Geospiza fortis (medium ground-finch): 106631846
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Entry
106631846 CDS
T03755
Name
(RefSeq) laminin subunit alpha-5-like
KO
K06240
laminin, alpha 3/5
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04382
Cornified envelope formation
gfr04510
Focal adhesion
gfr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106631846
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106631846
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106631846
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Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
EGF_2
Motif
Other DBs
NCBI-GeneID:
106631846
NCBI-ProteinID:
XP_014162948
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All DBs
Position
Un
AA seq
1268 aa
AA seq
DB search
MWTGQYCDICSSANSNKAHPITNAIDGTERWWQSPPLSRGLEFNQVNVTLDLGQLFHVAY
VLIKFANSPRPDLWVLERSTDFGLTYEPWQYFASSKRDCIEKFGQHTVDRITRDDHAICT
TEYSRIVPLENGEIVVSLVNGRPGAMNFSYSPLLRNFTKATNIRLRFLQTNTLLGHLMGK
ALRDPTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPNDPYRLQCDCQHNTCGGSCDRC
CPGYNQFPWKPATADSANECQPCNCNGHAYDCYYDPEVDRHKASRSREDKFEGGGVCIDC
QHHTTGINCERCIPGYYRSPDHPIDSPYVCYRCNCESDFTDGTCEDLTGRCYCKPNYTGE
HCHACAEGYLNFPHCYPIPAFSHNSTGEQVLPAGQIINCDCYAGGTEGNACRKDPRVGLC
VCKPNFQGTHCDQCAPGHYGPSCQPCQCSGPGQYDGTCDSDTGQCLCRTGFEGHSCDQCA
PGYFNYPLCQLCGCSAVGTLPGGCDSAGNCFCRAEFAGPRCEQCSPGYHSYPHCYACSCD
PRGAVDNNCSPAGQCRCHGNFAGHSCNQCALGFYGFPSCTLGSCNPAGLESADPSMAQGS
CACRAYVEGPACDRCKPGYWNLTPENPYGCLSCKCDTKGTISGITECRQGDGQCFCKANV
CGKLCSACKDGYFNMENANYFGCQGCRCDVGGALGPSCEARSGACRCRQSTQGPTCTQPA
RDHYFPDLHHLKFELEEGTTPSGRAVRFGYNPLEFEGFSWRGYAQMSSIQPKVVVTVNVT
SPDLFRLVFRYVSRGPASVQGRVSVLEEGKFNVCDNCTEQTKQIVFAPSTEPAFVTVPQN
SFGEPFVLNPSTWSLVVEAQGVLLDYLVLLPSSYYEAPILQLKVTEPCVYQPAPEQATQN
CLLYKYLSVEGFPAVPGVDAVCRLDNRLPRLXATEQLTPSHPPRATCSGTDVEVQLSLAV
AQPGKHVLLVEYANTNALQSVAIAVSSPRSATQQGTFTFYPCAYSFLCRGIAVDSQSRMA
TFELTSEATVRFTSDLADFFLHKVYLIPAAQFTMELIEPKVHCISVHGTFSSNSSSCVPS
RFLKLSQSIILEGAQALPIAPEVPLAQAVHVAPSGVPVEPAPRPPTAMDPTAELILLQSP
QAAVVFSSRIQSLGRYAFILHLYQPSHPSFPVEVLINGGRIWQGQTNASFCPHGYGCRSL
VVSEDQTILDVTDNDLTVVVRVPEGKQLWLDYILVVPEDSYTPQYLQEEPLDKSYDFISS
CGINSFYI
NT seq
3806 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgggccagtactgtgacatctgctcctctgcaaacagcaacaaggcccacccg
atcacaaatgccatcgatggcacagagcgctggtggcagagtccccccctgtcccggggg
ctggagttcaaccaggtcaacgtcaccctggaccttggacagctcttccacgtagcatat
gtcctgatcaagtttgccaactcccctcgtcctgacctctgggtgctggagcgatcgact
gattttggcctcacctatgagccctggcagtattttgcctcctccaagagggactgcatt
gagaagtttggccagcacactgtggaccgtatcaccagggatgaccacgccatctgcacc
acggagtactccaggattgtgcctttggaaaatggggagattgttgtctctctggtgaac
gggcgcccaggagccatgaacttctcctactcccctctgctgaggaatttcaccaaagcc
accaacatccgcctgcgcttcctgcagaccaacactctgctgggccacctgatgggcaag
gctctgagggaccccacggtcaccaggaggtactactacagcatcaaggatatcagcatt
ggagggcgctgcgtgtgccacggccacgccgacgtctgcgatgccaaggaccccaacgac
ccttacaggctgcagtgtgactgccagcacaacacctgtggtggctcctgtgaccgctgc
tgccctggctacaaccagttcccctggaagcctgccaccgccgacagcgccaacgagtgc
cagccctgcaattgcaatggccatgcctatgactgctactatgacccggaggtggatcga
