Geospiza fortis (medium ground-finch): 102036040
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Entry
102036040 CDS
T03755
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha 1, catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102036040 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfr03032
]
102036040 (POLA1)
Enzymes [BR:
gfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102036040 (POLA1)
DNA replication proteins [BR:
gfr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
102036040 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
102036040
NCBI-ProteinID:
XP_005424954
LinkDB
All DBs
Position
Un
AA seq
1479 aa
AA seq
DB search
MSESGSFAASRSRRERKNRRGQQEALERLKKAKAGEKLKYEVEEFTGVYDEIDEDEYSKM
VRDRQDDDWIVDDDGIGYVEDGREIFDEDLDDDALISNKKGKGGKTSTIDKKNVKKSVVS
KPNTIKSMFMASAGKKNTDKTVDLSKDDLLGDILQDISAETVQLSPPPVIVLKRKRSAGV
PLSPFSVQSQTPKVITPISKKAPAHVRKETPPPASFHPKHPNNTAKSVRVSENEDTKHVQ
KPIENEGIVKAVGEKATKDDDQGMMDFDEEDFDEPMEAEHVETIPETAESLKRDNEIEKK
ETEQLESEKKETSVLSCSLPGLSCWDRIDEDEADLVAAEVQLDPNLLPLVNGESDDQVFR
FYWLDAYEDQFSQPGVVFLFGKVWIESANTYVSCCVTVKNIERTVYLLPRETEIDLSTGK
ETETPVTIMSVFKEFNDTISPKYKIMKFKSKKVEKYYAFEIPDVPAKSEYLEVKYSAECP
RLPQDLKGQTFSHVFGTNTSSLELLLMNQKIKGPCWLEIKNPQPSNQPVSWCKVEAVAMK
PGLVNVVKELSPPPPLVVMSFSMKTIQNPKTHQNEVVALAALVHQKFPLDKAPPQPPFQT
HFCAVSKPSDCIFPYDFKEAIKKKNAKIEIAATERTLLGFFLAKIHKIDPDVVVGHNIYG
FDLEVLLQRINLCKVPHWSKIGRLRRSNMPKLGGRGGFAERNAACGRMICDVEISAKELI
RCKSYHLSELVHQILKTEKVTILPEEIPNMYSDSPRLLFMLENTWTDARFILQIMCELNV
LPLALQITNISGNVMSRTMMGGRSERNEFLLLHAFHEKDYIVPDKQVFKKPPPKPVDEDE
DFEDQNKSKIGKKKAAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRL
SSEAQKRAEVEEEEEIPELPDPSLEMGILPKEIRKLVERRRQVKQLMKQPDLNPDLYLQY
DIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNLEVIYGD
TDSIMINTNSTSLDEVFKLGNKIKNEVNKLYKLLEIDIDGIFKSLLLLKKKKYAALSVEP
TGDGKYVTKQELKGLDIVRRDWCDLAKQTGNYVIGQILSDQPRDIIVENIQRRLIEIGEN
VVSGQIPANQFEINKALTKDPQDYPDKKALPHVHVAMWINSHGGRKVKAGDTVSYIICQD
GSDLSASQRAYAPEQLKKQENLKIDYQYYLSQQIHPVVARICMPIEGIDSVLIATWLGLD
PSQFRVHHHYHKDENDALVGGPAQLTDEEKYRDCERFKFCCLKCGTENIYDNVFDGSGRF
IEPSLQRCSKTECEEPPFNYVVQMSNKLLLDIRRHLRKYYSGWLICEEPTCQNRTRRLPL
SFSRSGPVCQACRKAVLRPEYSDKALYTQLCFYRYIFDVDYAMDKVVTEEEKEYLKKKQL
RGEVSEAYKRLKSTVDKCLAMSGYSEVNLGKLFTVSIGR
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtctggaagttttgcagcatcacgttctagacgtgagaggaagaatagaaga
ggccagcaagaagcacttgaacgtctgaaaaaagccaaagctggggaaaaattaaaatat
gaggttgaggagttcacgggtgtttatgatgaaatagatgaggatgaatactccaagatg
gtcagagaccgtcaggatgatgactggattgttgatgatgatgggataggttatgtagaa
gatggaagggaaatctttgatgaagatctggatgatgatgctcttatttccaataagaaa
ggaaaaggtggcaaaacatctacaattgataaaaagaatgtgaaaaaatctgtggtgtca
aagccaaacacaattaagtctatgtttatggccagtgctgggaagaaaaacacagataaa
actgtggacctgtccaaggatgatttacttggggatattcttcaagatattagtgctgaa
acagttcagctaagtccaccaccagttatagtgctgaaaaggaagagatctgctggagta
ccactcagtcctttctctgtacagtcccaaactcctaaggtaatcacccctatatcaaag
aaagctcctgctcatgtcagaaaggagactcctcctccagcttcatttcatcctaaacac
cccaataatacagcaaaatctgtccgagtctctgaaaatgaggacaccaagcatgtgcaa
aaacctatagaaaatgaaggaatagtgaaggcagtaggagagaaagctactaaagatgat
gatcagggaatgatggattttgatgaggaggactttgatgaacctatggaagcagagcat
gtggaaactatacctgagacagctgaaagcttgaaaagagacaatgaaattgagaagaaa
gagacagagcagctggaatcagagaagaaagagacatctgtcttaagttgttctctccca
ggtctctcatgttgggacagaattgatgaggatgaagctgatctagtagcagcagaagtt
caactggaccccaatctccttccacttgtgaatggggaaagtgatgatcaagtcttcaga
ttttattggctggatgcttatgaagatcagttcagtcagccaggtgtggtatttttgttt
