Geosporobacter ferrireducens: Gferi_15370
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Entry
Gferi_15370 CDS
T04493
Name
(GenBank) class V aminotransferase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
gfe
Geosporobacter ferrireducens
Pathway
gfe00450
Selenocompound metabolism
gfe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gfe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Gferi_15370
Enzymes [BR:
gfe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Gferi_15370
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Gferi_15370
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
SCAB-ABD
Reo_sigma1
Motif
Other DBs
NCBI-ProteinID:
AOT70813
UniProt:
A0A1D8GIR3
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All DBs
Position
complement(3276469..3277803)
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AA seq
444 aa
AA seq
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MKAVPSYRDHVVGVETPIPLMNGTIAKAINFDNAATTPPFISVIQAIVNFSPWYSSIHRG
TGCKSQFSSKLYEEAREEIAEFVRATGSSQTVIFVKNATEAINKLAYRLCDSQDHGVVLS
SCMEHHSNDLPWREKYTVDYIDIDEQGRLSLRDLAAKLEQYQGRVKLVTVTGASNVTGYR
NPIHQVAAMTHNYGAKILVDGAQLVPHTPFDMKPVSSPEHIDFLVFSAHKMYAPFGIGVL
IGPKSAFEESCPDYKGGGTVDLVTHDFVRWAPPPQKEEAGTPNLMGVMALKESIRTLSSF
GMDKIDRYETFLLYYALEKLRRIPDIELIGSHEHQNRVAIIPFNISGMPHGTTAAILSYE
GGIAVRSGCFCAQPYVQRLLKIPPEEIHERIKDPHVPHPGLVRISFGLYNTREEIDTLAA
LLQHIVLHKKAYLDKYQAISPPIH
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgttcccagctatagagatcatgttgtcggtgtagaaacacccattccttta
atgaacggaacgatcgcaaaagcaattaattttgacaatgctgccactacaccgcccttt
atctccgtcatacaggccattgtcaatttctccccctggtattcttccatacacaggggt
accggatgtaagtcgcaattttcttctaagctttatgaggaagcccgggaagagattgcg
gagtttgtccgggcaaccggctcatcacaaaccgttattttcgttaaaaatgctacggaa
gccatcaacaagcttgcctatcgcctatgcgacagtcaagatcatggagtcgttttatcc
tcctgcatggagcatcattccaatgatttgccttggcgggaaaaatatacggtagattat
attgacattgacgaacagggcagattgtctcttcgcgatttagcggctaagttggaacaa
tatcaaggtcgtgtcaagttagttaccgtgacaggggcttctaatgtaacaggctatcgc
aatcccatacatcaagtggctgctatgacccataactatggcgccaagattcttgtggac
ggtgcacagttggttccccatactccctttgatatgaagcctgtaagttctcccgaacat
attgattttttagttttctctgctcataaaatgtacgctccctttggcattggcgtcttg
attggtcctaagtccgcctttgaagaaagctgtccggattacaagggaggcggcacggtt
gatcttgtaacccatgactttgtccgttgggcaccgcctccacaaaaagaggaagcaggc
actcctaacttaatgggcgttatggccttaaaggaatccatacggaccttatccagtttt
ggaatggataagattgatcgatatgaaacttttctgctttactatgcacttgaaaagtta
cgaaggattcccgatatcgagcttatcggcagccacgaacatcagaaccgcgtagctatt
attccttttaatatttccggaatgcctcacggcaccacagcagctattctctcctatgaa
ggaggtatcgctgtacgcagcggatgtttctgcgcccagccctatgtacagcggctgtta
aagattcctcctgaagaaattcacgaacggatcaaagatcctcatgttccccatcctggt
ttggtgagaatcagctttggattatataatacccgtgaggaaatagataccttagctgct
ttattgcagcatattgtacttcataaaaaagcttatttagataaatatcaagccatctcc
cctcccattcattaa
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