Geomonas oryzisoli: KP004_16040
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Entry
KP004_16040 CDS
T07282
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ger
Geomonas oryzisoli
Pathway
ger02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KP004_16040 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ger02000
]
KP004_16040 (msbA)
Enzymes [BR:
ger01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
KP004_16040 (msbA)
Transporters [BR:
ger02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KP004_16040 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_30
AAA
ABC_ATPase
Zeta_toxin
AAA_5
AAA_25
DUF808
SRP54
AAA_29
ATP-synt_ab
AAA_19
TMEM175
TsaE
NB-ARC
RsgA_GTPase
AAA_28
PMP1_2
Motif
Other DBs
NCBI-ProteinID:
QWV92679
LinkDB
All DBs
Position
complement(3655384..3657126)
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AA seq
580 aa
AA seq
DB search
MSSAAPVKTNVFQRLLGYSRPYGWRIALAALGSVGVGGMDGAMAYLVEPVLRRIFSGKET
AIFVLLPLGIVFLYALRGLCRYTNDYFIRSAGQLAVQDVRNDLYAKNMSLSIGYFHRHET
GTLMSRVLSDVSMMQEGVGQVITGLFRDGLSAVALLGVIFYRDWQLALISFVVIPLTVVP
ARKIGKRIKRVARQGQEKMGDLASILQETYSGIKVVKAFGLEDREIERFRARNRDFYHFT
RKNIKYEGLSTPIMEFITSFGIAAVIWVGGSNVMHGTKSASEFFSFITAMVLVFNPIKRL
LTAFNNLQRSMGAAERVFEVMDEKPEIVDAPNARDLGKARGEVEFRDVRFKYEDDYVLQG
VNLTAKRGEVIALVGPSGGGKTTLVSLITRFYDPTGGQVLMDGVDIRERTMKSLLEQIAL
VDQETILFNDTIANNIRYGRMTATDAEVEAAARAAFAHDFIQELPEGYLTNIGDRGVRLS
GGQRQRLCIARAILKDAPILILDEATSALDTESEQMVQQALNNLMQNRTTFVIAHRLSTI
THADRIVVLEKGAVAEMGSHEDLLQAEGIYSRLHGMQFRA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgcagcacccgtaaaaaccaacgtatttcaacgactgttaggctacagtcgt
ccctatggctggcgcatcgcgctcgccgcgctcggctcggtcggcgtgggcggcatggac
ggcgccatggcctacctggtggagccggtcctgagaaggatcttctccggcaaggagacg
gccatcttcgttttgctcccgctggggatcgtcttcctctacgccctgcgcggcctgtgc
cgctataccaacgactacttcatccgcagtgccggtcagctcgccgtccaggacgtccgc
aacgacctctacgcgaagaacatgagcctcagcatcggctacttccaccgccacgagacc
ggcacgctgatgtcgcgcgtcctctccgacgtcagcatgatgcaggaaggggtggggcag
gtgatcaccggcctgttccgcgacggcctctccgccgtggcgcttctgggcgtcatcttc
taccgtgactggcagctcgcgctgatctcgttcgtggtcatcccgctcaccgtggtgccg
gccaggaagatcggcaagaggatcaagcgcgtggcgcgccagggacaggagaagatgggg
gatctcgccagcatcctgcaggagacctattccggcatcaaggtggtcaaggcgttcggc
ctggaggatcgtgagatcgagcgcttccgggcgcgcaaccgcgacttctaccacttcacc
cggaagaacatcaagtacgaggggctttccaccccgatcatggagttcatcacctccttc
ggcatcgccgcggtgatctgggtcggcggcagcaacgtcatgcacggcaccaagagcgcc
tcggagttcttctccttcatcaccgccatggtgctggtgttcaacccgatcaaaaggctc
ctgaccgcgttcaacaacctgcagcgctccatgggcgccgccgagcgggtcttcgaggtc
atggacgagaagccggagatcgtggacgcgccgaacgcccgcgacctcggcaaggcgcgc
ggcgaggtcgagttccgcgacgtccgcttcaagtacgaggacgactacgtgctgcagggg
gtgaacctcaccgccaagcggggcgaggtgatcgccctcgtcggtccctccggtggcggc
aagaccacgctggtctcgttgatcacccgcttctacgatccgaccggcggccaggtcctc
atggacggcgtggacatccgcgagcgcaccatgaagagcctgctggagcagatcgcgctg
gtcgaccaggaaaccatcctgttcaacgacaccatcgccaacaacatccgctacggcagg
atgaccgcgaccgacgccgaggtcgaggccgcggcccgggccgccttcgcccacgacttc
atccaggaactgcccgaggggtacctgaccaacatcggggatcgcggcgtgcgcctctcc
ggcggccagcgccagaggctctgcatcgcccgcgcgatactcaaggacgcgcccatcctg
atcctggacgaggccaccagcgcgctggacaccgagagcgagcagatggtgcagcaggcc
ctcaacaacctgatgcagaaccggaccaccttcgtcattgcgcaccggctctccaccatc
acccatgccgaccgcatcgtggtgctcgagaagggggcggtggccgagatggggagccac
gaagacctgctccaggccgaagggatctacagccgcctgcacggcatgcagttcagggcg
taa
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