KEGG   Geothrix oryzae: GETHOR_13930
Entry
GETHOR_13930      CDS       T09137                                 
Symbol
nrdJ
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
gex  Geothrix oryzae
Pathway
gex00230  Purine metabolism
gex00240  Pyrimidine metabolism
gex01100  Metabolic pathways
gex01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:gex00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    GETHOR_13930 (nrdJ)
   00240 Pyrimidine metabolism
    GETHOR_13930 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gex03400]
    GETHOR_13930 (nrdJ)
Enzymes [BR:gex01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     GETHOR_13930 (nrdJ)
DNA repair and recombination proteins [BR:gex03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    GETHOR_13930 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N Ribonuc_red_lgN DUF6390
Other DBs
NCBI-ProteinID: BDU69292
UniProt: A0ABN6UYQ5
LinkDB
Position
complement(1574910..1578308)
AA seq 1132 aa
MKIARHFTKAGHDPLEGIPFVPRTSRISKLDGTVVFEAKDVMVPDTWSQVAVDILAQKYF
RRKGIDAQNGGEKDARQVFHRLAGCWRHWGETHGYFDSAEDAQAFYDELTLMLAKQMCAP
NSPQWFNTGLHFAYGISGPAQGHSFVDPKTGEMMKSTSAYERPQPHACFIQSVADDLVNE
GGIMDLWTREARIFKYGSGTGTNFSKVRGSEEPLSGGGRSSGLMSFLAVGDRAAGAIKSG
GTTRRAAKMVCLDLDHPDIEAFIDWKVAEERKVAMLAAGSAVVRRHWDAICRTVEGSTSR
DADPKTNEALRKALARAKREGVPAAFLTQCLGRLAEGDFARDLAGYDTSWDGEAYLTVGG
MNSNNSVRVPDAFMRSLEMDGDWELKRRIDGKTSKKLRAKDLWEKVNRAAWTCADPGIQF
NTTINDWHTCPEDGPINASNPCSEYMFLDDTACNLASLNLCTFLTDDGGFDLAGYRHAIR
LWTVVLEISVLMAQFPSESIAKLSYDFRTLGLGYANLGAMLMRMGIPYDSVEGTQWCAAL
TALLTGDAYAASAEMAHELGPFPGYQKNAAHMLRVIRNHRRAAYNAPASEYEQLSIRPQG
LHGAGVPKRIVEAARESWDTALTYGEQWGFRNAQVTVLAPTGTIGLLMDCDTTGVEPDFA
LVKFKKLAGGGYFKLVNGAIPEALARLGYAPTQIHEIERHVVGWQQITDETPGITRSMLK
GAGWAEEEIASVEQKLPTAFDPAYAIDVERLKNDFSPEQVETFLLALSGTMTVEGAPHLK
DEHLPIFDCANRCGRTGRRYIAPVGHLKMMGAAQPFLSGAISKTINLPAEATVAEIGSIY
EASWQLMLKAVALYRDGSKMSQAMATNLDLLDGVDTLLDEQATGTEKTPAVAQALTQQLV
RTYRRRLPNRRGGYTQAATIGGTKLYLRTGEYEDGSLGEIFLDIHKEGAAFRAVLNCFAI
AVSMGLQHGVPLEEFCDAFLFTRFEPGGMVAGSDTIKLSTSLIDFVFRELAISYLGRYDL
AHVEPEQLVNAATGLRPNSQAPGANLPNLPTGTPLPFPEATGSISTPTVAQPTLQPVAQP
VTVGARTTVSAAQAAREKGYTGDPCPECGHLTLVRNGACMKCQTCGATTGCS
NT seq 3399 nt   +upstreamnt  +downstreamnt
atgaagattgcccgccacttcacgaaggcaggtcacgaccccctggaagggatccccttc
gtcccccggaccagccgcatctccaagctcgacggcacggtggtcttcgaggccaaggat
gtgatggtcccggacacctggtcccaggtggccgtggacatcctggcccagaaatacttc
cgccggaagggcatcgacgcccagaacggcggcgagaaggacgcgcgccaggtcttccac
cggctggcgggctgctggcggcactggggcgagacgcacggctacttcgattccgccgag
gatgcccaggccttctacgacgagctcaccctcatgctcgccaagcagatgtgcgccccc
aactcgccgcagtggttcaacacgggcctgcacttcgcctacggcatctccggccccgcc
cagggccacagcttcgtcgatccgaagaccggcgagatgatgaagtccacctcggcctac
gagcgcccgcagccccacgcctgcttcatccagagcgtggccgacgacctcgtcaacgag
ggcggcatcatggacctgtggacccgcgaggcccgcatcttcaagtacggctcgggcacg
ggcaccaacttctccaaggtgcgaggctccgaggagcccctgtccggcggcggccgcagc
