Gavialis gangeticus (Gharial): 109293298
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Entry
109293298 CDS
T07453
Symbol
SMG8
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109293298 (SMG8)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
109293298 (SMG8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
109293298
NCBI-ProteinID:
XP_019366685
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MAAPVSLRELLQSAEPAAAGEEELCVVGIFGKTALQLCSEKAALVSTVCDRQVFPLFQRD
EAAGAGGALADYNQLQAYHSADSKVLYLVLSSICDAPQLLRACRELGPPGPGQLPHAEAH
ELWKQQEKLHCLSLLYLFSVCHVLLLAHPTCAFDITYDRVFRALDGLRQKVLPSLKAAIK
DCPVGKEWKLNCRPCPPRLLFLFQLNGALKVDPPPGRGQDPCAHLEKPPPKKHSPKRRLQ
HALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVAGGPQDGEDPVAVLLEQLRSNC
TTREAENLLAPTLSGPRRYQMMRHGRQQLSFHAESSSSSSSSSGQLVDCTLKEFLWQHVE
LVLSKKGFDDSVGRNPQPSHFELPTYQKWVATAQKLYEVTIEGKDDDPASLTGELSSKIM
GSIKVLEGYLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHA
RGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHLLPKSGEKPEADRNPPVL
YHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQALEEKCCGKLEHINFPVFQPSTPD
PAPAKNESSPAPPEGEVEKLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPADPQGGGDN
AEAHGQGGESKSEKRPSLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKAYN
FHTGLDQQGFIPGTNYLMPWDIAIRTRPEEEGDLDTNSWPAPNKAVPGKRSAVVMGRGRR
RDDMARAFVGFEYEDARGRRFMCSGPDKVMKVMGGGPKESAIKALNSDMPLYILSSTQGR
GLKPHYAQFMRLFVVVPDAPLQIILTPQVQPGPPPCPVFYPEKQEITLPADGLWVLRFPY
AYVTERGPCFPPKENQQLMSYKVLRGILKAVTQ
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtgagcctgcgggagctgctgcagagcgcggagccggcggcggcgggc
gaggaggagctgtgcgtggtgggcatcttcggcaagacggcgctgcagctgtgctccgag
aaggcggcgctggtgagcaccgtgtgcgaccgccaggtcttcccgctcttccagcgggac
gaggcggccggggccgggggagccctcgcggactacaaccagctgcaggcctaccacagc
gcggacagcaaggtgctgtacctggtgctaagctccatctgcgacgcgccgcagctgctg
cgggcctgccgcgaactgggcccgccgggccccgggcagctgccgcatgccgaggcacac
gagctgtggaagcagcaggagaagctgcactgcctgagtctgctctacctcttctccgtg
tgccacgtgctgctgctggcacaccccacctgcgccttcgacatcacctacgaccgcgtc
ttccgggcgctcgacggcctgcgccagaaagtgctgcccagcctcaaggctgccatcaag
gactgccccgtgggtaaggagtggaagctgaactgccggccctgccctccccgcctgctc
ttcctcttccagctcaacggggccctcaaggtggacccccctcccggccgcggccaggac
ccctgcgcccacttggagaagccgccgcccaagaagcactcgcccaagcggcggctgcag
cacgcgctggaggaccagatctaccgcatcttccgcaagagccgggtgctgaccaaccag
agcatcaactgcctcttcaccgtgcccgccaaccaggccttcgtctacattgtggccggc
gggccgcaggatggcgaggaccccgtggccgtgctgctggagcagctccggagcaactgc
accacacgggaggcggagaacctgctggcgcccaccctgtcggggccgcggcggtaccag
atgatgaggcacggccggcagcagctgtccttccacgccgagagcagcagctccagctcc
agctcctccgggcagctggtggactgcaccctcaaggagttcctgtggcagcacgtggag
ctggtgctcagcaagaaaggcttcgacgacagcgtggggaggaacccccagccctcccac
ttcgagctcccgacctaccagaagtgggtggccaccgcgcagaaattatacgaggtgacc
atcgaggggaaagacgacgacccggcctctctcacaggggagctgagctccaaaatcatg
ggcagcatcaaagtcttggaagggtatctcgacatcgacaccaagttttctgaaaaccgg
tgccagaaggcccttcccatggcccacagtgcttaccagtccaacctgccccataactac
accatgacagtccacaaaaatcagctggcacaggctttgcgggtgtacagccagcatgcc
cggggaccagcctttcacaagtacgccatgcagcttcatgaagactgttacaagttctgg
agcaacgggcatcagctgtgcgaggagcgaagcttaacagaccagcactgcgtgcacaaa
ttccacttgcttccaaaatcaggggaaaaaccagaagcagatagaaatcctccggtgtta
tatcacaacagccgggctcgttcaactggcgcctgtaattgtggaaggaaacaagcaccc
cgggatgatccctttgatatcaaagcagctaattatgacttctaccaggcactggaagaa
aaatgctgcgggaaactggagcacatcaacttcccagtatttcagccaagtaccccagat
ccagcacctgccaagaatgagtcatcccctgcccctccagagggagaagttgaaaaactt
aaagaaaaagagcctcaaacgcaaggagagagcaccagcttgagtttagcccttagtcta
ggccagtcgacagacagccttggcacctacccagctgatcctcaaggtggaggagacaat
gcagaagcccatgggcaaggaggagaatctaaaagtgagaaaaggccaagcctagtagat
cgccaggcgtccactgtggagtatctccctggcatgcttcattctaattgccctaagggc
cttctgcccaaattctccagctggtccttggtcaaacttggccctgctaaggcttacaac
ttccacacaggcttagaccagcaaggcttcatcccaggaacaaactacctaatgccttgg
gacattgccatccggacaagacctgaagaagagggagatctagacaccaattcctggcct
gctccgaataaggctgttcctggcaaaagaagtgcggttgtaatgggtaggggaagacgg
agagatgacatggctcgagcctttgtcgggttcgaatacgaagatgcacgtggccgaagg
ttcatgtgttcagggcctgataaagtcatgaaggtgatgggaggtggccctaaagaatcc
gctatcaaagcccttaattcggacatgcccttatacatcctgtcatcaacccaggggcga
ggactaaaaccccactacgctcagttcatgagactcttcgttgtggtaccagatgctcca
ttgcagataatactgacacctcaggttcagccagggcctccaccttgtcctgtattttat
cctgagaaacaggaaataaccctgccagctgatggactgtgggtgctgcgcttcccctat
gcttatgttacagagcgtgggccctgtttccctcccaaagaaaaccagcagttaatgagt
tacaaggttctccggggaattctgaaagccgtcactcagtga
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