cacaaagccagcaggagtcgtgaggacaagtttgaagggggaggtgtttgtattgactgc
cagcaccacaccactggcattaactgtgagaggtgcatccctggctactatcgatccccc
gaccaccccatcgactctccttacgtttgctaccgctgtaactgtgagtctgacttcacc
gatggcacctgcgaggacctgaccgggcgctgctactgcaaacccaactacaccggggag
cactgccacgcctgtgccgagggctacctcaacttcccccactgctaccccattccagct
ttctctcacaacagcactggagaacaagtgcttcctgcaggacagataataaactgcgac
tgctacgcgggagggacagaaggcaacgcctgtcggaaggacccccgggtggggctgtgt
gtgtgcaagcccaacttccagggcacacactgtgaccagtgtgccccaggccactatggg
cccagctgccagccctgccagtgctctggccctggtcagtacgatggcacctgtgacagt
gacacagggcagtgtctgtgccggacaggatttgaagggcactcgtgtgaccagtgtgct
ccaggctacttcaactaccctctgtgccagttgtgtggctgcagtgctgtggggacgctg
ccaggaggctgtgactctgctgggaattgtttctgccgagctgagtttgcagggccgcgc
tgtgagcagtgcagccctggctaccactcctacccccactgctacgcttgctcctgcgat
ccccggggtgcagtggacaacaactgcagcccagcggggcagtgccggtgccacgggaac
tttgcagggcacagctgcaaccagtgtgccctgggcttctatggattccccagctgcaca
ctgggctcctgtaacccagcagggttggagagtgcagatccctcaatggcccaaggctcc
tgtgcatgtcgggcatacgtggaaggcccagcttgtgacagatgcaagcctggatactgg
aacctgactccagagaacccctatggctgcctgagctgcaagtgtgacaccaagggcacc
atcagtggaatcacagagtgccgacagggcgatgggcagtgtttctgcaaagccaacgtg
tgtgggaagctctgctcggcctgcaaggatggctacttcaacatggagaatgctaattac
tttggctgccaaggctgccggtgcgacgtcggcggggcgctggggccgtcctgcgaggcg
cggagcggagcctgtcgctgccggcagagcacccagggtcccacctgcacacaaccagca
cgggatcattatttccctgaccttcaccacttgaaattcgagctggaggaaggcaccacg
ccgtcgggccgggctgtgcgctttggctacaaccccttggagtttgagggcttcagctgg
cgaggctatgcacagatgtcctccatccagcccaaggtagtggtgactgtcaatgtgacc
tcccccgacctcttccgcctcgtcttccgctacgtcagccgggggcccgccagtgtgcaa
gggagggtctcggtccttgaggaaggaaagtttaatgtttgtgacaactgtacagagcag
accaagcagattgtctttgctcccagcacggagccagcctttgtcactgtgccccagaac
agcttcggggagcccttcgtgctcaaccccagcacctggtccctggttgttgaagcacag
ggggtgctgctggactacttggttttgctgcccagctcatactacgaagcgccaatcctg
cagctgaaggtcacagagccttgtgtctaccagccagcccctgaacaagccacccagaac
tgcctcttgtacaagtacctgtccgtggagggcttccctgccgtgccaggggtggatgca
gtgtgcaggctggacaacaggctccccaggctgtgagccacagagcagctcaccccctcc
cacccccccagggccacctgcagtggcactgatgtggaagtgcagctgtccctggccgtg
gcccagcctgggaagcacgtgctgctggtggaatatgccaacaccaacgccctgcagagc
gtggccatcgccgtcagctcgccgcgctcggccacgcagcagggcaccttcaccttctac
ccctgcgcctacagtttcctttgtcgagggattgctgtggattcccagagtcgaatggca
acttttgaactcacctcagaggccactgttcgtttcacctctgatctggctgatttcttc
ttgcacaaagtgtacctgatccctgctgcacagttcaccatggagctcatcgagccgaag
gtgcactgcatcagtgtccatggcaccttctcatccaacagcagctcctgtgtcccctca
aggttcctgaagctttctcagtcaatcattttggagggggcccaggctctgcccattgcc
ccagaggtgcccctggctcaggctgtccatgtggctccatctggggtgccagtggagcct
gctcctcgtcctcccacagccatggatcccactgcagagctcatcctcctgcagtcccca
caggctgccgtggtgttcagcagcaggatccagagcctgggacgctacgccttcatcctg
cacctgtaccagcccagccaccccagcttccccgtggaggtgctcatcaatggaggacgc
atctggcaaggtcagaccaatgcaagtttctgccctcatggctacgggtgccggagcctg
gtggtttctgaggaccaaaccatcctggatgttaccgacaatgatctgactgtggttgtt
cgggtgccagagggcaagcagctgtggctggattacatccttgtggtgcctgaggacagc
tacaccccccagtacctgcaggaggaacccctggacaagtcctatgatttcatcagcagc
tgtggcatcaacagcttctacatcaa
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