Gelria sp. Kuro-4: kuro4_27590
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Entry
kuro4_27590 CDS
T07432
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gek
Gelria sp. Kuro-4
Pathway
gek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
kuro4_27590 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gek03019
]
kuro4_27590 (cshA)
03009 Ribosome biogenesis [BR:
gek03009
]
kuro4_27590 (cshA)
Enzymes [BR:
gek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
kuro4_27590 (cshA)
Messenger RNA biogenesis [BR:
gek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
kuro4_27590 (cshA)
Ribosome biogenesis [BR:
gek03009
]
Prokaryotic type
rRNA helicases
kuro4_27590 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_RecD
AAA_19
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
BCV25986
UniProt:
A0A9C7B6T3
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All DBs
Position
2793093..2794520
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AA seq
475 aa
AA seq
DB search
MKALTTFDQLGLSPAVLEAVSNMGFEETTPIQAETIPLSLAGRDVIGQAQTGTGKTAAYG
IPLVEQVDPQQGQIQALVVTPTRELAMQVAEELNRVGQFKHVRALPIYGGQDINRQIRAL
AKGQHIVVGTPGRLLDHLRRRTVRLAHIKAVVLDEADEMLNMGFIDDIKAILREVPAEHQ
TMLFSATMPEPIRSLAEQFMHDPELIAIRPKELTVPAIEQHYLEVPERQKFDVLCRLLDL
EAPDLAIVFGRTKRRVSELAEALAKRGYATEGIHGDLTQAQRDNVMRQFRERTIEVLVAT
DVAARGLDVSGVTHVFNFDVPQDPEGYVHRIGRTGRAGKAGAAITFVTPREMNQLRQIEQ
LIKRKIPRRPVPTLTETIEGQKRLTVEKLLETVESADVERYKAVAENLLEETDSVLLLAA
ALKLLTREPTTTPIELSVEAPPRRRVRPRGGSRHGQVRGKTAPHKRSHGDTRHRP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagcactgactacctttgaccaattgggattgagcccagccgtgcttgaggccgta
agcaacatgggctttgaagaaaccacgccgattcaggcggaaaccattcctttgtccctg
gccggtcgggacgttatcggccaagcgcagaccggcaccggcaaaacagcggcctatggg
attcccctggtggaacaggtggatccgcagcagggccaaattcaagccctggtggtcaca
cctacccgggagctggccatgcaggtcgccgaggagctcaaccgggtcgggcagttcaag
cacgtgcgggcgctgccgatttacggcggccaggacatcaaccgtcagatccgggcgctg
gccaaaggacagcacatcgtggtcggcaccccgggacgcctgctggaccacctgcggcgc
cggacggtccgcctggcccacattaaggccgttgttctggatgaagccgacgaaatgctg
aacatgggtttcattgatgacatcaaggccatcctgcgcgaggttccggccgagcatcaa
accatgctcttttccgccaccatgcccgagccgattcggagcctggccgaacagttcatg
cacgacccagagctgatcgccattcgcccgaaggaactaaccgtgccggccatcgagcag
cactacctggaggtgccggaacggcagaagttcgacgtgctctgccgcctgctcgatctc
gaggccccggacctggccatcgtctttggacggaccaagcgccgggtaagcgaactggcc
gaggccctggctaaacgcggctatgccaccgaaggcatccacggtgatctaacccaggcc
cagcgggacaatgtaatgcggcagtttcgcgagcgaaccattgaagtcctggtggcgacc
gatgtggccgcccgcgggctggacgtaagcggcgtcacccatgtcttcaacttcgacgtc
ccgcaggacccggaaggttacgttcaccgcatcggccgcaccgggcgggccggaaaagcg
ggcgcggccatcaccttcgtcaccccgcgggaaatgaaccagctgcggcagatcgagcag
ctgatcaaacgcaaaataccgcgccgccccgtgcccacgctcaccgagaccatcgagggt
cagaagcgcctcacggtggaaaaactcctcgaaaccgtagagtccgccgacgtggagcgc
tataaggcggtggcggaaaacctgctcgaggaaaccgattctgtgctgctcctggccgca
gcgctcaagctcctcacccgcgagccgaccaccacgccgatcgaactcagcgtcgaagcg
ccgccccgccggcgggtacgcccccggggcggcagccggcacgggcaggtgcgaggtaag
accgcaccgcacaaacggagtcacggcgacacccggcaccgtccttag
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