Geospiza fortis (medium ground-finch): 102034228
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Entry
102034228 CDS
T03755
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide gated channel beta 1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
102034228 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gfr04040
]
102034228 (CNGB1)
Ion channels [BR:
gfr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102034228 (CNGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Presenilin
Motif
Other DBs
NCBI-GeneID:
102034228
NCBI-ProteinID:
XP_014163231
LinkDB
All DBs
Position
Un
AA seq
1072 aa
AA seq
DB search
MGWIDRVVPQPPVPHVAEETPVQPAKAPTGKAAGPTEAAERARTEEKKVTFVASEDSSSV
FDSVGSSVLSWLSHGLEKVIPQPAPAPGLQALGKSFETSIDIADETEVQVIGDEDDDGLE
ITPFDAEEDVSEGEPESAPEQWAGQRVLSWLSQGFERILPQPEGMKKPETELKEKSEGTV
EVHAAPGEQEETHLILEEMEDGQMNEEIRAWAHEAELQADAHSLPTIQEEPQEEESSFGE
GRQCRAMGAMLSEPCRGQERKKEEEERKKEEEEERKKEEEERKKEEEERKKEEEEERKKE
EEERKKEEEERKKEEEEERKKEEEERKKEEEERKKEEEEERKKEEVEEEPAEAAETDAEG
HPPTVEIKDVDSPERAVEIHGTYGELPAAGAPNLLAVPGAASPSLPERIGSASSLSSAII
NTRLQELVRLFKERTEKVKEKLIDSDVTSDDESPVASPSKPAPAAAAVPAPGGQLEGDKP
LGDDHYCEMLCCTFKRRPWLERLKSYQFPSSIDPLTNLMYVLWLFFVVMAWNWNCWLIPV
RWAFPYQTPANIHYWLLVDYLCDLIYLLDILIFQTRLQFVQGGDIITDKKAMKENYLRSQ
RFKMDVLCLLPLDFFYFKVGVNPLLRFPRCLKYMAFFEFNNRLEAILTKAYIYRVIRTTA
YLLYSLHVNSCLYYWASAYEGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTLF
EIVFQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYRIPRAVQNR
VKTWYEYTWHSQGMLDESELLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDMLK
RLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEISLLAA
GGGNRRTANVVAHGFANLFILEKKDLNEILVHYPESQKLLRKKAKKMLRSNNKPKDEKGG
PGDALVIPPKAETPKLFRAALAATGRMGGKGPLGRLRWRLKELQELQGSSVSPTPPKSPV
HQRSPVTSRRAQTCLGEEISSESPDHSVTIRVISTAKEDEEILAAEISEKDE
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgggctggattgaccgggtggtgccccagcccccggtgccccacgtggcagaggagacc
cctgtgcagccagccaaggcaccgacaggaaaggctgctggccccacagaggctgctgag
cgggcacgcactgaggaaaagaaagtgacctttgtggcttctgaggactcgagttctgtg
tttgacagtgtggggagcagtgtgctctcctggctctcccatgggctggagaaggtcatt
ccccagccagccccagccccagggctgcaggcgctcgggaagagcttcgagacaagcatc
gacattgctgatgagacagaggtccaggtcattggggacgaggatgacgatggtctggag
ataactcccttcgatgccgaggaggacgtgtccgagggggagccggagagcgccccggag
cagtgggcaggacaacgggtgctcagctggctctcacagggcttcgagaggattctgccg
cagccagaggggatgaaaaagccggagacagagctgaaggagaagagcgaaggcacggtg
gaagttcatgcagcccctggggagcaggaggaaacccatctcatcctggaagagatggag
gatggccagatgaatgaagagataagagcctgggctcacgaggctgagctgcaggcagat
gctcattcccttcccaccatacaggaggagcctcaggaagaagaatccagttttggtgag
