Geospiza fortis (medium ground-finch): 102039987
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Entry
102039987 CDS
T03755
Symbol
ITGB1
Name
(RefSeq) integrin subunit beta 1
KO
K05719
integrin beta 1
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03271
Virion - Rotavirus
gfr04145
Phagosome
gfr04510
Focal adhesion
gfr04512
ECM-receptor interaction
gfr04514
Cell adhesion molecules
gfr04530
Tight junction
gfr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
102039987 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102039987 (ITGB1)
04514 Cell adhesion molecules
102039987 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102039987 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102039987 (ITGB1)
04530 Tight junction
102039987 (ITGB1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102039987 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gfr04131
]
102039987 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gfr04147
]
102039987 (ITGB1)
04515 Cell adhesion molecules [BR:
gfr04515
]
102039987 (ITGB1)
04090 CD molecules [BR:
gfr04090
]
102039987 (ITGB1)
Membrane trafficking [BR:
gfr04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
102039987 (ITGB1)
Exosome [BR:
gfr04147
]
Exosomal proteins
Proteins found in most exosomes
102039987 (ITGB1)
Cell adhesion molecules [BR:
gfr04515
]
Integrins
Integrin beta subunits
102039987 (ITGB1)
CD molecules [BR:
gfr04090
]
Proteins
102039987 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
102039987
NCBI-ProteinID:
XP_014163640
UniProt:
A0A6I9ZAU0
LinkDB
All DBs
Position
Un
AA seq
723 aa
AA seq
DB search
MEDIENPRGSKQVLENREVTNRKKGAAEKLKPEAITQIQPQKLSLHLRVGEPQTISLKFK
RAEDYPIDLYYLMDLSYSMKDDLENVKSLGTALMLEMEKITSDFRIGFGSFVEKTVMPYI
STTPAKLRNPCTGDQNCTSPFSYKNVLSLTSEGNKFNELVGKQHISGNLDSPEGGFDAIM
QVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHLENNVYTMSHYYDY
PSIAHLVQKLSENNIQTIFAVTEEFQAVYKELKNLIPKSAVGTLSSNSSNVIQLIIDAYN
SLSSEVILENTKLPKGVTISYKSFCKNGVNDTQEDGRKCSNISIGDEVRFEINITANECP
KKEQNETIKIKPLGFTEEVEINLQFICECQCQSEGEPNSPACHAGNGTFECGACRCNEGR
IGRLCECSTDEVNSEDMDAYCRRENSTEICSNNGECICGQCVCKKRENTNEVYSGKYCEC
DNFNCDRSNGLICGGNGICKCRVCECFPNFTGSACDCSLDTTPCMASNGQICNGRGTCEC
GTCNCTDPKFQGPTCEMCQTCLGVCAEHKDCVQCRAFDKGEKKETCSQECMHFNMTRVES
RDKLPQPGQPDPLSHCKEKDVDDCWFYFTYSVNSNGEANVHVVETPECPSGPDIIPIVAG
VVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKY
EGK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatagagaatcccagaggcagcaaacaggtgctcgaaaatagagaagtaaca
aatcgtaagaaaggggctgcagagaagctgaaaccagaagccattacacagatccagcca
cagaaattatcactgcatctaagagttggggaaccccagacaatttcattaaaattcaag
agagctgaagactaccccattgacctttattatcttatggacctctcctattctatgaaa
gatgatttagagaatgtgaaaagtctcggaacagctctgatgttagagatggaaaaaata
acttcagactttcggattggctttggctcttttgtggagaaaactgtgatgccttatatc
agtacaacaccagccaaactcagaaatccttgtacaggggaccagaactgtacaagtcca
tttagctataaaaatgtgcttagccttaccagtgaaggaaacaagttcaatgaacttgta
ggtaaacagcacatttctgggaacttagattctcctgaaggtggatttgatgcaataatg
caggttgcagtttgtggggaacaaattggctggaggaatgttacaagactattagtgttt
tccacggatgctggattccactttgcaggagatggtaaacttggtggaattgttctgcca
aatgatgggaaatgtcatctggaaaataatgtgtacacaatgagccactattacgattat
ccgtctattgctcatctggtacagaaacttagtgagaacaatattcagacaatctttgct
gttactgaagagtttcaggcagtctataaggaactgaaaaatctgataccaaaatcagca
gtgggaacattgtcttcaaattccagtaatgtgattcagctgatcattgatgcatacaat
tccctttcttcagaggttatcctggaaaatactaagctaccaaaaggagtgacaatcagt
tacaagtctttctgcaagaatggagtgaatgacacacaagaagatggaaggaagtgttct
aacatttctattggagatgaggttagatttgagattaatataacagctaatgaatgtcca
aagaaagaacaaaatgaaacaattaaaattaaaccactgggattcactgaagaagttgaa
attaatctccagttcatctgtgagtgtcagtgtcagagtgaaggagagcctaatagtcca
gcctgccatgcaggaaatggaacatttgaatgtggtgcctgcagatgtaatgaaggacga
attggaagactatgtgaatgtagcacagatgaagtaaatagtgaggatatggatgcttac
tgcaggagggagaacagcacagaaatctgcagtaacaatggagaatgcatttgtggacaa
tgtgtgtgcaagaagagggagaacaccaatgaggtgtattctggcaaatactgtgaatgt
gacaacttcaactgtgatcgatcaaatggtttaatctgtggaggaaacgggatctgcaag
tgcagagtgtgcgagtgtttccccaacttcactggcagcgcctgcgattgttccttggat
actacaccgtgtatggcatcgaatgggcagatttgcaatggaagaggaacctgtgaatgt
ggcacctgtaactgtacagatcccaaattccaaggccccacctgtgaaatgtgtcagact
tgcctcggtgtctgtgcagaacacaaggactgtgttcagtgcagagctttcgataagggg
gagaagaaggagacgtgttcccaggagtgcatgcacttcaacatgacgcgcgtggagagc
cgcgacaagctgccgcagcccggccagcccgacccactgtcccactgcaaagagaaggac
gtggatgactgctggttctacttcacttactctgtcaactccaatggtgaagccaatgtc
cacgtggtggagaccccagagtgccccagcggtcctgacatcattcccattgtagccggt
gtggttgctggaattgttcttattggacttgcattattattgatttggaaactactaatg
atcattcatgacagaagagaatttgctaaatttgaaaaagagaagatgaatgccaagtgg
gatacgggtgaaaatcctatttacaagagtgcagtgacgactgtggtcaatcctaaatat
gagggaaaatga
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integrated database retrieval system