Gallus gallus (chicken): 423131
Help
Entry
423131 CDS
T01006
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
423131 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
423131 (CLP1)
Enzymes [BR:
gga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
423131 (CLP1)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
423131 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
AAA_16
MMR_HSR1
AAA_18
ATP_bind_1
AAA_22
TniB
CbiA
nSTAND3
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
423131
NCBI-ProteinID:
NP_001012292
CGNC:
5568
Ensembl:
ENSGALG00000007370
UniProt:
Q5ZJL4
LinkDB
All DBs
Position
5:complement(17249282..17251526)
Genome browser
AA seq
425 aa
AA seq
DB search
MADDGGDEKKQVAKFELERETELRFEVEASQTVQMELLTGMAEVFGTELTRNKKFTFDAG
AKVAVFTWHGCTVQLSGRTEVAYVSKDTPMLLYLNTHTALEQIRRQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSL
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDR
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSMADSPDDNISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgatggcggcgatgagaagaagcaggtggcaaaattcgagctcgagcgggag
acagagctgcgtttcgaagtggaggcctcgcagacggtgcagatggagctgctcaccggc
atggctgaggtgtttggcaccgagctcacccgcaacaagaaattcacctttgacgccggt
gcaaaggtggccgtcttcacctggcacggctgcaccgtgcagctcagcgggcgcaccgag
gtggcgtatgtctccaaggacacccccatgctgctctacctcaacactcatacggccctg
gagcagatacggcggcaggcagagcgcgaggacgagcgggggccccgtgtcatggtggtg
ggccccaccgatgtgggcaagtcaaccgtgtgccgcctgctgctgaactatgctgtacgc
ctggggcgccggcccacctttgtggagctggacgtggggcagggctccgtctccatcccc
ggcaccatgggagccctctacattgagcggccggctgacgtggaggagggcttctccctg
caggccccgctggtctaccactttggctccaccacacctggcaccaacatcaagctctac
aacaagatcacgtcccgcctggctgatgtcttcaaccagcgatgtgaagtgaaccgccgt
gcatcggtcagtggctgcgtcatcaacacgtgcggctgggtgaagggctcaggctaccag
gcactggtgcacgccgcctcggcgtttgaggtagacgtggtggtggtgctggaccaggaa
cggctctacaatgagcttaagagggacctaccccactttgtgcgcactgttctgctcccc
aaatccggcggggtggtggagcgctccaaagacttcaggcgggagtgccgagatgatcgc
atcagggaatatttctatggcttccggggctgcttctacccccacgcctttgacgtcaag
ttctctgatgttaagatctacaaggtgggggctcccaccatccccgactcctgcctgccg
ctgggcatgtcgcaggaggacaaccagttgaagctggtgcccgtgacgccagggcgggac
atggtgcaccacctgttgagcgtcagcatggccgacagccccgacgacaacatctcagag
accagcgtggctggcttcatcgtggtcaccggcgtagacctggagcgccaggtcttcact
gtgctctcgcctgcccctcgcccactgcccaagaacttcctcctcatcatggacatccgc
ttcatggacctgaagtag
DBGET
integrated database retrieval system
