Geospiza fortis (medium ground-finch): 102036209
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Entry
102036209 CDS
T03755
Symbol
FEN1
Name
(RefSeq) flap structure-specific endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03030
DNA replication
gfr03410
Base excision repair
gfr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102036209 (FEN1)
03410 Base excision repair
102036209 (FEN1)
03450 Non-homologous end-joining
102036209 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfr03032
]
102036209 (FEN1)
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102036209 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfr04147
]
102036209 (FEN1)
DNA replication proteins [BR:
gfr03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
102036209 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
102036209 (FEN1)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
102036209 (FEN1)
Exosome [BR:
gfr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102036209 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
5_3_exonuc_N
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
102036209
NCBI-ProteinID:
XP_005426554
LinkDB
All DBs
Position
Un
AA seq
407 aa
AA seq
DB search
MVCRGSAALLASPSLGFPFPRMGIHGLAKLIADVAPGAIRENDIKSYFGRKVAIDASMSI
YQFLIAVRQGADVLQNEDGETTSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAK
RTERRAEAEKHLQEAQEAGEEENIEKYSKRLVKVTPQHTQECKKLLTLMGIPYVEAPGEA
EASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASETKKLPIQEFHLNRILQDLQLT
WEQFVDLCILLGCDYCESIRGIGPKRAVELIREHKSIERIVQQIDTKKYPLPENWLHREA
QKLFLEPDVIDPEAVELKWSEPDEEQLVQFMCGEKQFNEERVRNGVKRLSKSRQGSTQGR
LDDFFKVTGSITSAKRKEPEPKGGAKKKAKTNSKPNGTPATKTKKAK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggtttgcaggggaagcgctgccctcttggcttccccctccttgggttttcccttcccc
aggatgggaatccatggcttggccaagcttatcgccgacgtggctcccggggccatccgg
gagaacgacatcaagtcctacttcggccggaaagtggccatcgacgcctccatgagcatc
taccagttcctgatcgccgtgcggcagggagccgatgtgctccagaacgaggacggggag
accaccagccacctgatgggaatgttctaccgcaccatccgcatggtggagaacggcatc
aagccggtgtacgtgttcgacgggaagcccccgcagctgaaatccggggagctggccaag
cgcacggagcgccgggcagaggcagagaagcacctgcaggaagcgcaggaggccggggag
gaggagaacatcgagaagtacagcaagaggctggtcaaggtgacgccgcagcacacgcag
gagtgcaagaagctgctgacgctgatgggaattccctacgtggaggcacccggcgaggca
gaggccagctgtgccgccctggtgaaggccgggaaggtgtatgccgccgccacagaggac
atggattgcctcaccttcggcagccccgtgctgatgcggcacctcacggccagcgagacc
aagaagctgcccatccaggagttccacctgaaccggatcctgcaggatctgcagctgacc
tgggagcagtttgtggacctgtgcatcctgctgggctgcgactactgcgaaagcatccgc
ggcattgggccgaagcgcgccgtggagctcatccgggagcacaaatccatcgagaggatt
gtgcagcagattgacaccaagaagtaccccctgcccgagaactggctgcacagggaggcc
cagaagctcttcctggagcccgacgtgatcgatcccgaggccgtggagctgaagtggagc
gagccggacgaggagcagctggtgcagttcatgtgtggggagaagcagttcaacgaggag
cgcgtccgcaacggcgtcaagaggctgagcaagagccgccagggaagcacccagggccgg
ctcgacgacttcttcaaggtcaccgggtccatcacctcggccaagcgcaaggagccggag
cccaagggaggggccaagaagaaagccaagaccaactccaagcccaacggcaccccggcc
acaaagactaaaaaggcaaaataa
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integrated database retrieval system
