Glossina fuscipes (tsetse fly): 119642608
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Entry
119642608 CDS
T09630
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06236
collagen type I alpha
Organism
gfs
Glossina fuscipes (tsetse fly)
Pathway
gfs04512
ECM-receptor interaction
gfs04518
Integrin signaling
gfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119642608
04518 Integrin signaling
119642608
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119642608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gfs00536
]
119642608
Glycosaminoglycan binding proteins [BR:
gfs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119642608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
CRA
Motif
Other DBs
NCBI-GeneID:
119642608
NCBI-ProteinID:
XP_037897727
UniProt:
A0A9C5ZJF8
LinkDB
All DBs
Position
Unknown
AA seq
1566 aa
AA seq
DB search
MHLKFATLFSLLIILCIVIETNSATGELRQNSKKNVDDDKNGTRGSGKSLKKTKKTTNRK
GLEELPQNEEPKRSIGELAGLDDLDSYDYSNYDEDSDTNVDVDSEVQETSVPRARAVDNI
IRPFSCQFEGNWYRENDEFTAERGSCLHNCVCAEGKVLCRPSASCSLGRRDSLQSSEERS
TMLPLTTSTTIATTTHPLPPHNPFEAPAIGPQGEPGYPGSQGPMGEPGFPGSPGTPGIPG
SPGRPGPTPDISFYHQQLAAEYGNSEKGPGNDPLFGVAPVQYVQTSAGHPGPRGPPGGVG
PSGPQGFQGIRGEPGESGLQGPPGPMGPRGLPGSPGKDGLPGEDGEVGAPGLAGTPGPRG
LPGLPGQPGLKGHRGLPGLDGAKGEQGALGEKGSTGSMGPVGLPGPIGPAGPRGERGREG
AAGPSGIRGLDGNPGSPGQPGSVGKPGPPGFPGIPGAKGDAGPLGSKGEPGIQGPRGEAG
RPGAAGEPGLSGPTGKDGFSGEKGATGAMGLMGPQGFPGARGPDGLTGSPGEPGIKGVPG
QPGEKGYKGDMGIKGETGLAGPRGLPGTVGPEGKRGKRGIRGPTGPGGPHGERGPHGLPG
LPGPDGPVGPKGIAGDRGIQGPIGDKGGPGDAGPTGIPGLQGLRGLPGRIGPVGRQGPPG
ERGIPGADGKLGDQGHPGLQGLPGPMGLPGDKGFPGDPGKTGEPGVVGSTGPRGDNGKDG
LPGTQGAPGVPGQDGVRGEPGPIGPRGFQGLPGVAGTAGASGKDGNQGPPGPQGLTGAAG
IRGERGFPGERGSVGQPGPTGERGELGLPGNDGPPGPTGKPGEKGHSGSPGMMGLPGLKG
VQGIMGEKGERGNVGPIGPEGPLGRPGDRGLQGNIGPPGPPGETGERGDAGNPGQPGEQG
ATGTTGERGALGLPGPIGFPGSPGLTGMPGPKGDRGLMGVKGEQGNPGMLGPPGEQGLPG
PVGLLGPKGARGEIGQRGEVGLSGLPGRPGDVGSPGQPGSQGLPGIAGLPGLKGNPGELG
RSGLPGSPGLQGPQGLEGQKGETGSDGPQGAIGHPGLPGPAGERGIPGLPGHPGSAGPRG
MRGPPGEIGQQGKQGKEGSPGSQGLVGQTGPPGPMGEQGPEGPSGKMGPPGMAGRLGDKG
PPGQPGPQGHVGSPGIPGPPGPIGAAGPQGERGSKGETGLPGMEGAIGLRGKSGPPGSEG
SKGEPGEVGPKGTKGHRGLIGLQGISGTPGLKGDVGPTGAPGFPGKPGEIGERGPQGRDG
NTGPPGPPGQPGVRGFPGSDGKPGAVGLIGPPGPPGPPGETLGYDVAALTALLNQGSHIK
GVDILDDQPLNQLTEGLTDEEKHSLVMKAFEHVKASFERIRRPNGQQSSPAKTCRDLFAA
YPEYQTGEYWIDPNEGDPRDAILVHCEREKKATCIVPQPRETQVLNYNGGNKEVWLGEIA
GGMKVNYKADAHQLGFLQLMSAKASQQIIFHCKKTVAYGDDKYNSSSNGLKLLSWNDSEL
SPHGPQRLRYVAEIDDCSKPSNNWAKTIITYTTDKSQRLPIVDLAIGDVGENLQQFRIQF
GSACFY
