggc
atgggcgcccaaaagaccgaacgcttcggcgaagctttcctcggcgtcttgcgcgacgcc
tga
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