tcgggcctcatgagcttcctggccgtgggcgaccgcgccgccggcgccatcaagagcggc
ggcaccacgcgccgcgcggccaagatggtctgcctcgacctcgaccaccccgacatcgag
gccttcatcgactggaaggtcgccgaggagcgcaaggtggccatgctggccgcgggcagc
gccgtcgtgcgccgccactgggacgccatctgcaggaccgtggaaggctccaccagcagg
gacgccgaccccaagaccaacgaggccctccgcaaggccctggcccgcgccaagcgcgag
ggcgtgccggccgcgttcctcacccagtgcctggggcgcctggccgagggcgacttcgcc
cgggacctggccggctacgacacctcctgggacggcgaggcctacctcaccgtgggcggc
atgaactccaacaactccgtgcgcgtgcccgacgccttcatgcgctccctggagatggac
ggcgactgggagctgaagcgccgcatcgacggcaagaccagcaagaagctccgcgccaag
gatctctgggagaaggtgaaccgcgccgcctggacctgcgccgatcccggcatccagttc
aacaccaccatcaacgactggcacacctgccccgaagacggccccatcaacgccagcaac
ccctgctccgagtacatgttcctcgacgacaccgcctgcaacctggcgtcgctgaacctg
tgcaccttcctcacggatgacggcggcttcgacctcgcgggctaccgccacgccatccgg
ctctggaccgtcgtgctcgaaatcagcgtgctcatggcgcagttccccagcgaatccatc
gccaagctcagctatgacttccgcaccctgggcctcggctacgccaacctgggcgccatg
ctcatgcgcatgggcatcccctacgacagcgtcgagggcacccagtggtgcgcggcccta
actgctctcctcaccggcgatgcctacgccgccagcgccgagatggcccacgagctcggg
cccttccccggctatcagaagaacgccgcccacatgctgcgggtcatccgcaaccaccgg
cgcgccgcctacaacgccccggcctcggagtacgagcagctctccatccggccccagggc
ctgcacggtgccggcgtgcccaagcgcatcgtcgaagccgcccgcgagagctgggacacg
gcgctgacctacggcgagcagtggggcttccgcaacgcccaggtgacggtgctggcgccc
acgggcaccatcggcctgctcatggactgcgacaccaccggcgtcgagcccgacttcgcc
ctcgtgaagttcaagaagctcgccggcggcggctacttcaagctggtgaacggcgccatc
cccgaggccctggcccgcctgggctacgcgcccacgcagatccacgagatcgagcgccat
gtggtgggctggcagcagatcaccgacgagactcccggcatcacccgcagcatgctgaag
ggcgcgggctgggccgaggaggagatcgcctccgtggagcagaagctccccacggccttc
gatcccgcctacgccatcgatgtggagcgcctgaagaacgacttcagccccgagcaggtg
gagaccttcctcctggccctcagcggcaccatgaccgtggaaggcgcgccccacctcaag
gacgagcacctgcccatcttcgactgcgccaaccgctgcggacgcacgggccgccgctac
atcgcccccgtgggccacctgaagatgatgggcgccgcccagcccttcctcagcggcgcc
atcagcaagaccatcaacctgcccgccgaagccaccgtggctgagatcggcagcatctac
gaagccagctggcagctcatgctcaaagccgtggcgctctaccgcgacggctcgaagatg
agccaggccatggccaccaacctggacctgctggatggcgtcgacaccctgctcgacgag
caggccaccggcaccgagaagaccccggccgtggcccaggccctgacgcagcagctggtg
cgcacctaccggcgccgcctgcccaaccgtcgcggcggctacacccaggccgccaccatc
gggggcaccaagctctacctccgcaccggcgaatacgaggacggcagcctcggcgagatc
ttcctcgacatccacaaggagggcgccgccttccgcgccgtgctcaactgcttcgccatc
gccgtgagcatgggcctgcagcacggcgtgccgctggaggagttctgcgatgccttcctg
ttcacccgcttcgagcccggcggcatggtggccggcagcgacaccatcaagctgagcacc
agcctcatcgacttcgtgttccgggagctggccatcagctacctgggccgctacgacctg
gcccatgtggagcccgagcagctcgtgaacgccgccaccggcctgcgtcccaacagccag
gcccccggcgcaaacctgccgaacctgcccacgggcacgcccctgcccttccccgaagcc
acgggcagcatctccacccccaccgtggcccagccgaccctccagcccgtggcccagccg
gtcaccgtcggcgcccggaccaccgtctcggcggcccaggccgcccgcgaaaagggctac
accggagacccctgccccgaatgcggccacctcaccctcgtccgcaatggcgcctgcatg
aagtgccagacctgcggcgccacgacggggtgcagctag

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