ggcaggcagtgcagggccatgggagcaatgctctcagagccctgcagaggacaggagagg
aagaaagaggaagaggaaaggaagaaagaagaagaggaggagaggaaaaaagaggaagag
gagaggaagaaagaggaagaggaaaggaagaaagaagaagaggaggagaggaaaaaagag
gaagaggagaggaagaaagaggaagaggaaaggaagaaagaagaagaggaggagaggaaa
aaagaggaagaggagaggaagaaagaggaagaggaaaggaagaaagaagaagaggaggag
aggaaaaaagaggaagtggaagaggagccagctgaagctgctgaaacagatgctgaaggt
catccccccaccgtggagatcaaggatgtggacagcccagagcgtgctgtggagatccac
ggcacctatggagagctgcctgctgccggcgctcccaacctgctggccgtgcccggcgct
gcatcccccagcctccccgagcgcatcggctcggcctcgagcctgagcagtgccatcatc
aacacccggctccaggagctggtgaggctcttcaaagagaggactgagaaggtgaaggag
aagctgattgactctgatgtcacctcagatgatgagagccccgtggcatctcccagcaag
ccagcacctgcagcagcagcagtgcctgccccaggagggcagctggagggggacaaaccc
ttgggggatgaccactactgtgagatgctgtgctgcacgttcaagcgccggccctggctg
gagcgcctgaagagttaccagttccccagcagcattgaccccctgaccaatctgatgtac
gtgctgtggctgttcttcgtggtcatggcctggaactggaactgctggctgatccctgtc
cgctgggccttcccctaccagaccccagccaacatccactactggctgctggtggattac
ctctgtgacctcatttacctgctggacatcctcatcttccagacccggctgcagtttgtg
caggggggagacatcattactgacaaaaaggccatgaaagagaactacctgcggtcgcag
cgcttcaagatggacgtgctgtgcctgctgcccctggatttcttctacttcaaagtgggt
gtgaaccccctgctgcgcttccctcgctgtctgaagtacatggccttcttcgagttcaac
aaccgcctggaggccatcctgaccaaggcatacatctacagagtgattcgcaccactgcc
tacttgctgtacagcctgcatgtgaactcctgcctctactactgggcctcagcctacgaa
ggactgggctccaccacctgggtctatgatggggaaggaaacagctacatccgctgttac
tactgggcagtgaaaaccctcatcaccatcgggggcctgccagaccccaagaccctgttt
gagatcgtcttccagctgctgaactacttcacaggggtctttgctttctctgtcatgata
gggcagatgagagacgtggttggtgctgctactgcaggacaaacgtactatcggagctgc
atggacagcaccattaaatacatgaacttctacaggatccccagagcagtgcagaacagg
gtgaagacctggtacgagtacacatggcactcccaaggcatgctagatgagtcagagctg
ctggtgcagctgccagacaagatgaggctggacatcgccatcgacgtgaactacaacatc
gtgagcaaagtggcccttttccagggctgtgacagacagatgatctttgacatgctgaag
cggctcagatcagtggtgtacctgcccaacgactacgtgtgcaagaagggggagataggc
cgggagatgtacatcatccaggcgggacaggtgcaggtgctggggggacccgacggcaaa
tccgtgctggtgactctgaaagctggatctgtctttggggaaatcagcctgctggcagca
ggagggggaaatcgccgcacagcaaacgtcgtggcccacggcttcgccaacctttttatt
ttggagaagaaagacttgaacgagattttggtgcattacccggagtctcagaagctgctg
cgcaagaaagccaagaaaatgctgagaagcaacaacaaacccaaagatgagaagggaggc
cccggagatgcgctggtcatccccccgaaagctgagaccccaaagctgttcagggctgcc
ctggcggccacggggaggatggggggcaaggggcccctggggcggctccgctggaggctg
aaggagctgcaggagctgcagggttccagcgtcagcccaaccccaccgaaatcaccagtg
caccagagatctcctgtcacatcccgcagagcacaaacctgcctgggagaagaaatatcc
tcagaatctcctgatcattccgtcaccattcgtgtgatttccacagcaaaagaagatgag
gaaatccttgctgctgagatttcagagaaagatgaa
DBGET
integrated database retrieval system
