Gavialis gangeticus (Gharial): 109286934
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Entry
109286934 CDS
T07453
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04510
Focal adhesion
ggn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109286934 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109286934 (LAMC1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
109286934
NCBI-ProteinID:
XP_019357296
LinkDB
All DBs
Position
Unknown
AA seq
1574 aa
AA seq
DB search
MDECAEERSGRAQRCMPEFVNAAFNRTVAATNTCGSPAEEYCVQTGVTGVTKSCHLCDAA
QPHLRHGAAFLTDYNNQADTTWWQSQTMLAGVQYPSTINLTLHLGKAFDITYVRLKFHTS
RPESFAIYKRTKEDGPWIPYQYYSGSCENTYQKINRGFIRTGEDEQQALCTDEFSDISPL
TGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVSLNRLNTFGDEVFNDPKVLKSYYY
AISDFAVGGRCKCNGHASECMKNEFGKLSCVCKHNTFGVDCEKCLPFYNDRPWRRATAES
ASECLPCNCNGRSQECYFDPELYRSTGHGGHCVGCLDNTDGANCERCRENFYRLGSEEAC
LPCNCNPVGSVSTQCDNYGRCSCKSGVMGDKCDRCRPGFHSLSEAGCRPCSCNTAGSTDD
CSIETGRCTCKDNVEGFNCERCKPGFFSLDPANPRGCNPCFCFGHSSVCTNAIGYSVYSI
TSNFQFGEDEWRAEQQDGSEILLQWSAETQDISVTSDSYFPIYFVAPGKFLGNQVLSYGQ
NLTFSFRVDRRDTRLSAEDLVLEGADFRVSVPLIAQGNSYPSENTLKYTFRLHEATDYPW
RPALTSFEFQKLLHNLTSIKIRGTYSERNAGYLDDVTIVSARPGPGAPAAWVESCTCPAG
YEGQICEHCAPGYRRETPSLGPYSSCVLCTCNGHSETCDPETGACDCRHNTAGPHCEKCS
EGYYGDATAGTSSDCQPCPCPGGSSCAVVPKTKEVVCTNCPSGVTGKRCELCDDGYFGDP
LSEYGAGRPCRLCQCNDNVDPNAVGNCNRQTGECLKCIYNTAGFYCDRCKVGFFGNPLAP
NPESKCKACNCNRYGTVKQQTSCSQVTGQCECLPHVIERDCSACEPGFYNLQSGQGCERC
DCHALGSTNGQCDIQTGQCECQPGITGQRCERCEVNHFGFGPEGCKPCDCDPEGSRALQC
KEDGRCACKEGFVGNRCDQCEENYFYNRSWPGCQECPACYRLVKDKVAEQREKLEELENL
IANLGTGEETVTDQAFEDRLKEVEREVMDLLEDAQSSKDVDQDLMDRLRHINSTLASQLD
RLRNIQNTVRETDGLAKQARERVQDTEDLIEIASSMLEKAQMAVANVSISPTDTSSDSNN
MTVLAGEARELAERHKQEADEIVRVAKAANDTSTEAYQLLLKTLAGGNQTAKDIDELNRK
YNQAKNISRDLEKQANKVLAEAEEAGNKALQIYANLTSLPVVDSRSLENEANKIKKEAEE
LDQLIDRKLKDYEDLREDMKGKELEVKNLLEKGKTEQQTADQLLARADAAKALAEEAAKK
GNNTLQEANNILSNLRDFDKRVNDNKTAAEEALKKIPAITQTIAEANNKTRQAELALGNA
AADAREAKNKADDAEKIANSVQKNADSTKSDADKTFSDATELAREVDDMMKQLQDAEKEL
KRKQEDANRDMMLAGMASQAAQDAEDNARKAKNSVNNLLTIINELLDQLGQLDTVDLNKL
NEIEGTLNSAKDQMKDSELDRKVSFLEKEARKQDDAIQAYNRDIEEILKDINNLEDIKKT
LPSGCFNTPSIEKP
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtgcgcggaggagcggagcgggcgggcgcagcgctgcatgcccgagttcgtc
aacgccgccttcaaccgcaccgtggcggccaccaacacgtgcggctcgccggccgaggag
tactgcgtgcagaccggcgtcaccggggtcaccaagtcttgccacctgtgcgacgccgcc
