Gemella sp. ND 6198: CG018_06325
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Entry
CG018_06325 CDS
T05584
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
geq
Gemella sp. ND 6198
Pathway
geq00730
Thiamine metabolism
geq01100
Metabolic pathways
geq01240
Biosynthesis of cofactors
geq04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
geq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CG018_06325
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CG018_06325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
geq03016
]
CG018_06325
Enzymes [BR:
geq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CG018_06325
Transfer RNA biogenesis [BR:
geq03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CG018_06325
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GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
ATP_bind_3
CNDH2_C
ACT_4
DUF6044
Motif
Other DBs
NCBI-ProteinID:
AXI27040
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Position
1378141..1379382
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AA seq
413 aa
AA seq
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MEYSHIIIRYGELTLKSGNRNEFLKKLTKNIRYNLQGLKGFHIQTKRDRMYIHFDNNDYI
DEIIEKLKHIPGIHNFSPVLRADLNIDKAKKIIDSLLNTKLDKNYTFKIQTKRSNKHFDY
NTNELNNIFGSYVLVNYPNLKVNVKQPDFIINVEVRSEGIFIFTDFIKGVGGFPVNTSSK
ALLLLSGGIDSPVAAHTLQVKGVEVEMIHFQSPPFTSQDALNKIFDLTTKLSEVVGRVKL
HVVNFTELQTEIVKRIPSNYTMTSTRRFMLSIAEEVAKKEDCLAIATGESLGQVASQTLE
SMNCINAVTNMPILRPLLTMDKVDIIKIATEIGTLKISNLPFEDCCTIFTPKSPKTKPKL
EKIVEYEMRDDYSELIKKTLASIETYLFDKNGKVTTKNIEIEKNLQDEFSDLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtggaatatagtcatattataatcagatatggggaacttactctaaaatctggtaacaga
aatgaatttttaaaaaaattaacaaaaaatattcgttataatttacagggattaaaagga
tttcatattcaaactaaacgagatagaatgtatattcattttgataacaacgattatata
gatgaaatcatagaaaaattaaaacacatacccggaattcataatttttcaccggtatta
cgtgctgatttgaatatagataaagcaaaaaaaataatagatagtttattgaatacaaaa
ttagataaaaattacacatttaaaatccaaactaaaagatcgaataaacattttgattat
aatactaatgaattaaataatatttttggaagttacgtattggtaaattacccaaatttg
aaagtaaatgtaaaacaaccggattttattattaatgtagaggtacgaagtgaagggatt
tttattttcacagattttataaaaggtgttggaggttttcctgtaaatacatcatcaaaa
gcattattattgctttctggcggtattgactcaccggtggcagctcatactttgcaggta
aaaggtgttgaagtggaaatgattcactttcaatcaccaccattcacatcccaagatgct
ttgaataaaatttttgatttaacaacaaaacttagtgaagtagtaggaagagtaaaatta
catgtggtaaattttacagaattacaaacagaaatagtaaagagaataccatctaattat
actatgacttcaacacgccgttttatgttgagtatagcggaagaagttgcgaaaaaagaa
gattgtcttgctatagcaaccggggaatcattaggtcaggtagcaagtcaaacactggaa
tcaatgaactgcattaatgctgttaccaatatgccgatattacgtccgctattaacaatg
gataaagttgatataataaaaattgcaactgagataggcactttgaaaatttctaattta
ccatttgaagattgttgtactatttttacaccaaaatcgcctaaaacaaaaccaaaatta
gagaaaatagtagaatatgaaatgcgtgatgattattcagaactaattaaaaaaacttta
gcgagtatagaaacttatttatttgataaaaatggaaaagtaacaactaaaaatatagaa
atagaaaaaaatttacaagatgaattttcagatttattataa
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