ggcaaagtttggattgaatctgcaaacacctatgtcagctgttgtgtgacagtgaaaaat
attgagagaactgtttatctgctgccacgtgaaacagaaatcgacctatctactggtaaa
gagacagagactccagtaactataatgagtgttttcaaggaatttaatgacaccatttca
ccaaagtacaagatcatgaagttcaaatccaagaaagtggaaaaatactacgcttttgag
attccagacgtaccagcaaaatctgaatacctagaagttaaatattcagctgaatgccct
cggcttccccaagacctgaagggacaaacattctcacatgtctttggaaccaacacctct
agcctggaactcctcttgatgaatcagaagatcaaaggaccctgctggctggaaataaaa
aatccacagccttcaaatcagccagtcagctggtgtaaagtggaggctgtggccatgaag
cctggcttggtgaatgtggttaaagagctttctcctcctcctcctctggtggtcatgtcc
ttcagcatgaagaccattcagaacccaaagactcaccagaatgaggttgtggctcttgca
gctctggttcatcagaaatttcctttggataaggctccacctcagcctccttttcaaaca
cacttctgtgctgtttccaagccgagtgattgcatttttccttacgacttcaaagaagcc
attaaaaagaagaatgctaaaatagagattgctgcaacagagagaacactgctgggattt
ttcctcgcgaagattcacaaaattgacccagacgttgttgtgggtcataatatttatgga
tttgatctggaagtgctgcttcaaagaattaatttgtgcaaagtccctcactggtccaag
ataggtcgactgaggaggtctaatatgccaaagcttgggggccgaggagggtttgctgaa
aggaatgctgcctgcggtcgaatgatctgtgatgtggaaatttctgctaaagaactaatt
cgttgcaaaagttaccatttgtctgaactggtccatcagattttgaaaacagagaaggta
acaattctaccagaggagattccaaatatgtacagtgactctcctcgcttactgttcatg
ctggaaaacacctggacagatgccaggttcattctccagatcatgtgtgagctgaatgtt
ctgccactggctcttcagataacaaacatctctgggaatgtcatgtcgaggacaatgatg
ggtggacgatctgaacgtaacgagttcctgctgcttcatgcctttcacgagaaggattac
attgtgccagacaaacaagttttcaaaaagcctccaccaaagccggtggatgaagatgaa
gattttgaagatcagaataaatcaaagatagggaaaaagaaagcagcatatgctgggggc
ttagtcttggaacccaaagtcggtttttatgacaagtttattttgcttctcgacttcaac
agcttgtacccatcgattattcaggagttcaacatctgcttcaccacagtgcagagactg
tcatcagaagcacagaaaagggcagaggtcgaagaagaggaagaaattccagagcttcca
gacccatctctggaaatgggaattttgcctaaagaaatcaggaaactggtggagagaaga
cgccaagttaagcagttaatgaaacagccagatttaaatcctgacctctatttacagtat
gatatcagacagaaagctttgaaactcactgctaacagcatgtatggctgcctgggattt
tcctacagcagattctatgccaagcctttggctgctttggtgacacataaagggagagag
attttgatgcataccaaggagatggtgcagaagatgaaccttgaagtgatttatggagac
acagattccattatgataaacactaatagcaccagtttggatgaggtcttcaagctgggg
aataagatcaaaaatgaagtgaacaagctgtacaaattgttggaaattgatattgatgga
atttttaagtccttgctattgttaaagaagaagaagtatgctgctctgagtgtggaacca
acaggagatgggaaatatgtaactaaacaagagctgaaagggctggatatagtccggagg
gactggtgtgatcttgctaaacagactggcaactatgtaattggtcagattctttctgat
cagccccgagacataattgtggaaaatattcaaaggcgacttatagaaattggagaaaat
gtggtcagtgggcagatccctgcaaatcagtttgaaataaacaaggcattgacaaaagat
ccccaggattatcctgacaaaaaagccttaccacatgtgcatgtggccatgtggataaac
tcgcatggaggccgaaaggtgaaggcaggagacacagtgtcatatatcatttgtcaggat
ggatcagatctcagtgccagccagcgagcatatgctccagaacagttaaaaaagcaagaa
aatcttaaaattgattatcagtactacctgtcacagcaaatacatccagtagttgctaga
atatgtatgcccatagagggaattgactctgttcttattgcaacgtggttaggactggat
ccctcccaattcagagtccatcaccattaccataaagatgagaatgatgccttggttggt
ggcccagctcagctcactgatgaggagaaatatagggattgtgaaagattcaagttttgc
tgcctcaaatgcggaacagaaaatatttatgacaatgtctttgatggttcggggcggttt
attgaacccagcttgcaaaggtgcagcaagacagaatgtgaggagcctcctttcaactat
gtggttcaaatgagcaacaagttactgctggatattagacgccacctcagaaaatactac
agtggttggttaatatgcgaggagccaacttgccagaatcgaacgcgtcggcttccgctg
agtttctcccggagtggccccgtgtgccaggcctgcaggaaggctgttctgagaccagag
tattctgacaaggccctgtacactcagctctgcttctaccgatacatttttgatgtggac
tatgcgatggataaagtggttactgaggaagagaaagagtatttgaagaagaagcaactc
aggggggaagtctctgaggcctacaaaagactgaagagcaccgtagacaaatgcctggcc
atgagtggctactcagaagtgaaccttggcaaactcttcaccgtcagtataggaagataa
DBGET
integrated database retrieval system