cagccccacctgcgccacggcgccgccttcctcaccgactacaacaaccaggccgacacc
acctggtggcagagccagaccatgctggccggggtgcagtaccccagcaccatcaacctc
accctgcacctcggaaaggcctttgacattacatatgtgcgcctgaagtttcataccagt
cggcctgagagctttgccatctacaagcgcacaaaggaggatgggccatggataccttac
caatattatagcggctcctgtgaaaatacatatcagaaaattaacagagggtttatccgg
actggggaggatgagcagcaggcactctgcacagatgagttcagtgacatctctcctctc
acagggggtaatgtggctttttcaacattggaggggcgacccagtgcctacaactttgat
aacagtcctgtgttacaggaatgggtgacggctactgacatcagagtgtcccttaatcgc
ctgaacacctttggagatgaagtttttaatgacccgaaagtgctcaagtcttattattat
gcaatttctgattttgctgtaggtggcaggtgtaaatgtaatggccatgcaagcgagtgt
atgaagaatgagtttgggaagctgtcttgtgtctgcaaacacaatacatttggggtagac
tgtgagaagtgccttcctttctacaatgaccggccatggagaagagcaacagcagaaagt
gccagtgaatgcttgccctgtaactgcaatgggcggtctcaggaatgttattttgatcct
gagctgtaccgttctacgggtcatggtggccattgtgtaggctgcttggataacactgat
ggggccaactgtgaaaggtgccgggaaaacttctaccgccttggaagtgaggaagcatgt
ctcccatgtaactgtaaccctgttggctccgtcagcacacagtgtgataattatggtcgc
tgcagctgcaaatctggtgtaatgggtgataaatgtgaccgatgtcggccagggttccac
tctctctcagaggctgggtgcaggccgtgttcttgtaatactgctggtagcacagatgac
tgcagcattgaaacagggcgctgtacctgcaaggacaacgtggaaggattcaactgtgag
agatgtaaacctgggtttttcagtctggatccagcaaatcctaggggctgtaacccttgt
ttctgttttggacactcctcagtctgcacgaatgccattggctacagtgtctacagcatc
acctccaacttccagtttggtgaggatgagtggcgtgccgaacaacaagatggctctgaa
atattactccagtggagtgctgagacccaggacatctcagttacctcagacagctatttc
cctatctattttgttgcaccaggcaagttcttgggtaaccaggttttgagttatggtcaa
aaccttaccttctccttcagagtagatcggagggacacccgtctgtctgcagaggacctg
gtgcttgaaggggctgactttagagtgtctgtgcctcttattgctcagggcaactcttat
ccgagtgagaacacactgaaatacaccttcagacttcatgaggcaacagattacccgtgg
agaccagctcttacctcttttgagtttcaaaaactgcttcacaacttgacttctatcaag
atccgtggaacgtacagtgagagaaatgctggctacctggatgatgtcacaattgtgagt
gctcgtccagggcctggagccccagcagcatgggtggagagctgtacctgcccagcagga
tatgaaggacaaatttgtgagcactgtgccccaggttacaggagggagactcctagcctt
gggccatacagttcatgtgtactgtgcacctgcaatgggcacagtgagacatgtgatcca
gagactggtgcatgtgactgcaggcataacacagcaggtcctcactgtgaaaagtgcagt
gagggatattatggtgatgcaactgcaggcacttcctctgactgtcagccatgtccgtgt
ccaggaggctcaagctgtgccgtagtgcctaagacaaaagaggtggtatgcacgaattgt
ccttctggtgtcacaggtaaaagatgtgagttatgtgatgatggctattttggagaccct
cttagtgaatacggtgctggaaggccttgccgtctctgtcagtgcaatgacaacgttgat
cccaatgccgtgggaaactgtaacagacaaacaggtgaatgcctgaaatgcatctacaac
acagctggcttctactgtgaccgctgcaaagttgggttctttgggaaccccttagctcca