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaaaatttgcaacattattttcattattaattatactgtgcatcgtgattgaa
actaatagtgccactggagaattaagacaaaattctaagaagaatgttgacgatgataaa
aatgggaccagaggcagtggaaaatctttaaagaaaacaaaaaaaacaacaaatcgcaaa
ggtttagaagaactgccgcaaaatgaagagcctaagcgaagcattggtgaactggccggc
ttagacgatttggacagttatgattatagtaactatgatgaagattccgatactaatgtt
gatgttgattcagaagttcaagaaacttccgtcccccgcgctcgagccgtggataacatc
ataaggccgttttcttgccaatttgaaggtaattggtatcgcgaaaatgatgaatttact
gccgaacgtggtagttgcttgcataactgtgtttgtgctgagggtaaagtgctatgccgt
ccttctgcaagttgtagtcttggacgaagggattctttacagtcctctgaggagaggtct
acaatgcttcctttgacaacatcaactactattgcgactactactcatcccctacctcca
cacaatccatttgaagcacctgcaattggtcctcaaggtgaacctggttatcccggttct
cagggaccgatgggagaacctggatttcctggatcgcctggaactcctggcattcccggt
tctcctggtcggcctggacctacacctgatataagcttttatcaccagcaattggcagct
gaatatggtaattctgaaaaaggccctggtaatgatcctttatttggagtagctcctgtg
caatatgtgcagacttcagctggtcaccctggtcctcgaggacctccaggtggtgtaggt
ccgtcaggacctcaaggttttcaaggtatccgtggtgaacccggcgagtcaggtcttcaa
gggccccccgggcccatgggacctaggggcttacccggttctcctggtaaagacggattg
cccggtgaagatggcgaagttggcgctccgggtctggctggaactccgggtccccgtggt
ttacctggcctgcctggtcaacctggtctaaagggacatcgcggcttgccgggcctagat
ggtgctaagggcgagcagggagctcttggagagaaagggtcgactggtagtatgggtcct
gttggtcttcctggtcctattggccctgcaggtccccggggtgaacgtggtcgtgaaggt
gccgctggaccttctggtattcgcggtttagatggtaaccctggttctcctggtcagccc
ggttctgtaggaaagccaggcccacccggttttcctggtatacctggtgctaagggtgac
gcaggccctttaggctctaaaggtgagccaggaattcagggtccgcgtggtgaagcaggc
cggccgggtgctgctggtgaaccgggcctttccggtccaacaggaaaagatggtttttca
ggtgaaaaaggtgccacgggggctatgggactaatgggtcctcaaggctttcctggtgct
agagggccagatggtttaactggcagccctggtgagcctggtataaaaggtgttcctggc
caaccaggcgaaaagggttataaaggggatatgggcataaagggtgagaccgggctggcg
ggccctcgcggcttacctggtacagtagggcctgaaggcaagcgtggaaaacgtggaata
cgcggtcctacaggtcccggtggtccccatggtgaacgtggacctcacggtctgcccggg
ttgccgggtcctgacggaccagttggcccaaaaggcattgcaggcgacagaggtatacag
ggtccgattggagataaaggtggcccaggggatgcgggacctaccggaattcctggattg
caaggcttgcgtggtttacccggtcgcattggacctgtgggtcggcaagggccgcctggt
gaacgtggtatacctggagcggacggaaaacttggtgaccaaggacatccgggacttcag
ggtttaccaggacccatgggtttaccaggtgacaaaggttttcccggagacccaggaaaa
actggcgaacctggtgttgttggaagtactggacctcgcggtgacaatggcaaagatggg
cttcctggtactcaaggtgcgcctggtgttcctggtcaagacggtgttcgtggtgaacca
gggccaatcggacctagaggtttccaaggtttgcccggcgttgcgggaactgcaggcgca
tcggggaaagacggcaatcaagggccgcctggcccgcagggtttgacaggagctgctggt
atcagaggcgaacgtggattccctggtgaacgaggttcagtcggacaacctggacccact
