Geospiza fortis (medium ground-finch): 102032289
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Entry
102032289 CDS
T03755
Symbol
NSMCE1
Name
(RefSeq) NSE1 homolog, SMC5-SMC6 complex component
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102032289 (NSMCE1)
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102032289 (NSMCE1)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102032289 (NSMCE1)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Atypical E3
102032289 (NSMCE1)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
102032289 (NSMCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
zf-RING_16
DUF4822
Motif
Other DBs
NCBI-GeneID:
102032289
NCBI-ProteinID:
XP_005426025
UniProt:
A0A6I9ZAH1
LinkDB
All DBs
Position
Un
AA seq
243 aa
AA seq
DB search
MAAHMTNAHRRFLQVLMSNRITEGSEARKLHQHCCETDKVYYAHDKLDDFISTINSHLQP
LFMQIRKGISEDDGRAHYAVVNLAETEVTKMASDYTEMELELFRKTMDLIILSENGFASS
TDILNLADQLKTKKMKKKEAEQVLKVFVEDKWLSEKNGEYTLHTRCIIEMEQYILSYYQD
LAKKCNLCHSLAIQSQVCESCGIGMHLPCARKYFRGQTEPRCPKCNEFWSCDTPGVNRMG
SQT
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcacatgaccaatgctcatcgacggttcttgcaggttcttatgtctaatagg
ataacagaaggatcagaggccagaaaattacaccagcactgctgtgaaactgataaagtt
tactatgcacacgataaactggacgatttcatcagcactattaatagccacctgcagcct
ttgtttatgcagatccggaagggaatatcagaagacgatgggagagcacattatgctgta
gtgaatttggcggaaactgaagtaactaaaatggcatctgactatacagaaatggaattg
gaattgttcagaaaaacaatggacctaataattttatcagaaaacggctttgcctcatct
acagatattttaaatttggctgaccaacttaagacaaaaaaaatgaagaaaaaggaagca
gaacaagtgctgaaagtttttgtggaggataagtggctctctgagaaaaatggagaatat
actctgcatactcgttgcataattgagatggaacagtacattctcagctactaccaggat
ctggcaaagaaatgtaacctctgtcacagcctcgccatccagagccaagtatgtgaatcc
tgtggaattggaatgcacttaccttgtgccagaaagtacttcagaggccagactgaaccc
cgctgtccaaagtgtaatgaattctggtcttgtgacactccaggtgtgaatcggatgggc
tcccagacttaa
DBGET
integrated database retrieval system