aaccctgagagcaagtgcaaagcttgcaattgtaatcgttacggcacggtgaaacagcag
acaagctgcagtcaagtaactggacagtgtgagtgcctgccacatgtcatagagagggac
tgtagtgcctgtgagcctggcttctacaacctccagagtggacagggctgtgagaggtgt
gactgccatgcactgggttccactaatggtcagtgtgacatacagactgggcagtgtgaa
tgtcagccaggcatcactggtcagcgctgtgagagatgtgaggtcaaccactttggattt
ggaccagaaggctgcaaaccatgcgactgtgatcctgagggttctcgcgctctgcagtgt
aaggaagatggtcgctgcgcatgtaaggaaggcttcgtggggaaccggtgtgaccagtgt
gaagagaactatttctacaatcggtcttggcctggctgtcaggagtgccctgcatgctac
aggctagtgaaagataaggtggcagaacaaagagagaagttggaagaactggaaaatctt
atagcaaacctaggtacaggagaagaaactgtgacagaccaggcctttgaggacaggctg
aaggaggtagagagagaggtcatggatttgcttgaagacgcacagagcagcaaagatgtg
gatcaagatctgatggatcgtcttagacacattaacagcactctggcaagccagctcgac
agattacggaacatccagaacacagtgcgagaaacagatggccttgctaagcaagcccgt
gaacgagtgcaggatactgaggacctgattgaaatagcttccagtatgctagaaaaggca
caaatggcagttgccaatgtgtccattagcccgacagacacaagcagtgactctaacaac
atgactgtcttggcaggagaggcccgtgaattggctgaacgacacaagcaagaagctgat
gagattgtgcgtgtagccaaggcagcgaatgatacatcaacagaggcatatcaactgctg
ttgaagacactggctggagggaaccaaacagcaaaagatattgatgagcttaacaggaag
tataatcaggcaaagaacatttctcgagaccttgaaaaacaggccaataaagttctggca
gaggcagaggaagctggtaataaggcccttcagatctatgctaatctcaccagtctacct
gtggtggattccaggagtctagagaatgaggcaaataagatcaagaaggaagcagaggag
ctggatcagctaattgacaggaagttgaaggactatgaagatttgagagaggatatgaaa
gggaaggagctggaagtgaagaacctcttagagaaaggaaaaactgagcaacagactgca
gaccaactcttggcccgagcagatgctgccaaagctctggctgaagaagctgccaagaaa
ggcaataacacgctacaagaagccaacaacattctcagcaacctgagagatttcgataag
cgtgtgaacgataacaagacagcagctgaggaggcattgaaaaagattcctgccattacc
cagaccattgctgaagccaacaataagacacggcaagcagagctagcacttggcaatgcg
gctgctgatgctagggaagccaagaacaaagcagatgatgctgagaaaattgctaattct
gtccagaagaatgctgacagcacaaaatctgatgccgacaagactttctctgatgcgaca
gaactggccagagaagtagatgacatgatgaaacagcttcaagatgcagagaaagagctg
aagaggaagcaggaagatgccaaccgtgatatgatgctggcagggatggcttcacaggct
gcccaagatgcagaagacaatgcaagaaaagcaaagaactcagtgaataacttgcttacc
atcattaatgaacttctggatcaactaggacaactggacacagtggacttgaataaactg
aatgagattgagggtacactgaacagtgccaaagatcagatgaaagatagtgagcttgat
cgaaaagtgtctttcctggagaaggaagccaggaagcaagacgatgccattcaggcttac
aacagggacattgaagaaatcctgaaagacattaacaacttggaagacattaagaagaca
ttgccatctggttgtttcaacaccccgtccattgaaaaaccctaa
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integrated database retrieval system