ggcgaaagaggtgaactaggtttgcctggcaatgatggaccgccgggacccactggaaaa
cctggtgagaaagggcattcgggttcaccgggaatgatgggcttgcctggtcttaaaggt
gtgcaaggaataatgggcgaaaaaggcgagcgtggtaatgtaggaccaattggaccagaa
ggtccacttggtcggcctggtgaccgcggtcttcaaggaaatattggacctcctgggcct
cctggtgaaacaggagaaagaggagatgcagggaatccgggacaacccggtgaacaggga
gctactggaaccactggagagaggggtgcattaggcctcccgggtcccataggtttcccg
ggatcaccaggattgacaggaatgcctggcccaaaaggcgatcgtggcctcatgggtgtt
aaaggcgaacaaggcaatccaggcatgctaggcccacccggtgaacaaggcttaccgggt
cctgttggactgctaggaccgaaaggtgctaggggtgaaataggccaaagaggggaagtt
gggctaagtggattgcctggcagaccgggcgatgtgggttctccgggtcaaccaggaagt
caaggattaccaggtattgctggtctaccaggattaaaaggtaatcctggagagctcgga
cggtcaggtttgccagggagtccgggcttgcaagggcctcaaggcttggaaggtcaaaaa
ggagaaacaggtagtgatggtcctcaaggagccatcgggcatcctggactgccagggcca
gcgggagaaagaggaattccaggcttgccaggacatccaggatcggcaggtccgcgggga
atgagaggaccaccaggtgaaatcggtcaacaaggcaagcaaggcaaagaaggatcgcca
gggtcgcaagggttagtcggacaaacaggtccaccaggaccaatgggagaacaaggcccg
gaaggaccttctggaaagatggggcctccaggtatggccggtagacttggggacaaaggg
cctccaggtcaacccggaccacaaggtcatgtgggtagtccaggtatcccaggaccgccg
ggccctattggcgctgctggtccccaaggagaacgcggctctaaaggggaaaccggttta
ccaggtatggagggagcaattggattaagagggaaatctggtccccccggttctgaaggt
tctaaaggagaacctggagaagttggtcccaaaggaacgaaaggacatcgtggtctcata
ggtctacaaggcatttcaggcacgccaggattaaagggagacgtaggtcctacaggagct
cctggctttcctggaaaacctggtgagattggagaacgaggtccccaaggaagggatggt
aacacaggtccgcctggaccacctggccaaccaggggtaaggggtttccccggaagtgat
ggtaagcccggcgctgtgggattgataggtccgccagggcctccgggcccaccgggcgag
acattaggttatgatgtcgcagctttaacagctttgctcaatcaaggtagccacattaaa
ggagtagacattttagacgatcagcctttaaaccaattaactgaagggttaacagatgaa
gaaaaacattctttagttatgaaagcttttgaacatgtcaaagcttcattcgagagaata
cggcgacctaacggtcaacaaagctctccagctaaaacctgcagggatttatttgctgcc
tatccagaatatcagacaggtgaatattggatagatcctaatgaaggtgatccaagggat
gcaatactggttcattgtgaacgtgaaaaaaaggctacttgcatagtgccacaaccaaga
gaaacccaggtactaaattacaatggtggaaacaaagaggtatggctaggagaaatcgcg
ggggggatgaaagttaactataaagctgacgcccatcaattgggattcctgcaattaatg
tctgctaaggcttcgcagcaaattattttccattgtaagaagactgtagcttatggggat
gataaatataattcttccagcaatggactgaagttattgtcctggaatgattctgagctt
tcgccgcacggaccacaacgtttgcgttatgttgcggaaattgacgattgcagtaaaccc
tccaacaattgggctaaaacaataataacttacacaactgataagtcacaacgtctgcct
atagtcgacttagctattggagatgtaggagaaaatctacaacaatttcgcattcaattt
ggatcggcctgtttttactag
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integrated database retrieval system