Gemmobacter fulvus: KM031_13295
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Entry
KM031_13295 CDS
T07830
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
gfu
Gemmobacter fulvus
Pathway
gfu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KM031_13295 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gfu03400
]
KM031_13295 (uvrB)
DNA repair and recombination proteins [BR:
gfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KM031_13295 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KM031_13295 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
AAA_19
FAM192A_Fyv6_N
Kinesin
Mg_chelatase
DUF87
AAA
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QWK89803
UniProt:
A0A975P6A2
LinkDB
All DBs
Position
complement(2746694..2748871)
Genome browser
AA seq
725 aa
AA seq
DB search
MPHNNINAPTERPEVLTRPKLEGGRKFVLHTPFQPAGDQPTAIAELTAGITAGEHNQVLL
GATGTGKTFTMAKVIEQTQRPAIILAPNKTLAAQLYGEFKGFFPENAVEYFVSYYDYYQP
EAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSAMT
QDLVVGQSYDPRQVVAELVAQQYRRNDQGFQRGSFRVRGDSLEVWPAHLEDRAWRFSFFG
EELEGIMEFDPLTGAKTDVFKQIRIYANSHYVTPRPTMQQAVIGIKRELRQRLDQLVNEG
KLLEAQRLEQRCNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFAD
ESHVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSIFVSATPSS
WEMEQAGGAFAEQVIRPTGLLDPVVEIRPVDMQVDDLLDEIRRVAAQGLRILVTTLTKRM
AEDLTEYFHEQGIRIRYMHSDIDTIERIEILRDLRLGAFDVLVGINLLREGLDIPECGLV
AILDADKEGFLRSETSLIQTIGRAARNAEGRVIMYADRITGSMERALAETNRRRDKQIAY
NLKHGITPQTVKKNVEDVLAGLWQGDTDMSRVTAKVEKSLVGSNLAAHLDGLRLQMRKAA
ENLEFEEAARLRDEVKRLEAVELTIADDPLARQSAVEEAVDAAVKSSGRSTAGRAGQRGG
TKRRR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacaacaatatcaatgcccccaccgaacgccccgaggtgctgacccgccccaaa
ctggagggcgggcgcaaatttgtgctgcacacacccttccaacccgcaggcgatcagccc
accgcgattgcggagttaacggcgggcatcaccgcaggcgagcacaatcaggtgcttctg
ggcgcgaccggaaccggcaaaaccttcaccatggccaaggtgatcgaacagacccagcgc
ccggccatcatcctggcccccaacaagacgctggcggcgcaattatacggcgaattcaaa
ggcttcttccctgaaaacgccgttgagtatttcgtgagctattacgactactaccaaccc
gaggcctatgtcgcccggtcagacacctatatcgagaaagaaagccagatcaacgaacag
atcgaccggatgcgccactcggccacccgggcgctgctggaacgtgacgatgtgatcatc
gtggcgtctgtcagctgtatctatggtatcggctcggtcgagacctattcggcgatgacg
caggatcttgtggtcgggcagagctatgacccgcgacaggttgtggcggaactggtggcg
caacaatatcgccgcaacgatcagggctttcagcgcggctcgttccgggtgcgcggcgac
agtctggaagtctggcctgcccaccttgaagaccgggcatggcgcttttcctttttcgga
gaagagcttgaaggcatcatggaattcgatccgctgaccggggcgaagacggatgtgttc
aagcagatccgcatctatgccaattcccactatgtcacgccgcgcccgaccatgcagcag
gcggtgatcggtatcaaacgcgagctgcggcagcggctggatcaactggtgaacgagggc
aagctgctggaggcgcagcggctggagcagcgctgcaatttcgatctggaaatgctggag
gcgactggcgtctgcaacgggatcgagaattattcgcgctacctgaccgggcgcgcgccg
ggcgaaccgccgccgaccctgttcgaattcatccccgacaatgccattgtgttcgccgac
gaatcccacgtgtcggtgccgcagatcggcggcatgtacaaaggcgactatcggcgcaag
ttcaccctggccgaacatggtttccgcttgccctcctgcatggacaaccgcccgctgaaa
ttcgaggaatgggatgcgatgcgcccgcaatccatcttcgtttcggccacgccctcttcc
tgggaaatggaacaggcgggcggcgcttttgccgaacaggtgatccgcccgaccggcctg
ctggatccggtggtggaaatccgcccggtcgatatgcaggtggacgatctgctggacgaa
atccgccgggtggccgcccaggggttgcggattctggtcacgaccctgaccaaacgcatg
gccgaggatctgaccgaatatttccacgaacagggcatccgcatccgctatatgcactcg
gacatcgacaccatcgaacgtattgaaatcctgcgggatttacggctgggggcctttgac
gttctggtggggatcaacctgttgcgcgaaggtctggatattcccgaatgtggccttgtg
gcgattctggatgccgacaaagaggggtttctgcgctcggaaacctcgctgatccagacc
attggccgcgccgcccgcaacgccgaaggccgggtcatcatgtatgccgaccggatcacc
ggcagcatggaacgcgctctggccgaaaccaaccggcgccgcgacaagcagattgcctat
aacctgaagcatggcatcacgccgcagacggtgaaaaagaacgtcgaagacgtgctggcc
gggctgtggcagggcgataccgatatgtcgcgcgtcacggcgaaggttgaaaaatcgctg
gtcggctctaacctggctgcgcatctggacgggttgcggttgcaaatgcgcaaggcggcc
gagaatctggagtttgaagaggccgcccgcctgcgcgacgaggtgaagcggctggaggcc
gtcgagttgacgattgccgatgacccgctggcccggcaaagtgccgtggaagaggcggtg
gatgccgcggtgaaatcctctggccgctctaccgcagggcgtgcagggcaaaggggcggc
acgaagcgccgccgctga
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integrated database retrieval system
