Geospiza fortis (medium ground-finch): 102041198
Help
Entry
102041198 CDS
T03755
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gfr04040
]
102041198
Ion channels [BR:
gfr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102041198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
102041198
NCBI-ProteinID:
XP_014162230
UniProt:
A0A6I9Z947
LinkDB
All DBs
Position
Un
AA seq
1973 aa
AA seq
DB search
MAQALLVPPGPESFRYFTRDSLAAIEKRSAEEKAKKPKQEHTDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPIRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINIISYFNSTV
NENGTFVNMTVSTFNWKDYIEDETHFYILEGQRDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQTTAAVAAASVASRDFSGVG
GLGELLESSSEASKLSSKSAKERRNRRKKRRQKEMSEAEDKGDIDKFPKSESEDSIRRKS
FRFSTEGSQLTYEKRLTSPHQSLLSIRGSLFSPRRNSKTSIFSFRGHAKDIGSENDFADD
EHSTLEDNESRRDSLFVPNRHGERRNSNISQASVSSRMIPALPVNGKMHSTVDCNGVVSL
VGGPSTLTSPTGQLIPEGTTTETEIRKRRLSSYQISMEMLEESAARQRAMSIASILTNTM
EELEESRQKCPPCWYRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLF
MAMEHYPMTEQFSSVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSL
MELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKISSDCVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGID
YVKKKIQEFIRKAFVRKQKSLEEIKALEELNNKKDSCISNHTAVEISKDLNYLKDGNGTT
SGVGTGSSVEKYVIDENDYMSFINNPGLTVTVPIALGESDFENLNTEEFSSESDMEESKQ
KLNASSSSEGSTVDIAPPGEGEQAEIESEEALEPEACFTEGCVQKFPCCQVSIEDGKGKT
WWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIF
ILEMLLKWVAYGFQIYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGE
MFDISDVNNYTQCVELIKSNQSARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVD
SRDVKDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPVNKFQGMIFDFVTKQVFDISIMILICLNMVTMMVETD
DQSKEMETILSRINLVFIILFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAE
MIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFI
YAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDP
HKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSED
DFEMFYEVWEKFDPDATQFMEFEKLSDFAAALEPPLHLPGRDTQINQMEDRFMTANPSKV
SYEPITTTLKRKQEEVSAVIIQRAYRRHLLRVKVKQVSSIYNRNKNKEGDGHIIKEIIIG
KLKGNSTPEKTDESSSTTSPPSYDSVTKPDKEKYEKDKAEKNYKGKDIRENKK
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactgctggtaccacctggacctgaaagcttccgctattttactagagat
tctctcgcagctattgaaaagcgttctgcagaagaaaaagctaaaaagcccaagcaagaa
catacagatgatgatgatgaaaatggtccaaagccgaacagtgacttggaggcaggaaag
acactgccatttatttatggtgacatacctccaggaatggtgtctgaacctttggaagac
ctggacccatattatatcaataaaaaaactttcatagtattgaataagggaaaagcaatt
ttccgattcagtgccacgtctgccttgtatattttaactccttttaatcccatcagaaaa
attgctatcaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagagtac
actttcactggaatttatacctttgaatcacttatcaaaattcttgcaaggggcttctgc
ttagaaggttttacttttctgcgagatccatggaactggcttgacttcagtgtcatttta
atggcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcctgaagacgattgtaggagcc
ctgattcagtctgtgaagaagctctcagatgtgatgatcctgactgtgttttgcctgagt
gtatttgcactgatagggctgcagctgttcatgggcaacctgaggaataaatgcctgcaa
tggcctccagacaattctacttttgagataaacattatttcctactttaacagcacagtg
aatgaaaacggtacttttgttaacatgacagtgagcacgtttaactggaaggattacatt
gaggatgaaactcatttttacattttggaaggacaaagagatgccctactttgtggtaat
agctctgatgcagggcaatgcccagaaggatatatatgtgtgaaagctggccgaaacccc
aattatggctacacaagttttgacaccttcagctgggcttttttgtccctgtttcggtta
atgactcaggacttctgggaaaacctctatcagctgacactgcgtgctgctgggaagaca
tacatgatattttttgttctggtgatttttctgggctctttctatctgataaacctgatc
ctggctgtggttgccatggcctatgaagaacagaaccaagcaacaatggaagaagcagag
cagaaggaggcagaatttcagcaaatgctggaacagctgaagaagcaacaagaagaagct
cagacaacagcagctgtagcagcggcatcagttgcatcaagagatttcagtggtgtaggg
ggattaggagaactcctggaaagctcttcagaagcatcaaagttgagctcaaagagtgct
aaagaaagaagaaacagaaggaagaaaagaagacagaaagaaatgtctgaagcagaggac
aaaggagatattgataagttccccaagtctgagtcagaagacagtatcagaaggaaaagt
ttccgcttctccacagaaggaagtcaactgacatatgaaaaaaggctcacttctcctcac
cagtctttgttaagcattcgtggttctctgttctcaccaagacgcaacagcaaaaccagc
attttcagtttcagaggtcatgcaaaggatataggatctgaaaatgactttgctgatgat
gagcacagcactctcgaagacaatgagagcagaagagattctctctttgttccaaatcga
catggagagaggcgcaacagtaacattagtcaggccagtgtgtcatctagaatgatacca
gcccttccagtgaatgggaagatgcacagcactgtggactgcaatggagtggtttccttg
gttggaggaccttcaactctgacttcacctactggtcagcttataccagagggcaccact
acagaaacagaaataaggaaaagaagactgagttcataccaaatttccatggaaatgcta
gaagagtctgctgcaagacaaagagcaatgagcatagccagcatacttacaaatacaatg
gaagagcttgaagaatccagacagaaatgcccaccatgctggtacagatttgcaaatact
ttcttgatctgggattgctggagtccgtggttaaaagtaaagcatgtcgtcaatttagtt
gtgatggatccatttgttgatcttgctataactatttgcattgttttaaacaccttgttc
atggccatggaacattacccaatgacagaacagtttagcagtgtcctttctgtggggaac
ctggtattcactgggatatttacagcagaaatggtactaaagattattgccatggaccct
tactattatttccaagaaggctggaatatttttgatggtattatcgttagccttagtttg
atggagcttggtcttgcaaatgttgaaggattatctgttcttcggtcattcagattgctt
cgagttttcaaattggcaaaatcttggccaactctaaatatgctgattaagattattggc
aactcagtgggagctctggggaatctgaccctggtgctggccatcattgtgttcattttc
gctgtggttgggatgcagctctttgggaagagctacaaggaatgtgtctgcaagatctcc
agtgactgtgtgctccctcgctggcacatgcacgactttttccactctttcctgattgta
ttccgagtgctgtgtggagaatggatagaaaccatgtgggactgcatggaggttgcaggc
caaaccatgtgccttattgttttcatgctagtcatggtgattggaaacctagtggtattg
aacctatttctggccttgctgctgagctcatttagttcagacaaccttgctgctacagac
gacgataatgaaatgaacaatctccagattgctgtggcaaggattcagaaaggcatagat
tatgttaaaaaaaagatacaggagttcatccgaaaagccttcgttagaaagcagaaatct
ttagaggaaatcaaagcacttgaagagctaaacaacaagaaagacagctgcatttccaat
catactgcagttgaaataagcaaagatctgaattatctcaaagacgggaatggaaccacc
agtggtgtaggcacaggcagcagtgtggaaaaatatgtaattgatgaaaatgattacatg
