Geospiza fortis (medium ground-finch): 102045343
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Entry
102045343 CDS
T03755
Symbol
PDGFRB
Name
(RefSeq) platelet derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04010
MAPK signaling pathway
gfr04020
Calcium signaling pathway
gfr04510
Focal adhesion
gfr04518
Integrin signaling
gfr04540
Gap junction
gfr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102045343 (PDGFRB)
04020 Calcium signaling pathway
102045343 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
102045343 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102045343 (PDGFRB)
04540 Gap junction
102045343 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102045343 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gfr01001
]
102045343 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gfr04090
]
102045343 (PDGFRB)
Enzymes [BR:
gfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
102045343 (PDGFRB)
Protein kinases [BR:
gfr01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
102045343 (PDGFRB)
CD molecules [BR:
gfr04090
]
Proteins
102045343 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
C2-set_2
V-set
BACON_2
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
102045343
NCBI-ProteinID:
XP_005418785
UniProt:
A0A6I9HDR8
LinkDB
All DBs
Position
Un
AA seq
1093 aa
AA seq
DB search
MPCPTLRTCLWLLILTGLLEVTSGDRRLHIEPRDTELVLSLHSTFSLLCYGDRELVWERE
GQPLTASLEHRDGVFVSNLTLRNMTGHHTGEYTCTYSPEQAPEPAERRALYIYVPDPSLV
FLPAVTSEEVFIFITGYTEAVIPCRVTNPQMQVTLYEKKVENPIPATYDPQQGFKGFFED
KTYFCRTFVDDQEVDSDTFYVYRIQVSSVNVSISAVQTMVRQGENVTVMCTVSGNELVNF
NWDYPRKQAGKAVEPVTDFLPGSTHEIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKD
ITVQVIERGFVHFHTHLPRTVYAEVHKSHTIQVEVEAYPQPSIVWLKNNKTLTMESSSEF
TITSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDEQEISFHLQINVPAKVVELKEN
SSASSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTKGQPTRLLGNESAEMGVQTNTSYHA
ERQLYRVNSTLQLHRVQEPLLLRCTVHNFLGTSSQDITLVPHALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSRSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQACGDKARREAELYGNTPKEDPA
HSHLSMSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDGYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYSIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPVVPVLNNARLAASSPSSHILYTAVHQHGGENDYI
IPLPDPKPEGSSDLPQEASISRASSMLNEANTSSTISCDSPLGLQQDEEQESDPQPGCQE
PTTAHQEVEESFL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgccccactctcaggacgtgtctctggctcctcatcctcactggtctgctggag
gtgacgtctggggaccgcaggctgcacatcgaacccagggacaccgagcttgtcctcagc
ctgcacagcaccttctcccttctgtgctatggggacagagagctggtctgggaacgggag
gggcagcccctcactgcctcgctggagcacagggacggtgtgtttgtcagcaatctcacc
ctcaggaacatgacaggccatcacaccggggagtacacgtgcacctacagccctgagcag
gctccagagccagcagagaggagagccctctacatctatgttccagatccctccctggtt
ttcctccctgcagtcacctctgaagaggtcttcatcttcatcacaggctacacagaggct
gtcatcccatgccgtgtgaccaacccacagatgcaggtcaccctctatgagaagaaggtg
