Geospiza fortis (medium ground-finch): 102038902
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Entry
102038902 CDS
T03755
Symbol
GTF2B
Name
(RefSeq) general transcription factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102038902 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102038902 (GTF2B)
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
102038902 (GTF2B)
Prokaryotic type
Archaeal type
TFB
102038902 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_N
Cyclin_C
RB_B
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
102038902
NCBI-ProteinID:
XP_014162936
UniProt:
A0A6I9Z616
LinkDB
All DBs
Position
Un
AA seq
323 aa
AA seq
DB search
MGLYTRAMHFPWVLDVLPRVTCPNHPDSILVEDYRAGDMICSECGLVVGDRVIDVGSEWR
TFSNDKATKDPSRVGDTQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRA
MMNAFKEITNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGV
PRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAAT
HIARKAVELDLVPGRSPISVAAAAIYMASQASSEKRTQKEIGDIAGVADVTIRQSYRLIY
PRAPDLFPADFKFDTPVDKLPQL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggcctttacacacgtgccatgcattttccttgggttttggatgtgcttccgagggtg
acttgcccaaatcatccagattccattttagtggaggattacagagctggtgatatgatt
tgttctgagtgtgggctagtagtaggtgaccgggtcatagacgtgggctcggagtggaga
acattcagcaatgacaaagcaaccaaagacccatctcgagtgggggacacacagaatcct
ttgctcagtgatggcgacttgagtacaatgattggcaagggcacaggtgcagcaagtttt
gatgaatttgggaattcaaagtaccaaaatcgcagaactatgagcagctctgatcgtgcg
atgatgaatgcttttaaagaaattacgaacatggcagacagaatcaacctccctagaaat
atagttgatcgaacaaataatttattcaagcaagtgtatgagcaaaagagcctgaagggg
agaagtaatgatgctattgcttctgcttgtctctacatagcctgtaggcaagagggcgtt
ccaagaacatttaaagaaatatgtgcagtgtccaggatttcaaagaaagaaataggccga
tgttttaaacttattttgaaagctctggaaaccagcgttgatttgattacaactggagac
ttcatgtcacgattctgttctaatctgggtcttcccaaacaagtacaaatggcagcaaca
catattgcccggaaagctgtggaattagatttggttcctgggagaagccctatctctgta
gcagctgcagctatttacatggcatcacaggcttcttcagagaaaaggacgcaaaaagaa
attggtgatattgctggtgtggctgatgttacgattagacagtcatacaggctgatctac
cctcgagctccagatcttttcccagcagacttcaagtttgataccccagtagacaaacta
ccacagctgtga
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