tcattcataaacaacccaggcctcactgtgacagtgcccattgcacttggagaatcagat
tttgaaaatttaaatacagaagaatttagcagtgaatctgatatggaagaaagcaaacag
aaactaaatgcatcaagctcatcagaaggcagcactgttgatattgctcctcctggagag
ggcgagcaagcagaaattgaaagtgaagaagctcttgaaccagaagcctgttttactgaa
ggttgtgtacagaaatttccatgttgtcaagtaagtatagaagatggcaaaggaaaaact
tggtggaatcttagaaaaacctgctacagcatagttgagcacaactggtttgagactttc
attgtattcatgattctcctcagcagtggagcactagcttttgaagacatatatattgaa
cagcgcaaaactatcaagaccatgctggaatatgctgacaaagtttttacgtatattttc
attttggaaatgcttttaaaatgggtagcatatggttttcaaatatattttactaatgcc
tggtgctggctggacttcctgattgttgacgtctcattggttagtttaatagccaatgct
ctgggctattctgaacttggtgccattaaatcgctacggacattaagagctttaagacct
ttaagagccttgtcacgatttgaaggaatgagggtggttgtaaatgcccttgtaggagca
atcccatctatcatgaatgtattgctggtatgtcttatattctggctaatcttcagcatc
atgggagtaaatctttttgctggaaaattctatcactgtgtcaacaccacaactggtgag
atgtttgatatcagtgatgtcaacaattatactcagtgtgtggaactcataaaaagcaat
caaagtgcccgatggaagaatgtgaaagtaaacttcgataatgtaggagctggatatctt
gctctgcttcaagtagctactttcaaaggatggatggatattatgtatgctgctgttgat
tcacgagatgtaaaagatcaacctaagtatgaggacaacttgtatatgtatctctatttt
gtcatctttatcatatttggatcattttttaccttgaaccttttcattggtgttattata
gacaacttcaaccaacaaaaaaagaagtttggaggtcaggatatatttatgacagaagaa
cagaagaaatattacaatgcaatgaaaaaattgggatccaaaaagccacagaaacctata
ccaaggccagtgaacaaattccaaggcatgatctttgattttgtaaccaaacaagtattt
gacatcagcatcatgatactcatctgccttaacatggtcacaatgatggtagaaacagat
gatcagagtaaagaaatggaaacaattttatcccggattaacctggtgttcattatcctt
ttcactggagaatttgtcctgaaattgatttcacttcgccattactacttcactataggc
tggaatatttttgattttgtggttgtgattctctccatagtaggtatgtttttggctgag
atgattgagaagtactttgtgtctcccacactattcagagtcatccggcttgccaggatc
ggtcgaatcctgcgcctcattaaaggcgctaagggaatccgcactctgctttttgctttg
atgatgtctcttcctgctttgttcaacattgggctgctgctcttcctggtcatgttcatc
tatgccatatttggcatgtccaactttgcctatgtcaagagggaagttgggattgatgac
atgttcaactttgaaacgtttggcaacagcatgatctgcctgttccagatcaccacatcc
gctggctgggacggtttgcttgccccaattctcaacagtggggagccagactgtgacccc
cataaagatcacccggggagctctgtgaaaggtgactgtggcaacccttctgttgggatt
ttcttctttgtcagctacattatcatatcctttctggtagtcgtgaacatgtacattgct
gtgattttggagaacttcagtgttgctactgaagaaagtgctgaacccttgagcgaggat
gactttgagatgttttatgaagtctgggagaagtttgaccccgatgcaacacaattcatg
gaatttgagaaattgtctgattttgcagcagcacttgagcctcctcttcatctacccggg
agagacacccaaataaaccagatggaagaccggtttatgacagccaatccttctaaagtc
tcctatgaaccaattacaaccacactgaaacgaaagcaggaggaggtgtctgctgtcatc
attcagcgtgcttacagacgtcatctcttaagggtaaaagttaagcaggtgtctagtata
tataatagaaataaaaacaaagaaggagatggacacattataaaagagataattattggt
aaactaaaaggaaactccaccccagaaaaaacagatgagagttcttctacaacttcccca
ccctcttatgacagtgtaacaaagccagacaaagaaaaatatgaaaaagataaagcagaa
aagaactacaaaggtaaagacatcagggaaaataaaaaataa
DBGET
integrated database retrieval system
