Geospiza fortis (medium ground-finch): 102032596
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Entry
102032596 CDS
T03755
Symbol
XPC
Name
(RefSeq) XPC complex subunit, DNA damage recognition and repair factor
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102032596 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102032596 (XPC)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
102032596 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
102032596
NCBI-ProteinID:
XP_005420265
LinkDB
All DBs
Position
Un
AA seq
935 aa
AA seq
DB search
MDDFEEKKPSIKKTSKAPARKKGQDCDTEVSNSAKTSKPSKQEKAKSQIKESKKNARNKE
NCIKEETCSDSLKHPQNEMKLKTESPLKKEMDEGNIDNDDDDDDDDDEEMEDEWEDVEEL
QEPATDKLEEAAVLPSVGLPSNPVEIEIETPEQVKKRERREKRKAEFEMYLRRMMKRFSK
EVREDTHKVHLLCLLANGFYRNRICSQPDLLAIALSIVPTRFTQVPAGQVGLVYLSNLVK
WFVGTFTVNDELSTEKGESLQSTLERRFAIYAAQDDEELVHIFLIILRALQLLCRLVLSF
QPIPLKETRPKGKSSSKRLSHSSTSEGQETSATTPKAVAKTCPCKKAKQDEKSSESKENS
KEPKKPKTAQTERTHKSKLTKGSQEQKESNNETSSAEKDVPVRPKNDRRRRVASKVCYKE
ESGSDEGSASDFELSEEESDVSDEDFETVPKRRRSSQASQNSKLTTVKRSKTETSETRQS
ENSYGAETKPAKSTTPALPQGKKKRNKIISSDEDEGQQEVRKAMGTDQWLEVFLEPEDKW
VCVDCVHGNVGQPQLCFAHATKPLFYVVGFDNDGSVRDVTQRYDPVWMTSTRKSRVDPEW
WEETLQPYESPCVERDKKEENEFQVKLQDQPLPSAIGEYKNHPLYALKRHLLKYQAIYPE
TAAILGYCRGEAVYSRDCIHTLHSRDTWLKQARVVRIGEVPYKMVKGFSNRARKARLAEP
ANRDREDLALFGRWQTEEYQPPIAVDGKVPRNEYGNVYLFLPSMLPVGCVQLKLPNLNRV
ARKLNIDCAQAITGFDFHGGYSHPVTDGYVVCEEYKEVLVAAWENEQAEIEKKEKEKREK
RALGNWKLLTKGLLIRERLKQRYSIKTEPSARETEKGGGFSSDEEGAPSSESTVGNTAMY
WPQNRQLEKQEEIKTKKSKREKRGEAAQLFPFEKL
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggatgattttgaagaaaaaaagcccagtataaaaaagacctcaaaagctccagctagg
aaaaagggacaagattgtgatactgaagtttccaattcagcaaaaacttccaagccttca
aaacaagaaaaggcaaaatcacaaataaaagaaagtaaaaagaatgctagaaataaagag
aattgtatcaaagaggaaacatgcagtgactcactgaagcatcctcagaacgagatgaag
ttaaagacagaatctcctcttaaaaaagagatggatgaaggcaatattgacaacgatgat
gatgatgatgatgatgatgacgaggaaatggaagatgagtgggaggacgtggaagaactt
caggaacctgctacagataagttagaagaagctgctgttcttccatcagtggggctgcca
agcaatcctgttgagatagagattgaaaccccagagcaagtgaagaaaagagagaggaga
gaaaaaagaaaagccgagtttgagatgtaccttcggagaatgatgaaacgtttcagcaag
gaggttcgtgaggacacacacaaggttcacttgctgtgtttattagcaaatggtttctac
aggaacaggatctgcagccagccagatctcctcgccatcgctctgtccatcgtccccacg
cgcttcacccaggtgcctgcaggccaagtgggccttgtctacctttccaacctggtgaaa
tggtttgttggaaccttcactgtcaatgatgaactttccactgaaaaaggagagtccctt
cagtcaacactggagaggaggtttgccatctatgctgcacaggatgatgaagagcttgtt
catatatttttaattattctgcgagctttacagctgctgtgtcgcctcgtgctgtctttt
cagcctattcctctcaaggagacaagaccaaagggaaagagctcatccaagaggctgtct
cacagcagcacctctgagggacaggagacttctgccacaacacccaaagctgtggcaaaa
acatgcccctgcaaaaaagccaagcaggatgagaaatcctcagagagcaaagaaaacagc
aaggagccaaagaaacctaaaactgcccagactgaaaggacacacaagtcgaagctgact
aaaggtagccaggaacagaaggaatcaaacaatgagaccagttcagcagaaaaagatgtg
ccagtcaggcccaagaacgaccgccggagacgagtggcctccaaagtgtgttacaaggaa
gagagtggaagtgatgagggcagtgcttcagactttgagctttcagaggaggagagtgat
gtctctgatgaggattttgaaactgtccctaagaggcggaggagctcacaggcctcccag
aattcaaagctgacaactgtgaaaaggtcaaaaactgagacttcagaaacaaggcagtca
gaaaattcatatggagctgagactaagccagcaaaaagtacaactccagccttgcctcaa
ggaaagaagaagagaaacaaaatcatttctagtgatgaggatgaaggacagcaggaggtg
aggaaagccatgggcacagaccagtggctagaggttttccttgagcctgaggacaagtgg
gtttgtgtagactgtgttcatggcaatgtgggccagccccagctgtgctttgcacatgcc
acaaagccacttttctacgttgtgggatttgacaacgatgggagtgtcagggatgtgaca
caaagatatgatccagtgtggatgacctcaacaaggaagagccgtgtggacccggagtgg
tgggaagagacactgcagccctatgaaagtccctgtgtggagagagacaagaaggaagaa
aatgagtttcaagtgaagcttcaagatcaacctctaccatcagcaattggagagtacaaa
aaccaccctctctatgcactgaagaggcacctcttgaaataccaggccatctatcctgag
acagctgctatcttggggtactgcaggggagaggctgtctactccagagactgcatacac
acgctgcactccagggacacttggctgaagcaagctcgagtggtgaggattggagaagtg
ccttacaagatggtaaaaggattttccaaccgggcgaggaaggcgcgcctggcagagccg
gcgaaccgggaccgggaggacctggcactgtttggccgctggcagacagaggagtatcag
cctcccattgcagtggatggaaaggttcctcggaatgaatatggaaatgtctatctcttc
ttgccatccatgttacctgtgggctgtgtgcagctgaaactgccaaacctgaacagagtg
gcacggaagttgaacattgactgtgctcaagccatcactggatttgattttcatggaggc
tactcacacccagttactgatggctatgtggtgtgtgaggagtataaagaggtccttgtt
gctgcctgggaaaatgaacaagcagaaatagaaaagaaggagaaggagaaacgtgagaaa
agagctctagggaattggaagctgctgacaaaaggccttctcatcagagagagactgaag
caacgctactccatcaagactgagccatcagcacgtgagacagagaaaggaggaggattc
tcttctgatgaagaaggagctccgagctcagagagcacagtggggaacacagccatgtat
tggccccagaaccgccagctagagaaacaagaagagataaaaaccaaaaagagcaagaga
gaaaagagaggagaagcagctcagttgttcccttttgagaaattgtga
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