Glossina fuscipes (tsetse fly): 119640902
Help
Entry
119640902 CDS
T09630
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
gfs
Glossina fuscipes (tsetse fly)
Pathway
gfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119640902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfs03019
]
119640902
Messenger RNA biogenesis [BR:
gfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119640902
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119640902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
CNOT1_1st
DUF3819
CNOT1_HEAT
DUF4327
Motif
Other DBs
NCBI-GeneID:
119640902
NCBI-ProteinID:
XP_037895145
UniProt:
A0A9C5Z714
LinkDB
All DBs
Position
Unknown
AA seq
2512 aa
AA seq
DB search
MNLDHLKLMLTQIGTLVKQLNKKNFTETSESLNKLIEEFGLEADRHCLRCLFSCINFNDP
SFSPLSFSISNLTIQQQVQVKFLGIQLEKQLTRASHISNICFAIDNCWFHQKGFKASAHL
VKQIVRVTGINKLSECLLCLSLTHSSQPDLRKTARDLLTRSLPELIESYLGKNQATAGVI
CSFHDISIDLLQLFLSCLEEYVPQEFLREQFVQKLRDEFPRAGVPLILAPYLYRLESVRN
LTQQKPSLQDEDGLALNSITDGYHLSINLKEIPVECVYENFCETIFSSHEHNNIMDTSWI
NLILEIGYEFTSSVEDCKNHLRSGGSVGSSSSRDLQPQDVAKIIGLMCRRHTSLLDCNVN
LPTPANFWPQQSVGGSSSQQQQQNSTNNNDGSSINSDKNATNGNDKKDKTGPSNANNGSS
STDTTQAWKPDVFVQALKEVVPQLNWKEVCLELDHPEFVIKDRVGLDLLLTIFRLATQST
LFSYPECIYRHWQTVEGQFTLIAVMLKNPDLFSFADYIFTSAPVEMLKTPPDNDNKDICA
WKSLHLVEVLLYIAEHGYYNKVHDLFKFPAQHCPDVLFLSLLHITPPLTALRQELFNQLI
PTFLANHPNSGVILGSAWSSTNFGHSLRPLIMHAMSEWYLRGAEYDQVKLSRILDVAQDL
KALSTLLNARSFLFVIDLACLASRREYLKLEKWLSDKIREHGEPFIQAMLKCLQRRCPQI
TNAKIPDDQLPPKQAQLPPDTVNTMVSCLQGCIGNVPHEIAELIMQMAANCSIMANKARV
AAAAAAQQQQTPQGLVPPQSVLRSHRGMDLGAGGGVPSGVPPPQFSANLNAQQMFGPTMD
TLSNLTTNIASLNLGGPNGAFNFGNVLSNLVSTPASPSRLMNPAAASPYPLNPMQMPAPP
PNVGPLGRMPPTAPQPTPTPPNPNNPIIADLQAPVSKEIEDEANSYFQRIYNHPPHPTLS
IDEVLDILQRFKESSIRREQEVYQCMLRNLFEEYRFFSHYPEKELQITAQLFGGIIERNL
VPTFVALGLALRCVLDALRKPEGSKLYYFGITALDRFKTRLHTYNKYCEHIRSIPHFKDF
PPHLIQYVECGYLGQEPPAAKLQMLMGAAGQQPPQDSIYRSNSVTGNLVTTPTQQKPMVV
AQSIHPARVKSIATATNIDTLLVANQEEKLTVPPEGIQDKTAFIFNNLSQLNIPQKVEEI
KDIMTKDYWPWLAQYLVLKRASMEFNFHTLYFNFLEALKNTEINKYVTKETIRNIKVLLR
SDKGVVNFSDRSLLKNLGHWLGMMTLARNRPILQIDLDLKSLLAEAYHKGQQELLFVVPF
VAKILESSNKSKVFKTPNPWTMAIMNVLGELHQEPDLKLNLKFEIEVLCKGLNIDLQKLK
PIIYLKDPGRFTVIEHQMSQPKPKAIDPSPSQQQQQQQQQQQQQQQPTSSTQHSMMSEND
AQAMMMGGAGGGVNIPGGAIPSPNLTNDGVGPLMLPAPEPRFSYVDINVTNFQLLTQHVM
LSPNIAFLHVNPGIKHIVLSAIERTLTEWLQPVVDRSVRIAASTSEQIVRKDFALDPDEH
RMRTAAHQMVRNLAAGMAMIACKDQITQTLNNNLRKVFMNALPGGPTYQDIETASMQLTN
DNVELACAFIQKTAAEKATPEIDRRLAADFETRKMAREENNRYFDAQTLAYQSERLPEQV
RLKVGGVPPNQFAVYAEFARNIPGFQPMTDRDVAMFLPKPQEMPPSFATDELGLMYAELA
SKMETFLNSCVNNSNLQLQASKMHALLNALMVTRRHRDNESALNLLNRCVEGFIEGMINI
PEHVEQMKLYRDIHLRILTLLQNTFGAPATERAITKCIFEIREEARYNIDAIKLLITSHF
INVSQFDLLLRDCMENGNNYLAVSFGTTLLERLLVDERSSSSLVETEFIGTLELLSRLTQ
HRHRYPEALSHLIDMLCGNNNAGDIGPFSSTDRYLAGATQYIHSGWQHVRVSANDCDDPP
GLQEKTEFLLKDWVSIYSQSHNLSRETKNFGSFVQKMNLYGILKTDDLITRFFRQATQFC
