Geosporobacter ferrireducens: Gferi_02890
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Entry
Gferi_02890 CDS
T04493
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gfe
Geosporobacter ferrireducens
Pathway
gfe00470
D-Amino acid metabolism
gfe00550
Peptidoglycan biosynthesis
gfe01100
Metabolic pathways
gfe01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Gferi_02890 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Gferi_02890 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Gferi_02890 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gfe01011
]
Gferi_02890 (ddl)
Enzymes [BR:
gfe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Gferi_02890 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
gfe01011
]
Precursor biosynthesis
Amino acid ligase
Gferi_02890 (ddl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_4
GARS_A
RimK
MCR_beta_N
RepB-RCR_reg
Motif
Other DBs
NCBI-ProteinID:
AOT68635
UniProt:
A0A1D8GCJ3
LinkDB
All DBs
Position
complement(570712..571794)
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AA seq
360 aa
AA seq
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MKTNVYVIYGGRSVEHEISLKTASFILNALDKEKYNVYPVYITMKGAWFPLEKIKEEILD
VKTLQRSCTDSAAKSIGSFFMKDFRQEERSIVFPALHGTNGEDGTIQGFLELLRIPYVGN
GVLASAAGIDKVVMKDLFANADIPQVKYIPFSLNQWMNNEQDTYKEIEKIIGYPCFVKPA
RLGSSVGINRCVNREELEEAVKEAFLYDRKLVIEEEVIGREMQIAVVGNDDPIASVVGEF
IQERPFMDYNAKYLDGKLVSVIPARLPADISQKMRETSNAIFKLLNCSGLVRVDYFVTDK
NRFFVNEVNTMPGLTKLSMFPALCEKTSGMTKKQLIEKLIELGFERYEQQQSILNARWEK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaatgtctatgtaatatacggcggcaggtcggtagaacacgaaatttctcta
aaaacagcttcttttatattgaatgcattagataaagagaaatacaatgtatacccggta
tatatcacaatgaagggagcatggtttccactagaaaaaattaaagaagagatcctagat
gtaaaaacgcttcagagaagctgtacggattcagcagctaaatctatcggatcatttttc
atgaaagatttccggcaggaagagagaagtattgtatttcctgctttacatgggaccaac
ggagaggatgggacgattcaaggattcttagaactattaagaattccctatgttggcaat
ggcgtactggcgtcagcagctggtattgataaagttgtgatgaaggatttatttgctaat
gcagatattccccaggtaaagtatattcctttttcattgaatcagtggatgaataatgag
caggatacctacaaggagattgaaaaaattattggttatccttgctttgtcaaacctgca
agattaggctcaagtgtgggaattaaccgctgtgtaaatcgagaggaattggaagaggca
gtgaaggaagcatttttatacgatcgaaaactggttattgaagaagaggttattggcagg
gaaatgcaaatagcagtagtcggaaacgatgaccccatagcttctgttgtgggagagttc
attcaggaaaggccttttatggactacaatgcgaagtatttggatggtaaactggtttct
gtaataccggcaagactgccagctgatatcagtcaaaaaatgcgagaaacttccaacgca
atttttaaattattaaattgctctggtcttgtacgtgtagattattttgtaacagacaaa
aatagattttttgttaatgaagtaaatacaatgcctggattaacaaagctgagcatgttt
cccgctctatgtgagaaaaccagtggtatgacaaaaaaacagctcattgaaaaattaatt
gagttaggatttgagcggtatgagcagcagcaatctatattaaacgcgaggtgggaaaaa
tga
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