Geomonas oryzisoli: KP004_05085
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Entry
KP004_05085 CDS
T07282
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00260
Glycine, serine and threonine metabolism
ger00630
Glyoxylate and dicarboxylate metabolism
ger00670
One carbon pool by folate
ger00680
Methane metabolism
ger01100
Metabolic pathways
ger01110
Biosynthesis of secondary metabolites
ger01120
Microbial metabolism in diverse environments
ger01200
Carbon metabolism
ger01230
Biosynthesis of amino acids
ger01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KP004_05085
09102 Energy metabolism
00680 Methane metabolism
KP004_05085
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KP004_05085
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KP004_05085
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KP004_05085
Enzymes [BR:
ger01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KP004_05085
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QWV94564
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Position
1141441..1142688
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AA seq
415 aa
AA seq
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MSVLETFDPAVAEVIRHETERQEYNLELIASENFVSQAVLEAQGSVLTNKYAEGYPGKRY
YGGCHEVDKVENLAIERAKELFGADHVNVQPHSGSQANMAVYFSVLKPGDTVLGMNLAHG
GHLTHGSPVNFSGKLFNIVPYGVSQETQTIDYEECERLAVEHKPKMIVVGASAYPRVIDF
EAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMIMCRE
DWAKTLNSNIFPGIQGGPLMHVIAAKAVAFKEALTPEFKQYQQQIVKNAQALAAGLMSRG
FKLTSGGTDNHLMLVDLSQTELTGKVAEEALDRAGITVNKNGIPFDTRSPFITSGIRIGT
PAATSHGLKEAEMEQVAGFIAEVLGNVGDEAKLAAVKTQVNALMKRFPMYADRLK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtactggaaacattcgacccggcagtggcagaagtcatcaggcacgagactgag
cgccaggagtacaacctcgaactgatcgcctcggagaacttcgtctcgcaggccgtgctc
gaggcgcagggatcggtccttaccaacaagtacgccgaggggtatcccggcaagcgttac
tacggtggctgccacgaggtcgacaaggtcgagaacctggccatcgagcgcgccaaggaa
ctgttcggcgccgaccatgtcaacgttcagccgcactccggttcccaggccaacatggcg
gtctacttctccgtgctgaagccgggcgacaccgtgctgggcatgaacctcgcccacggc
ggtcacctgacccacggctccccggtcaacttctccggcaagctcttcaacatcgttccc
tacggcgtctcccaggagacccagaccatcgactacgaagagtgcgagcgtctggccgtc
gagcacaagccgaagatgatcgtggtgggcgcctccgcctacccgcgcgtcatcgacttc
gaggccttccgtcgcatcgccgacaaggttggcgccgtggtcatggtggacatggctcac
atcgccggcctcgttgccgccggtctgcacccgagcccggttccctacgccgagttcgtc
accaccaccacccataagaccctgcgcggaccgcgcggcggcatgatcatgtgccgcgag
gactgggccaagaccctgaactccaacatcttcccgggcatccagggcggcccgctgatg
cacgtcatcgccgccaaggcggtcgcgttcaaggaagcgctcacccccgagttcaagcag
taccagcagcagatcgtgaagaacgcccaggcgctcgccgcaggcctcatgagccgcggc
ttcaagctcacctccggcggcaccgacaaccacctgatgctggtcgacctctcccagacc
gagctgaccggcaaggttgccgaggaagcgctcgaccgcgccggcatcaccgtgaacaag
aacggcatccccttcgacacccgttcgccgttcatcacctccggtatccgtatcggtacc
ccggcagccaccagccacggcctcaaagaagccgagatggagcaggtggcaggcttcatc
gccgaggttctgggcaacgtgggtgacgaagccaagctcgccgccgtgaagacccaggtg
aacgcgctgatgaagcgtttcccgatgtacgccgaccgcctgaagtaa
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