IDLVYRILTDPAHTPVQAKTKIFHWIDAFVHLIALLVRHSGESGNPTTKINLLNKVLGIV
LGILLQDQDIHGTAFQQLGYHRFFVMLFLELSSPDVVLESLMHSIVTAFSHTYHLLNPSL
APGFCYAWLELISHRIFIGRILAQIPQQKGWPLYAQLLLDLFKYLAPFLRNAELAKPVQL
LYRGTLRVLLVLLHDFPEFLCDYHFGFCDAIPPNCIQMRNIILAAFPRNMRLPDPFTPNL
KVDMLAETASAPKICTNYAINIQPVNFKKDLDSYLKARAPVTFLSELRSHLQISNEPGSR
YNIPLMNALVLYVGTQAIAHIRSKNFVPNTSNIAHSAHMDIFQNLAVDLDTEGRYLFLNA
IANQLRYPNSHTHYFSCAVLHLFAEANSEAIQEQITRVLLERLIVNRPHPWGLLITFIEL
IKNPIYKFWDHDFVHCAPEISKLFESVARSCMVKSNHPQQMNNMDGEIQEIN
NT seq
7539 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagaccatctgaaattgatgcttacgcagattggtacattggttaaacaattg
aataagaaaaattttaccgaaaccagcgaaagccttaataagttgattgaagaatttggc
ttggaagcggatcgacattgtctgcgttgtttgttttcatgtattaattttaatgatcca
tcattctcaccgttatcattttcaatatcaaatttaacgatacaacagcaagttcaagtg
aaattcttaggtatccaattggaaaagcaactgacgagagcttcacacatctccaacatc
tgttttgctatcgataattgttggtttcatcaaaagggctttaaagcgtcagcgcatctg
gtaaaacaaattgtacgtgtaactggcatcaacaagttgagtgagtgccttttatgttta
tctttaactcactcgtcgcaaccggatttacgtaaaaccgctcgagatcttctaacgcga
tcgttgcctgaacttatagaatcgtatctgggtaaaaatcaagcaacggcaggtgtaatt
tgcagttttcacgacatctctatcgatttgttgcaattgtttttatcctgtttggaagaa
tacgtaccgcaagaatttctacgtgagcaatttgtacagaaactacgcgacgaattcccg
cgagctggtgttcctctgatattagcaccatatttgtaccgtttggaatccgtcagaaac
ttaactcaacaaaagccgtcgctacaagatgaggacgggttggccttaaactctattact
gatggctaccacttgtcaattaatttaaaagaaatcccagttgaatgtgtttacgagaat
ttctgcgaaacaatattttcatcacacgagcacaataatattatggacacatcctggatt
aatttaatccttgaaattggttatgaattcacttcaagcgttgaagattgtaaaaatcac
ttacgcagcggaggtagtgtaggtagtagtagtagtcgagatttacaaccgcaagatgtt
gctaaaattattggtcttatgtgtcgtcgacatacatcgctattagattgcaatgtaaac
ttaccaacaccagcaaatttttggccacaacagtctgttggtggtagcagtagtcaacag
cagcagcagaactctaccaataacaatgatggttcgtcgattaattcggataaaaacgca
acaaacggcaatgacaaaaaagacaaaacagggccgagtaacgctaataacggttcgagc
agcacagatactacacaggcctggaaaccagatgtattcgttcaagctctcaaagaggta
gtgccgcaattgaactggaaggaagtgtgtttagagcttgatcatcccgaatttgtaata
aaggatcgcgttggacttgatcttctcttaaccatatttcgtttggctacgcaatcaacg
ttgttttcttatccagaatgcatttaccgtcattggcaaaccgtggaaggtcagtttacg
ctgattgcagtgatgctgaagaatcccgatctattctcgtttgcggattatatctttaca
tcagctccagtggaaatgttaaaaactccgcctgacaacgataataaagatatttgcgcc
tggaagtccctccatcttgttgaagtcctattatatattgcggaacatggttattacaac
aaagttcacgatctgtttaaatttcctgcacaacattgtcctgatgttctcttcctttca
ttgttgcacatcacaccgcctctaactgctttgcgtcaggaactattcaatcaattaatt
ccgacatttctggccaatcatccaaactcaggagtgatattaggaagtgcgtggagctct
actaattttggccactctctaagacccttaataatgcatgcaatgtctgaatggtacctt
agaggcgcagagtatgatcaagtaaaactctcccgcatcctggacgtggcccaagatttg
aaagcactttctactctcttaaatgccagatctttcctatttgttattgatttagcttgc
ttggcttctcgccgcgaatatttgaagcttgaaaaatggctcagcgataaaattcgtgaa
cacggcgagccatttattcaggcgatgttgaagtgtcttcaacgaagatgtcctcaaata
