Geospiza fortis (medium ground-finch): 102040202
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Entry
102040202 CDS
T03755
Symbol
ERCC4
Name
(RefSeq) ERCC excision repair 4, endonuclease catalytic subunit
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03420
Nucleotide excision repair
gfr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102040202 (ERCC4)
03460 Fanconi anemia pathway
102040202 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gfr03032
]
102040202 (ERCC4)
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102040202 (ERCC4)
DNA replication proteins [BR:
gfr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102040202 (ERCC4)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
102040202 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_5
AmiA-like
AAA_11
Motif
Other DBs
NCBI-GeneID:
102040202
NCBI-ProteinID:
XP_014162265
UniProt:
A0A6I9Z959
LinkDB
All DBs
Position
Un
AA seq
854 aa
AA seq
DB search
MSLKLKKEYFIDQLRSDGVVHLPRRVTNEIANNTRYEFYTQGGVIFATSRILVVDFLTDR
IPANLITGILVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFXXXXXXX
XXXXXXKLYLWPRFHIAVHSFLEKHKPEVVEIHVAMTPAMLAIQTAILDILNACLKELKR
YNPALEVEDLSLENAIAKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKVLRTLLLYLTQYD
CVTFLNLLESLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADEKLNQKGKGSGSEK
RDVKKENELKRELVLESNPKWEALREVLKEIENENKNSDNLGGPGQVLICASDDRACAQL
REYIITGAEAFLTRLYNKTFGKDEKAGEVWIKDRKAMKSKGNAKPDTGPQAKKAKLTASS
KQNKQKKQQDRTLIQMIGKTEEEKREEVEVEDNKELSGSQESNTEETIPEDFDFSLPSDC
YYGIFKDPLTIIHPLQGCGDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKP
LRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLLRDARP
ASVSADTRKAGGQEQKGVQQTIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDI
CVERKSISDLIGSLNNGRLYAQCVAMCRYYKRPVLLIEFDPNKSFSLIPRGSLQPEISSN
DVTSKLTLLTLHFPKLRILWCPSPHATAEVFEELKQNHPQPNAETAMAVTADSEILPESD
KYNPGPQDFLLKMPGVNAKNCRALMTHVKSIAELVTLSKDELAKILGNAANATQLFDFIH
LTYAEALAKGKSKR
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgaaactgaagaaagagtattttattgatcagctgaggtcagatggagttgtt
catctccctcgacgtgttaccaatgaaattgcaaataatactcgatatgaattctataca
caaggaggagtcatctttgcaacgagtcggatccttgtggtagatttccttactgacaga
attcctgccaatctcattactggcattttggtgtacaaagcacacagaatcattgagtcc
tgtcaggaggcgttcatcttgcgactttatcgccagaagaacaagcaaggcttcattaaa
gcttttacagataatgcagttgcatttaacactggctttnntnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnggaagctttatctgtggccaagatttcatatagcagtgcactca
tttttagagaagcataagcctgaagtggtggaaatacacgtggcaatgacccctgctatg
cttgctatccagactgcaatcctggacattctgaatgcgtgtctgaaggaattgaaacgt
tacaacccagctcttgaagtagaagatctatctttagagaatgctattgctaaacctttt
gacaagacaatccgccactatttagatcctctttggcatcagcttggagctaagacaaag
tctttggtgcaggatttgaaggtcctacgtactttgctactgtatctaacccagtatgat
tgtgtcactttccttaatctcctggagtcactgaaagcaagtgaaaaagcttttggtgag
aattcaggctggctgttccttgactccagcacttcaatgtttgtgaatgctcgagctcga
gtttatcgcattgcagatgagaaactgaatcagaaaggcaaaggctcaggttctgaaaaa
cgtgatgtaaagaaggaaaatgaactgaaaagggaattggttctagaaagtaacccaaaa
tgggaagctttgagagaagtactgaaagagattgaaaatgagaataagaacagtgacaac
cttggcggtccagggcaagtgctcatttgtgccagtgatgaccgagcctgtgcacagctc
agggagtatattattactggagcagaagcttttctaacaagactttataacaaaaccttc
ggaaaggatgagaaagctggagaagtgtggattaaggacagaaaagccatgaagtccaaa
ggaaatgccaaaccagacacagggcctcaagccaaaaaagccaaactgacagcttcttca
aaacaaaataaacagaagaagcagcaagaccggactctaatccaaatgatagggaaaact
gaggaggaaaagagagaggaggtcgaggtggaagacaacaaagaattaagtggtagccaa
gaaagcaacactgaagagaccattcctgaagattttgatttcagcttgccctcagattgt
tactatgggattttcaaggacccactgacaattatccacccgctgcagggctgtggggat
ccctatgcgctcactcgggtgctgcacgaagtagaacccagatatgttgtgctgtatgat
gcagaactcacttttgttcggcagctggaaatctacaaggcaagcaggcctgggaagcct
ttgagagtttatttcctcatttatgggggctccacggaagagcagcgctacctcacagct
ctgaggaaagagaaggaggccttcgaaaaactcattcgagagaaggccagcatggttgtt
cctgaagaaagagaaggaagagatgaaacaaacttagacctcctcagagacgccagacct
gcctctgtctctgctgacacacgcaaagcaggtggacaggaacagaagggagtccagcaa
accataattgtggatatgcgggaattccgtagtgagcttccatcactgatccatcgccgt
gggatcgacattgagcctgtgactttggaagttggggattatattctaacccctgacatc
tgtgtggagcggaagagcatcagcgatctgatcggttccctgaacaacggcaggctgtac
gcacagtgcgtggccatgtgccgctactacaagcggccagtgctcctcattgagtttgat
cccaacaaatccttctccttgatcccacgaggctctttacagccagaaatttccagcaat
gatgttacttctaaactaacccttctcacactgcacttcccaaagttacgaatcctgtgg
tgtccctctccccacgctactgctgaagtctttgaagagttgaaacaaaaccatccccag
cccaatgcagaaacagcaatggccgtcaccgcagactccgaaattctccccgagtcagac
aagtacaaccctgggcctcaggacttcctgctaaaaatgccaggggttaatgcaaagaac
tgccgtgccttaatgacccacgttaaaagcattgcagagctggtgacactgtccaaggac
gagctagccaagattttgggtaatgctgccaatgccacacaactcttcgactttattcac
ctgacctatgcagaggcactagccaaaggaaaaagcaaaagatga
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