KEGG   Geospiza fortis (medium ground-finch): 102039987
Entry
102039987         CDS       T03755                                 
Symbol
ITGB1
Name
(RefSeq) integrin subunit beta 1
  KO
K05719  integrin beta 1
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03271  Virion - Rotavirus
gfr04145  Phagosome
gfr04510  Focal adhesion
gfr04512  ECM-receptor interaction
gfr04514  Cell adhesion molecules
gfr04530  Tight junction
gfr04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    102039987 (ITGB1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102039987 (ITGB1)
   04514 Cell adhesion molecules
    102039987 (ITGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102039987 (ITGB1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102039987 (ITGB1)
   04530 Tight junction
    102039987 (ITGB1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    102039987 (ITGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gfr04131]
    102039987 (ITGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gfr04147]
    102039987 (ITGB1)
   04515 Cell adhesion molecules [BR:gfr04515]
    102039987 (ITGB1)
   04090 CD molecules [BR:gfr04090]
    102039987 (ITGB1)
Membrane trafficking [BR:gfr04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    102039987 (ITGB1)
Exosome [BR:gfr04147]
 Exosomal proteins
  Proteins found in most exosomes
   102039987 (ITGB1)
Cell adhesion molecules [BR:gfr04515]
 Integrins
  Integrin beta subunits
   102039987 (ITGB1)
CD molecules [BR:gfr04090]
 Proteins
  102039987 (ITGB1)
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail I-EGF_1 EGF_2
Other DBs
NCBI-GeneID: 102039987
NCBI-ProteinID: XP_014163640
UniProt: A0A6I9ZAU0
LinkDB
Position
Un
AA seq 723 aa
MEDIENPRGSKQVLENREVTNRKKGAAEKLKPEAITQIQPQKLSLHLRVGEPQTISLKFK
RAEDYPIDLYYLMDLSYSMKDDLENVKSLGTALMLEMEKITSDFRIGFGSFVEKTVMPYI
STTPAKLRNPCTGDQNCTSPFSYKNVLSLTSEGNKFNELVGKQHISGNLDSPEGGFDAIM
QVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHLENNVYTMSHYYDY
PSIAHLVQKLSENNIQTIFAVTEEFQAVYKELKNLIPKSAVGTLSSNSSNVIQLIIDAYN
SLSSEVILENTKLPKGVTISYKSFCKNGVNDTQEDGRKCSNISIGDEVRFEINITANECP
KKEQNETIKIKPLGFTEEVEINLQFICECQCQSEGEPNSPACHAGNGTFECGACRCNEGR
IGRLCECSTDEVNSEDMDAYCRRENSTEICSNNGECICGQCVCKKRENTNEVYSGKYCEC
DNFNCDRSNGLICGGNGICKCRVCECFPNFTGSACDCSLDTTPCMASNGQICNGRGTCEC
GTCNCTDPKFQGPTCEMCQTCLGVCAEHKDCVQCRAFDKGEKKETCSQECMHFNMTRVES
RDKLPQPGQPDPLSHCKEKDVDDCWFYFTYSVNSNGEANVHVVETPECPSGPDIIPIVAG
VVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKY
EGK
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggaagatatagagaatcccagaggcagcaaacaggtgctcgaaaatagagaagtaaca
aatcgtaagaaaggggctgcagagaagctgaaaccagaagccattacacagatccagcca
cagaaattatcactgcatctaagagttggggaaccccagacaatttcattaaaattcaag
agagctgaagactaccccattgacctttattatcttatggacctctcctattctatgaaa
gatgatttagagaatgtgaaaagtctcggaacagctctgatgttagagatggaaaaaata
acttcagactttcggattggctttggctcttttgtggagaaaactgtgatgccttatatc
agtacaacaccagccaaactcagaaatccttgtacaggggaccagaactgtacaagtcca
tttagctataaaaatgtgcttagccttaccagtgaaggaaacaagttcaatgaacttgta
ggtaaacagcacatttctgggaacttagattctcctgaaggtggatttgatgcaataatg
caggttgcagtttgtggggaacaaattggctggaggaatgttacaagactattagtgttt
tccacggatgctggattccactttgcaggagatggtaaacttggtggaattgttctgcca
aatgatgggaaatgtcatctggaaaataatgtgtacacaatgagccactattacgattat
ccgtctattgctcatctggtacagaaacttagtgagaacaatattcagacaatctttgct
gttactgaagagtttcaggcagtctataaggaactgaaaaatctgataccaaaatcagca
gtgggaacattgtcttcaaattccagtaatgtgattcagctgatcattgatgcatacaat
tccctttcttcagaggttatcctggaaaatactaagctaccaaaaggagtgacaatcagt
tacaagtctttctgcaagaatggagtgaatgacacacaagaagatggaaggaagtgttct
aacatttctattggagatgaggttagatttgagattaatataacagctaatgaatgtcca
aagaaagaacaaaatgaaacaattaaaattaaaccactgggattcactgaagaagttgaa
attaatctccagttcatctgtgagtgtcagtgtcagagtgaaggagagcctaatagtcca
gcctgccatgcaggaaatggaacatttgaatgtggtgcctgcagatgtaatgaaggacga
attggaagactatgtgaatgtagcacagatgaagtaaatagtgaggatatggatgcttac
tgcaggagggagaacagcacagaaatctgcagtaacaatggagaatgcatttgtggacaa
tgtgtgtgcaagaagagggagaacaccaatgaggtgtattctggcaaatactgtgaatgt
gacaacttcaactgtgatcgatcaaatggtttaatctgtggaggaaacgggatctgcaag
tgcagagtgtgcgagtgtttccccaacttcactggcagcgcctgcgattgttccttggat
actacaccgtgtatggcatcgaatgggcagatttgcaatggaagaggaacctgtgaatgt
ggcacctgtaactgtacagatcccaaattccaaggccccacctgtgaaatgtgtcagact
tgcctcggtgtctgtgcagaacacaaggactgtgttcagtgcagagctttcgataagggg
gagaagaaggagacgtgttcccaggagtgcatgcacttcaacatgacgcgcgtggagagc
cgcgacaagctgccgcagcccggccagcccgacccactgtcccactgcaaagagaaggac
gtggatgactgctggttctacttcacttactctgtcaactccaatggtgaagccaatgtc
cacgtggtggagaccccagagtgccccagcggtcctgacatcattcccattgtagccggt
gtggttgctggaattgttcttattggacttgcattattattgatttggaaactactaatg
atcattcatgacagaagagaatttgctaaatttgaaaaagagaagatgaatgccaagtgg
gatacgggtgaaaatcctatttacaagagtgcagtgacgactgtggtcaatcctaaatat
gagggaaaatga

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