accaacgcaaagataccagacgatcaattgccgccaaagcaagcgcagctgcctccagac
actgttaatacaatggtttcatgtttacaaggttgcattggcaacgttccacatgaaata
gccgagctcattatgcaaatggctgccaattgttccattatggcaaacaaagcgcgagtt
gccgctgctgcggctgcacagcaacaacaaactccacaaggcttggtgccacctcaaagt
gttttacgtagtcatcgtgggatggacttgggagccggtggcggtgtgccgagcggcgta
ccaccgccgcagttttcagcaaatctaaatgcccagcaaatgttcggtcctaccatggac
actctatcgaatttgaccacaaatattgctagtctcaacctcggtggacccaatggagct
ttcaactttggcaatgtattaagtaacttggtatccacgccggcgtcaccatcacgtctg
atgaatccagcagctgctagtccataccccttgaatccaatgcaaatgccggcgccgcca
ccgaacgtaggaccgttaggtcgtatgcctcctactgctccgcagccaacaccaacaccg
ccgaatccaaataatcctataatagctgaccttcaagcccctgtttccaaagagatcgaa
gatgaagccaattcgtatttccagcgcatatataaccatccacctcatccgactctgtct
atagatgaggtgctggacattttacaacgtttcaaggaatccagcatacgacgtgagcag
gaagtgtatcaatgtatgttacgcaatctcttcgaggaatatcgttttttttcgcattac
ccggaaaaagagttacaaatcacggcgcagctttttggtggcataattgaacgtaatttg
gtgccgacttttgtggcattaggactagcgttacgatgtgtcttagatgcattacgaaaa
ccggaggggtcaaaactgtactactttggcattacagctctggatcgttttaaaacgcgc
ctgcatacgtacaacaaatactgcgagcatatcaggtcgattccacattttaaggatttt
ccaccacatttgatacaatatgttgaatgcggttatcttggccaagaaccgcctgcagct
aaattacaaatgctaatgggggctgccggacaacaaccgccgcaggattcaatatatcgc
agtaattctgttacaggcaaccttgttactacgccaactcaacaaaagccaatggtagtc
gcgcaatccattcatccggcccgtgtgaaatcaattgccacggctacaaatatcgacact
ctactagtggctaatcaggaagagaaattgactgtaccaccagaaggtattcaggataaa
actgctttcatatttaacaacctcagccaattgaatattccgcaaaaagttgaagaaatt
aaggatattatgaccaaagactattggccttggctagctcaatatttggttctaaagaga
gcttctatggaattcaacttccacacattgtacttcaattttttggaggctttaaaaaat
accgagatcaataaatatgtcactaaagagacaatacgaaatataaaggtcttattgcgt
tcagataagggcgtagttaacttttcagatcgtagcttattgaaaaaccttggccattgg
ttaggtatgatgaccttggctcgtaacagaccaatactgcaaatagatctagacttgaag
tccttattggcagaagcttatcataaaggacaacaagaattgctttttgtggtacctttt
gtggctaaaattctggaatcatcaaataaatcgaaagtgtttaaaaccccaaatccttgg
acaatggccataatgaatgtgttgggagagttacatcaggaacccgacttaaagttgaat
ttgaaatttgaaatcgaagttctttgtaaaggtctaaacattgatttgcagaaattaaaa
ccaataatataccttaaagatcctggtcgtttcacggtaattgaacaccaaatgtcacag
ccgaaaccgaaagctatagatccctcgccttcccaacagcaacaacaacagcaacaacag
cagcagcaacaacagcagcctacctctagcacacaacattcaatgatgtcggaaaatgac
gcacaagctatgatgatgggtggagccggtggtggtgtcaacattccgggtggggctata
ccatcacctaatctcaccaatgacggtgtcggaccattaatgttgcccgctccagagcca
cgtttttcgtatgtagatattaatgtgacaaactttcaacttttaacccaacatgtgatg
ctgtcccctaacattgcatttttgcatgtaaatcctggaataaagcatatagtgctaagt
gctatcgaacgtaccctaaccgaatggttacaacctgtcgtcgatcgtagcgttcgtatt
gctgcgtccacttccgagcaaattgttcgcaaagattttgctcttgaccctgatgaacat
cgtatgcgcactgcggcccatcaaatggtacgtaatcttgccgcaggcatggcaatgatt
gcttgcaaagatcaaatcacgcaaaccttgaataacaatctgcgtaaagtcttcatgaat
gctctgccgggagggccaacataccaagatattgaaactgcatccatgcagctaacaaac
