Geospiza fortis (medium ground-finch): 102041372
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Entry
102041372 CDS
T03755
Symbol
SCN2A
Name
(RefSeq) sodium voltage-gated channel alpha subunit 2
KO
K04834
voltage-gated sodium channel type II alpha
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gfr04040
]
102041372 (SCN2A)
Ion channels [BR:
gfr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102041372 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
IQ
ATP-synt_B
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
102041372
NCBI-ProteinID:
XP_014162209
UniProt:
A0A6I9Z935
LinkDB
All DBs
Position
Un
AA seq
2018 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRINEEKAQKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISIFNSSI
GENGTFINATMTIFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDGEEFHKSESEDSIKKKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVPALPANGKMHSTVDCNGVVSLVGG
PPALTSPTGQLLPEVMIDKAATASNGTTTETDLRKRHSSSYHVPMDYLTDPSARQRAMSI
ASMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITI
CIVLNTLFMAMEHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFD
GFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAV
ARIQKGIDYVKRKVREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTIVDIGKNLAY
LKDGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESD
LEESKEKLNASSSSEGSTVDIGLPPEGEQQEAEPEEVLEPEACFTEGCVRRFKCCQVSVE
EGKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADK
VFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCV
NTTTDERFDISQINNFSQCEELIQNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDI
MYAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVT
MMVETDDQSEEMENILYWINLVFIVLFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIV
GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSG
EPDCDPHKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATDESA
EPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMV
SGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEV
SAVIIQRAYRRHLLRQKVKKVSCIFSQDKGKEEDDLPMKEDMIMDKLNENSTPEKTDMTP
STTSPPSYDSVTKPDKDKYEKDKSEKEDKGKDSRESKK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacccgacagcttccgctacttcacaagagaa
tcccttgcagctattgagcagcgtatcaatgaagagaaagctcaaaaatccaaacaagaa
cgcaaagatgatgatgatgaagatggcccaaagccaaacagtgacttggaggcaggaaag
accctgccatttatctatggtgacatacctccaggaatggtgtccgagcccttggaagac
ctggacccatattatatcaataaaaaaacctttatagtattaaataaagggaaggcaata
ttccgattcagtgccacctctgccctgtacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcaccattttg
accaactgcgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgt
ttagaagattttacgtttctccgtgacccatggaattggctagatttcactgtcattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcctgaagacgattgtaggagcc
ctgattcagtctgtgaagaagctctcagatgtcatgatcctgactgtattttgtctgagt
gtatttgcactgatagggctgcagctgttcatgggcaacctgaggaacaaatgcctgcag
tggcctccagacaattctacttttgaaacaactgttatttcaatctttaatagctctata
ggtgaaaacggaacatttattaatgcaacaatgacaatatttaactgggatgaatacatc
gaagataaaagtcatttctacttcttggaaggacaaaatgatgcactgctgtgtggcaat
agctcagatgcaggtcaatgcccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacactgcgtgctgctgggaagaca
tacatgatattttttgttttggtcattttcctgggttctttctacctgatcaacttgatc
ctggctgtggttgccatggcctatgaagaacagaatcaagcaacaatggaagaagcagag
cagaaagaggcagaatttcagcaaatgctggaacaactgaaaaagcaacaggaagaagct
caggcggcggcagcagctgcagcagctgactcaagagattatagtggagtaggtggaata
ggtggattctccgaaagttcttctgaggcatcaaagctgagctcaaagagtgctaaagag
agaaggaatagaagaaagaaaaaaaagcaaaaagaacagtctgaaggcgaggagaaggat
ggggaagaatttcacaaatcagaatcagaggacagcatcaaaaagaaaggtttccgattt
tccattgaggggaatagactgacatatgaaaagagattctcttccccacaccagtctttg
ctgagcattcgtggctccctgttttccccaaggcgcaacagcagaacaagtcttttcagc
ttcagaggtcgagcaaaggatgtaggatcagagaatgactttgctgatgatgagcacagc
acttttgaagacaacgagagcagaagagattctctctttgttcctcatagacacggagaa
cggcgcaacagcaacatcagccaggccagtagatcatccagaacagtccctgcacttcca
gcaaatgggaagatgcacagcactgtggactgcaatggagtggtgtcgttagttgggggg
ccaccagctttgacatcgcctacgggacagcttctgccagaggtgatgattgataaagca
gccactgctagcaatggcactactacggaaactgacttaagaaagagacattctagttct
taccatgttcctatggactacctaacagaccctagtgcaaggcaaagagcaatgagtata