gagaaccccatcccagctacatatgatccacaacagggatttaaaggcttctttgaggat
aaaacctatttctgccggacatttgtggatgaccaggaggtggattcagatactttctac
gtctacaggatccaggtgtcatctgtgaacgtgtccatcagtgcagtgcagaccatggtg
cgccagggggaaaacgtcaccgtcatgtgcaccgtgagtggcaacgagctggtcaacttc
aactgggattacccccgcaagcaggcagggaaggctgtggagccagtgactgacttcctg
cctggatccactcatgagatccgctccatcctcatcatccagaatgcagagctggaggac
agtgggacctatgtctgcaatgtctctgagggctaccatgagaagacagaccggaaggac
atcactgtccaagtgattgagcgtggctttgtgcacttccacacccacctgcccagaacg
gtgtatgctgaggtccacaagagccacactatccaggtggaagtggaggcttatccccaa
cccagcattgtgtggctgaagaacaacaagacattgaccatggagagcagcagtgagttc
accatcaccagcaggaacctgtcagaaaccaggtaccagacagctctggtgctggtgcgg
gtgaagcaggaagaaggaggattttacaccattcgggcttccaatgaggatgatgagcag
gagatctccttccacctgcagataaatgtgccagctaaagtggtagagctcaaggagaac
agcagtgccagcagtggggagcagactgtaacatgctctgctgaaggcatgccccagcca
gagatcagctggtctacttgcagcgacatcaaatggtgcagcaccaagggccagcccacg
cggctgctggggaacgagtcggccgagatgggcgtgcagaccaacacctcgtaccacgcg
gagcggcagctctaccgcgtcaacagcaccctgcagctgcacagggtgcaggagcccctg
ctcctcaggtgcaccgtgcacaacttcctgggcaccagctcccaggacatcactctggtg
ccacacgccttgccgttcaaggtggtcatcatttctgtcatcctggccttgctggtcctc
actgtgatctccctgatcatcctgattgtgctgtggcagaagaaacctcgttatgaaatc
cgctggaaggtgattgagtcggtcagctctgatgggcacgagtacatctatgtggatccc
atgcagctcccttatgactccacctgggaggtgcccagggacaagctggtgttaggacgc
actctcggctccggtgcctttggtcgtgtggtggaggcaacagcccatggcctgagccat
tcccggtccaccatgaaggtggcagtcaaaatgctcaagtccacagcccgcagcagtgag
aagcaagccctcatgtccgagctgaagatcatgagccacctgggacctcacctcaacatc
gtcaacttgctgggggcctgcaccaaaggaggacccatctacatcatcacggagtactgc
cgctacggggacctggtggattacctgcaccgcaacaagcacaccttcctgcaggcctgc
ggggacaaggcacggcgagaggcggagctctacgggaacacccccaaggaggaccccgcg
cacagccacctctccatgtctgtcgagagtgacgggggctacatggacatgagcaaggat
gactccctggactatgtgcccatgtctgacatgaagggtgaagtcaagtatgctgacatc
gagtcctctaactatggcaccccctatgagctggatggctactccccctcagctcctgaa
aggacagaccgggtgacactgataaatgagtctccactcctcagctacatggacttggtg
ggcttcagcttccaggtggccaatgggatggagttcctggcttccaaaaattgtgtgcac
cgtgacctggctgccaggaatgtcctcatctgtgaggggaagctggtgaagatctgtgat
tttggcctggcgagggacatcatgagggattccaattatatctccaaaggcagtaccttc
ttgccgcttaagtggatggctccagagagcatcttcaacaacctctacactaccctgagt
gatgtgtggtcttttgggattcttctttgggagatattcactctaggagggactccatac
cctgagctgcccatgaatgaacagttctacaacgccatcaaacgtggctatcggatgtcc
aaacccacccatgcctctgatgagatctacagcatcatgcagaagtgctgggaggagaag
tttgagatcaggccatccttctcacagctggtggtgcttatgggaaacctcctggtggat
tgctacaggaagaggtaccagcaggtggatgaggagttcatgaagagcgaccaccccgcg
gttgtgcgcaccagacccgtggttcctgtgctgaacaacgcccgcctggctgccagctcc
cccagcagccacatcctgtacacagctgtgcaccagcacgggggggagaatgactacatc
atcccccttcccgaccccaaacccgaggggagctctgacctcccccaggaggcctccatc
agcagggccagctctatgctgaacgaggccaacacatcatctacaatatcctgtgacagc
cctctgggcctccagcaggacgaggagcaggaatctgacccacagccaggctgccaggag
ccaaccacagcacaccaagaggtggaggaaagtttcctgtag
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integrated database retrieval system