gacaacgtagaattggcatgcgctttcatacaaaaaactgctgctgaaaaagctactccc
gaaatagatcgtcgtcttgcagctgattttgaaacacgtaaaatggcccgcgaagagaac
aatcgttactttgacgcccaaactttggcgtatcaatcagagcgcttacctgaacaagtg
cgtcttaaagtcggtggagtaccgccaaatcaatttgcagtgtatgcagaatttgcccgc
aacatacccggattccaaccaatgaccgaccgtgatgtcgctatgtttttacccaaacct
caagaaatgccccccagttttgccactgacgaattgggtcttatgtacgctgaattggcc
agcaaaatggaaactttcctcaatagttgtgttaacaattctaatttacaattgcaagct
agtaaaatgcatgcgctacttaacgctctcatggttactcggcgtcatcgcgacaacgaa
tccgcgttaaacttacttaaccgttgtgttgaaggttttattgaaggcatgatcaatatt
cccgaacacgttgaacaaatgaaattatatcgtgacatacatttacgcatattaactttg
cttcagaacacattcggcgcaccggccactgaacgcgccatcacgaaatgcatttttgaa
attcgcgaagaagctcgctacaatatagatgcaattaaattgcttataacatcgcatttc
ataaatgttagccaattcgatttgttactacgtgattgcatggaaaatggcaacaattat
ttagctgtatcgtttggaaccacgcttttggaacgcctgctagtggatgaacgctcaagc
tctagtttagtagaaaccgaattcatcggcaccttagagttgttaagtcgtcttacccaa
caccgtcaccgttatccagaggccttgtcccatttgattgacatgttgtgtggtaataac
aatgctggagacattgggccatttagttcaacggatcgttacttggcaggagctacacaa
tatatacattcgggatggcaacatgtcagggtaagtgcaaacgattgcgatgatccgccc
ggcttgcaagagaagacagaatttctactaaaagattgggtctctatttattcgcaatct
cacaatttatcgcgagaaactaaaaattttggatcgtttgtgcagaaaatgaatctttac
ggtatattaaaaactgacgacttgattacgcggttctttcgtcaggcgactcagttttgt
attgatttggtgtatcgcattctgactgaccctgcgcacactcccgtgcaggcgaagaca
aagattttccattggatagacgcttttgtgcatttgatagccctcctcgttcgtcattcc
ggtgaatctgggaatcctaccactaagatcaacttgctcaacaaggttttgggcattgtt
ttgggaattttgctacaagatcaagatatacacggtaccgcattccaacagcttggttat
catcgattttttgtcatgctcttccttgagcttagctcgccggatgttgttttagaatca
ttgatgcatagcattgtaactgctttttcgcacacctaccatctcctaaatccatccctt
gcaccaggtttctgttacgcgtggctggagcttatttctcatcgcatatttattggacgc
attctcgcgcagattcctcaacagaaaggatggccattatatgctcaattgctattagat
ctcttcaagtatctggcacctttcctccggaacgccgaactagcgaaaccagtacagttg
ctgtatcgtggaactttacgagttttgctcgtgttgttacacgatttccccgaatttctt
tgcgattatcattttggtttctgtgatgccataccaccaaactgtattcagatgcgcaac
atcattctggcggctttcccacgaaatatgcgcttacctgatccatttactccaaactta
aaagtcgacatgctggctgaaacggcttcagcaccaaaaatttgtaccaattatgcaata
aatatacaaccagttaattttaaaaaggatcttgattcttatctaaaagctcgagctccg
gttacgttcctgtctgagttacgcagtcatctacagatatcaaatgagcccggttcacgg
tacaatataccgctaatgaacgctcttgtattgtacgtgggtactcaagcgattgcacac
attagaagtaaaaatttcgttcccaatacatcaaatattgcgcatagtgctcatatggat
atattccaaaacttggctgttgatttagatactgagggccgttatctttttcttaatgca
attgccaatcagttacgttatcctaacagtcatacgcactattttagctgcgctgtttta
catctctttgctgaggccaactccgaagccatacaagaacaaataaccagagtattattg
gagcgccttatagtgaatcgtccacatccctggggcttattgataacgttcattgaactt
atcaagaatcccatatataaattttgggatcacgactttgttcattgcgcaccagaaata
tcaaaactcttcgaatcggttgcccgctcttgcatggtaaaatcgaatcatcctcaacag
atgaacaatatggatggagaaattcaggagattaattga
DBGET
integrated database retrieval system