gccagcatgcttacaaacacaatggaagaactggaagaatccagacagaaatgtccacca
tgctggtataaatttgctaacacttgcttgatttgggactgctgtactccctggctgaaa
gtcaaacatattgtaaatttgattgtgatggacccatttgttgatctggccattacgatc
tgcatcgtcctgaacaccctattcatggccatggagcactacccaatgacagaacagttt
agtggtgtgctttcagtaggaaaccttgtgtttactggaattttcacagcagaaatgttt
ctcaagataattgccatggatccttattattatttccaagagggctggaatatttttgat
ggttttattgtgagtcttagtttaatggaacttggccttgcaaatgtagaaggattatct
gtccttcgatcgttccgcttgcttcgagttttcaaattggcaaaatcttggccaactcta
aatatgctgattaagattattggcaactcagtgggggctctggggaatctgaccctggtg
ctggccatcattgtgttcattttcgctgtggttgggatgcagctctttgggaagagctac
aaggaatgtgtctgcaagatctccagtgactgtgaacttcctcgctggcacatgcacgac
tttttccactctttcctgattgtattccgagtgctgtgtggagaatggatagaaaccatg
tgggactgcatggaggttgcaggccaaaccatgtgccttacagtcttcatgatggtcatg
gtgattggaaacctagtggtactcaacctatttctggccttgctgctgagctcatttagt
tcagacaaccttgctgctacagacgatgataatgaaatgaacaatctccagattgctgtg
gcaaggattcagaaaggcatagattatgtgaagagaaaagtgcgtgaattcatccaaaaa
gcctttgttagaaaacagaaagctttagacgaaatcaaacctcttgaagacctaaacaat
aaaaaagacagctgtatttccaaccatacaatagtagacataggtaaaaaccttgcctat
ctcaaagatgggaatggaactaccagtggcataggcagcagtgtggaaaaatatgttgtt
gatgaaagtgattacatgtcatttataaacaacccaagtctcaccgtgacagtgcctatt
gctgttggagaatcagattttgaaaatttaaacacagaggagttcagcagtgaatcagac
ctggaagaaagcaaagagaaattgaatgcatccagttcatcagaaggcagcacagttgat
attggactacctccagaaggtgaacagcaagaagcagaaccagaagaagttctagagcca
gaagcttgttttacagaagggtgtgtacggagattcaaatgctgtcaagtcagtgtagaa
gaaggaaaggggaaaatctggtggaatcttaggaaaacctgctataagattgttgaacac
aactggtttgagaccttcatagtcttcatgattcttctcagcagcggtgctctggcattt
gaagatatctacatagagcaacgtaaaactatcaagaccatgctggaatatgctgacaaa
gttttcacctatatcttcattctggaaatgcttttaaaatgggttgcttatggttttcaa
acctatttcacgaatgcatggtgctggctggacttcctgattgttgatgtctctttggtt
agcttaacagctaatgccttgggctactcagaacttggtgcgattaaatcccttaggaca
ctaagagctttgagacctctaagagccttgtcgcgatttgaagggatgagggttgtggtg
aatgccctgttaggagcaattccatctattatgaatgtgcttcttgtttgccttatattc
tggctgatatttagtatcatgggagtaaatctatttgctggaaagttttactactgtgtt
aacactacaactgatgagagatttgatatcagccaaattaacaactttagtcagtgtgag
gagctcatacaaaacaacgaaaccgcccgctggaagaatgtgaaggtcaactttgacaac
gtaggccttggttacctttctctgctccaagtggctacatttaaaggatggatggatatc
atgtacgcagctgtggattctcgtaatgttttggatcagcccaagtatgaagataaccta
tacatgtatctttactttgtcatctttatcatctttggatcattttttaccttgaacctt
tttattggtgtcatcatagacaatttcaaccagcagaaaaagaagtttggaggtcaagac
attttcatgacagaagaacagaagaaatactacaatgcaatgaaaaaattgggttcaaag
aaaccacaaaagcctatacctcgaccagcaaacaaattccaaggcatggtcttcgatttt
gtaaccaaacaagcatttgatatcagtatcatgatacttatctgccttaacatggtcaca
atgatggtggaaacagatgatcagagtgaagaaatggaaaacattttatattggattaac
ctggtgtttatcgtacttttcactggagaatttgtcctgaaattgatttcacttcgtcat
tactacttcactataggctggaatatttttgattttgtggttgtgattctctccatagta
ggtatgtttttggctgagatgattgagaagtactttgtgtctcccacactattcagagtc
atccggcttgccaggatcggtcgaatcctgcgcctcattaaaggcgctaagggaatccgc
actctgctttttgctttgatgatgtctcttcctgctttgttcaacattgggctgctgctc
ttcctggtcatgttcatctatgccatatttggcatgtccaactttgcctatgtcaagagg
gaagttgggattgatgacatgttcaactttgaaacgtttggcaacagcatgatctgcctg
ttccagatcaccacatccgctggctgggacggtttgcttgccccaattctcaacagtggg
gagccagactgtgacccccataaagatcacccggggagctctgtgaaaggtgactgtggc
aacccttctgttgggattttcttctttgtcagctacattatcatatcctttctggtagtc
gtgaacatgtacattgctgtgattttggagaacttcagtgttgctactgacgaaagtgct
gaacccttgagcgaggatgactttgagatgttttatgaagtctgggagaagtttgacccc
gatgcaacacaattcatagagttcagtaaattatcagattttgcagcttcattagatcca
cctcttctcatagcaaagcccaacaaagtccagcttattgcaatggatctgcccatggtg
agcggtgacagaattcactgccttgacatcttgtttgctttcacaaagcgtgttttgggg
gaaagtggggagatggacgccctcagaatacagatggaagatcggtttatggcagccaat
ccttctaaagtctcctatgaaccaattacaaccacactgaaacgaaagcaggaggaggtg
tctgctgtcatcattcagcgtgcttacagacgtcatctcctgaggcaaaaagtcaaaaaa
gtatcatgtatatttagtcaggataaaggtaaagaggaagatgatctgcccatgaaagaa
gatatgattatggataaactaaatgagaactccactccagaaaaaacagatatgacccca
tccacaacctccccaccttcttatgacagtgtaacaaagccagacaaggataaatatgaa
aaagacaagtcagaaaaagaagataaaggtaaagacagcagggaaagtaaaaagtaa
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integrated database retrieval system
